RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 TRDCB7Z8K6 153 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 FAM3BP58499 235 aaPredicted RBP7.77□□□□□ -1.17
NIPBL-201ENST00000282516 FAHD1Q6P587 224 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 PLEKHB1Q9UF11 243 aaPredicted RBP7.77□□□□□ -1.17
NIPBL-201ENST00000282516 LGALS3P17931 250 aaKnown RBP7.77□□□□□ -1.17
NIPBL-201ENST00000282516 FBXL6Q8N531 539 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.77□□□□□ -1.17
NIPBL-201ENST00000282516 CDC14BO60729 498 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 HPXP02790 462 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 CTF1Q16619 201 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 MUC20Q8N307 709 aaPredicted RBP7.77□□□□□ -1.17
NIPBL-201ENST00000282516 ADAMTS17Q8TE56 1095 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 MRGPRX3Q96LB0 322 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 SLC52A3Q9NQ40 469 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 MTFP1Q9UDX5 166 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 COL16A1Q07092 1604 aaPredicted RBP7.77□□□□□ -1.17
NIPBL-201ENST00000282516 PKDREJQ9NTG1 2253 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 DLK1P80370 383 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 GUCA2AQ02747 115 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 TIMP4Q99727 224 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 CXXC4Q9H2H0 198 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 NBASA2RRP1 2371 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 GABRA1P14867 456 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 CA6P23280 308 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 CCL17Q92583 94 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 UBE2FQ969M7 185 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 ABHD14AQ9BUJ0 271 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 FUT9Q9Y231 359 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 HIGD1AQ9Y241 93 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 RBFOX2O43251 390 aaKnown RBP eCLIP7.76□□□□□ -1.17
NIPBL-201ENST00000282516 ASCL3Q9NQ33 180 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 PDLIM7Q9NR12 457 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 VAX2Q9UIW0 290 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 FAM157AC9JC47 383 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 PSG5Q15238 335 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 SSX8Q7RTT4 187 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 OR8D4Q8NGM9 314 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 GFYI3L273 518 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 COMPP49747 757 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-201ENST00000282516 HTRA3P83110 453 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 COL19A1Q14993 1142 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 TCTN3Q6NUS6 607 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 WDFY1Q8IWB7 410 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 OR4B1Q8NGF8 309 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 FOXB1Q99853 325 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 LIPGQ9Y5X9 500 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 KCPQ6ZWJ8 1503 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 AESQ08117 197 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 CCDC144NLQ6NUI1 221 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 BEND2Q8NDZ0 799 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 Q8WTZ3 238 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 LINC00052Q96N35 136 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 SAP30LQ9HAJ7 183 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 MRPL58Q14197 206 aaKnown RBP7.76□□□□□ -1.17
NIPBL-201ENST00000282516 FAM53AQ6NSI3 398 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-201ENST00000282516 DIRC2Q96SL1 478 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 SLC16A13Q7RTY0 426 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 FGF14Q92915 247 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 P2RX4Q99571 388 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 C6orf106Q9H6K1 298 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-201ENST00000282516 CDAP32320 146 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 ID4P47928 161 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 PARM1Q6UWI2 310 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 LINC00596Q86U02 117 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 MRGPRDQ8TDS7 321 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 SIRT5Q9NXA8 310 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 MTCH2Q9Y6C9 303 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 TMEM202A6NGA9 273 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 ALG1L2C9J202 215 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 CTAG2O75638 210 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 PDCD11Q14690 1871 aaKnown RBP7.76□□□□□ -1.17
NIPBL-201ENST00000282516 ZNF77Q15935 545 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 TM4SF20Q53R12 229 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 SLC35E3Q7Z769 313 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 VN1R17PQ8TDU5 208 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 ZNF707Q96C28 371 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-201ENST00000282516 MMP17Q9ULZ9 603 aa7.76□□□□□ -1.17
NIPBL-201ENST00000282516 A0A0B4J2E0 115 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 A0A1B0GX12 115 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 PTOV1Q86YD1 416 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 ZNF383Q8NA42 475 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 ROM1Q03395 351 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 EBLN2Q6P2I7 272 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 OR5M9Q8NGP3 310 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 GUCD1Q96NT3 240 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 UBTD1Q9HAC8 227 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 GPR27Q9NS67 375 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 FAM181BA6NEQ2 426 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 K7ESM1 405 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 FAM157CP0CG43 387 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 ECSCRQ19T08 205 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 ETFBKMTQ8IXQ9 262 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 GLRX2Q9NS18 164 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 DOCK1Q14185 1865 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 CD3EP07766 207 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 MNX1P50219 401 aaPredicted RBP7.75□□□□□ -1.17
NIPBL-201ENST00000282516 TMEM33P57088 247 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 BVESQ8NE79 360 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 SLC25A40Q8TBP6 338 aa7.75□□□□□ -1.17
NIPBL-201ENST00000282516 SSMEM1Q8WWF3 244 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms