RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CCDC54Q8NEL0 328 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 NAA60Q9H7X0 242 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 ELL3Q9HB65 397 aaPredicted RBP15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 WFDC1Q9HC57 220 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 KCNJ16Q9NPI9 418 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 TRAV20A0A0B4J274 112 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 CRYGSP22914 178 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 C1QL4Q86Z23 238 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 ZFP62Q8NB50 900 aaPredicted RBP15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 BSCL2Q96G97 398 aaPredicted RBP15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 Q96M66 194 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 C20orf24Q9BUV8 137 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 PRRG4Q9BZD6 226 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 SMDT1Q9H4I9 107 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 MIOXQ9UGB7 285 aa15.79■□□□□ 0.12
PDLIM3-201ENST00000284767 CST2P09228 141 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 IL13RA2Q14627 380 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 FAM24BQ8N5W8 94 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 SUCNR1Q9BXA5 334 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 NECAP2Q9NVZ3 263 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 H7C1Q1 480 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 PRH1P02810 166 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 TMEM225BP0DP42 221 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 DAOP14920 347 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 GABRR1P24046 479 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 CD82P27701 267 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 SLC10A1Q14973 349 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 RAB35Q15286 201 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 OR1F12Q8NHA8 337 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 SGK3Q96BR1 496 aa15.78■□□□□ 0.12
PDLIM3-201ENST00000284767 CLN5O75503 358 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 ZNF728P0DKX0 622 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 NQO2P16083 231 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 HTR5AP47898 357 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 NUBP1P53384 320 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 ABCA11PQ4W5N1 156 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 HPSE2Q8WWQ2 592 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 SPTSSAQ969W0 71 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 WNT5BQ9H1J7 359 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 TMPRSS5Q9H3S3 457 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 SPRR3Q9UBC9 169 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 PIGLQ9Y2B2 252 aa15.77■□□□□ 0.12
PDLIM3-201ENST00000284767 IGKV3D-15A0A087WSY6 115 aa15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 SYNGR4O95473 234 aa15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 IFNA17P01571 189 aa15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 OR5AC1P0C628 307 aa15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 DTYMKP23919 212 aa15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 NOVA1P51513 510 aaKnown RBP15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 CLINT1Q14677 625 aa15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 RIPPLY2Q5TAB7 128 aa15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 ADAM5Q6NVV9 412 aa15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 CLEC9AQ6UXN8 241 aa15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 CD300LFQ8TDQ1 290 aa15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 HDHD3Q9BSH5 251 aaPredicted RBP15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 HSF4Q9ULV5 492 aa15.77■□□□□ 0.11
PDLIM3-201ENST00000284767 IGHV2-70P01814 119 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 DUSP1P28562 367 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 FHITP49789 147 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 TNFSF10P50591 281 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 ZNF565Q8N9K5 539 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 RTN4IP1Q8WWV3 396 aaPredicted RBP15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 PIGTQ969N2 578 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 C18orf12Q96KH6 178 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 OR2H1Q9GZK4 316 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 LIME1Q9H400 295 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 CUL9Q8IWT3 2517 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 LCATP04180 440 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 CHATP28329 748 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 RRADP55042 308 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 ARF1P84077 181 aaKnown RBP15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 LIAT1Q6ZQX7 453 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 NUFIP2Q7Z417 695 aaKnown RBP15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 TMEM45BQ96B21 275 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 TINAGQ9UJW2 476 aa15.76■□□□□ 0.11
PDLIM3-201ENST00000284767 DSPP15924 2871 aaKnown RBP15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 A0A1W2PPE2 198 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 ZNF503-AS2A6NEH8 195 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 MSTNO14793 375 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 TXNL1O43396 289 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 ARG1P05089 322 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 CPEB3Q8NE35 698 aaKnown RBP15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 RSRP1Q9BUV0 290 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 FBXO7Q9Y3I1 522 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 OR6C6A6NF89 314 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 ZNF850A8MQ14 1090 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 ST8SIA3O43173 380 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 DIRAS3O95661 229 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 CCL2P13500 99 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 OR2B8PP59922 312 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 SP6Q3SY56 376 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 IGSF11Q5DX21 431 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 LYZL2Q7Z4W2 148 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 TOMM40LQ969M1 308 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 SH3BGRL3Q9H299 93 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 C12orf49Q9H741 205 aa15.75■□□□□ 0.11
PDLIM3-201ENST00000284767 XRCC2O43543 280 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 YPEL4Q96NS1 127 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 METTL9Q9H1A3 318 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 AK3Q9UIJ7 227 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 ZDHHC8Q9ULC8 765 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms