RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 GLAP06280 429 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 INHBBP09529 407 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 RPS2P15880 293 aaKnown RBP18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 IL2RGP31785 369 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 MNDAP41218 407 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 LSAMPQ13449 338 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 IL18Q14116 193 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 HACD4Q5VWC8 232 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 FAM131AQ6UXB0 335 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 SNX29P2Q8IUI4 249 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 FOXC2Q99958 501 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 FAM234AQ9H0X4 552 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 SLC25A10Q9UBX3 287 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 PCDHB10Q9UN67 800 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 DSCAML1Q8TD84 2053 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 IGHV2-5P01817 119 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 CSN2P05814 226 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 NEK7Q8TDX7 302 aa18.09■□□□□ 0.49
PDLIM3-203ENST00000284771 SERPINE3A8MV23 424 aa18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 H3BUI4 141 aa18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 SSX5O60225 188 aa18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 GSTP1P09211 210 aaKnown RBP18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 GUCA2AQ02747 115 aa18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 RBM39Q14498 530 aaKnown RBP18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 SPANXN2Q5MJ10 180 aa18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 RSBN1Q5VWQ0 802 aaPredicted RBP18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 SHEQ5VZ18 495 aa18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 WFDC11Q8NEX6 87 aa18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 NUDCD2Q8WVJ2 157 aa18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 NEIL1Q96FI4 390 aaPredicted RBP18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 ETAA1Q9NY74 926 aa18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 ABCA2Q9BZC7 2435 aa18.08■□□□□ 0.48
PDLIM3-203ENST00000284771 MYO9AB2RTY4 2548 aa18.07■□□□□ 0.48
PDLIM3-203ENST00000284771 SETXQ7Z333 2677 aaKnown RBP18.07■□□□□ 0.48
PDLIM3-203ENST00000284771 MGST3O14880 152 aa18.07■□□□□ 0.48
PDLIM3-203ENST00000284771 NDUFB3O43676 98 aa18.07■□□□□ 0.48
PDLIM3-203ENST00000284771 GLIPR1P48060 266 aa18.07■□□□□ 0.48
PDLIM3-203ENST00000284771 ZNF497Q6ZNH5 498 aa18.07■□□□□ 0.48
PDLIM3-203ENST00000284771 GAPTQ8N292 157 aa18.07■□□□□ 0.48
PDLIM3-203ENST00000284771 OR5D13Q8NGL4 314 aa18.07■□□□□ 0.48
PDLIM3-203ENST00000284771 Q96MF0 132 aa18.07■□□□□ 0.48
PDLIM3-203ENST00000284771 AKAP9Q99996 3911 aa18.07■□□□□ 0.48
PDLIM3-203ENST00000284771 NAPSAO96009 420 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 SLC25A16P16260 332 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 PAX5Q02548 391 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 EDDM3AQ14507 147 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 LRRC10Q5BKY1 277 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 WDR25Q64LD2 544 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 OR8B3Q8NGG8 313 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 OR8B2Q96RD0 313 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 MEX3AA1L020 520 aaKnown RBP18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 PHF1O43189 567 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 TPPPO94811 219 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 MT-ND4P03905 459 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 NDUFB7P17568 137 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 PYHIN1Q6K0P9 492 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 NLRC3Q7RTR2 1065 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 PPP1R35Q8TAP8 253 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 MRPL30Q8TCC3 161 aaKnown RBP18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 SDHCQ99643 169 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 CMSS1Q9BQ75 279 aaKnown RBP18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 DCTN5Q9BTE1 182 aa18.06■□□□□ 0.48
PDLIM3-203ENST00000284771 YLPM1P49750 1951 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 ITPR3Q14573 2671 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 TRAV39A0A0B4J263 110 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 ZFP36P26651 326 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 KCNJ3P48549 501 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 ARFRP1Q13795 201 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 ARL6IP1Q15041 203 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 PNLIPRP3Q17RR3 467 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 KRBOX4Q5JUW0 171 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 GDPD3Q7L5L3 318 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 OR4K15Q8NH41 348 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 SRRQ9GZT4 340 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 CLN8Q9UBY8 286 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 ZNF230Q9UIE0 474 aaPredicted RBP18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 KIF25Q9UIL4 384 aa18.05■□□□□ 0.48
PDLIM3-203ENST00000284771 SVEP1Q4LDE5 3571 aa18.04■□□□□ 0.48
PDLIM3-203ENST00000284771 MEIS3P1A6NDR6 274 aa18.04■□□□□ 0.48
PDLIM3-203ENST00000284771 CA11O75493 328 aa18.04■□□□□ 0.48
PDLIM3-203ENST00000284771 PRSS3P35030 304 aa18.04■□□□□ 0.48
PDLIM3-203ENST00000284771 EDDM3BP56851 147 aa18.04■□□□□ 0.48
PDLIM3-203ENST00000284771 DGCR2P98153 550 aa18.04■□□□□ 0.48
PDLIM3-203ENST00000284771 ZNF45Q02386 682 aa18.04■□□□□ 0.48
PDLIM3-203ENST00000284771 SLC35E4Q6ICL7 350 aa18.04■□□□□ 0.48
PDLIM3-203ENST00000284771 BAIAP2L2Q6UXY1 529 aa18.04■□□□□ 0.48
PDLIM3-203ENST00000284771 C5orf24Q7Z6I8 188 aa18.04■□□□□ 0.48
PDLIM3-203ENST00000284771 FAM157AC9JC47 383 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 RNF223E7ERA6 249 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 USF1P22415 310 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 ERP29P30040 261 aaKnown RBP18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 GNG2P59768 71 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 RNASE12Q5GAN4 147 aaKnown RBP18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 TCF23Q7RTU1 214 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 GVQW1Q8N7I0 195 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 OR52I2Q8NH67 350 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 GPX8Q8TED1 209 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 CCDC107Q8WV48 283 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 SSBP3Q9BWW4 388 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 REG4Q9BYZ8 158 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms