RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 HS3ST6Q96QI5 342 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 SMDT1Q9H4I9 107 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 DMDP11532 3685 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 HIST1H2BKO60814 126 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 TRGC2P03986 189 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 HIST1H2BJP06899 126 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 HIST1H2BOP23527 126 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 HIST1H2BBP33778 126 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 HIST1H2BDP58876 126 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 HIST1H2BCP62807 126 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 HIST2H2BEQ16778 126 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 HIST2H2BFQ5QNW6 126 aaPredicted RBP23.66■■□□□ 1.38
CBX4-201ENST00000269397 TMEM211Q6ICI0 200 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 HIST1H2BHQ93079 126 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 CPNE4Q96A23 557 aaPredicted RBP23.66■■□□□ 1.38
CBX4-201ENST00000269397 HIST1H2BNQ99877 126 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 HIST1H2BMQ99879 126 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 SLC25A31Q9H0C2 315 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 UNKLQ9H9P5 680 aaKnown RBP23.66■■□□□ 1.38
CBX4-201ENST00000269397 TMEM38BQ9NVV0 291 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 CHST1O43916 411 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 FUT6P51993 359 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 DSCR4P56555 118 aaPredicted RBP23.66■■□□□ 1.38
CBX4-201ENST00000269397 RPL23AP62750 156 aaKnown RBP23.66■■□□□ 1.38
CBX4-201ENST00000269397 AKR1C8PQ5T2L2 129 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 CCDC74BQ96LY2 380 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 NIPSNAP3BQ9BS92 247 aa23.66■■□□□ 1.38
CBX4-201ENST00000269397 A0A087WZY1 265 aa23.65■■□□□ 1.38
CBX4-201ENST00000269397 hCG_38984A0A1B0GV85 526 aa23.65■■□□□ 1.38
CBX4-201ENST00000269397 SLC34A2O95436 690 aa23.65■■□□□ 1.38
CBX4-201ENST00000269397 SPINK2P20155 84 aa23.65■■□□□ 1.38
CBX4-201ENST00000269397 EXTL1Q92935 676 aa23.65■■□□□ 1.38
CBX4-201ENST00000269397 SRFP11831 508 aa23.65■■□□□ 1.38
CBX4-201ENST00000269397 YRDCQ86U90 279 aaKnown RBP23.65■■□□□ 1.38
CBX4-201ENST00000269397 CACNA1EQ15878 2313 aa23.64■■□□□ 1.38
CBX4-201ENST00000269397 CMTM1Q8IZ96 169 aa23.64■■□□□ 1.38
CBX4-201ENST00000269397 IL22RA1Q8N6P7 574 aa23.64■■□□□ 1.38
CBX4-201ENST00000269397 TVP23CQ96ET8 276 aa23.64■■□□□ 1.38
CBX4-201ENST00000269397 TMEM56Q96MV1 263 aa23.64■■□□□ 1.38
CBX4-201ENST00000269397 SIGLEC12Q96PQ1 595 aa23.64■■□□□ 1.38
CBX4-201ENST00000269397 GPR61Q9BZJ8 451 aa23.64■■□□□ 1.38
CBX4-201ENST00000269397 CALHM2Q9HA72 323 aa23.64■■□□□ 1.38
CBX4-201ENST00000269397 IL36RNQ9UBH0 155 aa23.64■■□□□ 1.38
CBX4-201ENST00000269397 TMEM56-RWDD3S4R434 201 aa23.64■■□□□ 1.38
CBX4-201ENST00000269397 OR6C6A6NF89 314 aa23.64■■□□□ 1.37
CBX4-201ENST00000269397 RPS18P62269 152 aaKnown RBP23.64■■□□□ 1.37
CBX4-201ENST00000269397 CLDND2Q8NHS1 167 aa23.64■■□□□ 1.37
CBX4-201ENST00000269397 FSCN3Q9NQT6 498 aa23.64■■□□□ 1.37
CBX4-201ENST00000269397 CCL28Q9NRJ3 127 aa23.64■■□□□ 1.37
CBX4-201ENST00000269397 FRYQ5TBA9 3013 aa23.64■■□□□ 1.37
CBX4-201ENST00000269397 WRBO00258 174 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 IGHV3-9P01782 118 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 EXT1Q16394 746 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 ZNF600Q6ZNG1 722 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 ZNF729A6NN14 1252 aaPredicted RBP23.63■■□□□ 1.37
CBX4-201ENST00000269397 SOD3P08294 240 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 CST2P09228 141 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 SRPXP78539 464 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 IZUMO4Q1ZYL8 232 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 C17orf78Q8N4C9 275 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 SPIN2AQ99865 258 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 SPIN2BQ9BPZ2 258 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 WNT5BQ9H1J7 359 aa23.63■■□□□ 1.37
CBX4-201ENST00000269397 TOX3O15405 576 aaPredicted RBP23.62■■□□□ 1.37
CBX4-201ENST00000269397 CEACAM16Q2WEN9 425 aa23.62■■□□□ 1.37
CBX4-201ENST00000269397 MRPL14Q6P1L8 145 aaKnown RBP23.62■■□□□ 1.37
CBX4-201ENST00000269397 INTS12Q96CB8 462 aaKnown RBP23.62■■□□□ 1.37
CBX4-201ENST00000269397 GNG13Q9P2W3 67 aa23.62■■□□□ 1.37
CBX4-201ENST00000269397 ZNF732B4DXR9 585 aa23.62■■□□□ 1.37
CBX4-201ENST00000269397 TK1P04183 234 aa23.62■■□□□ 1.37
CBX4-201ENST00000269397 HERPUD1Q15011 391 aa23.62■■□□□ 1.37
CBX4-201ENST00000269397 C4orf17Q53FE4 359 aa23.62■■□□□ 1.37
CBX4-201ENST00000269397 ZNF506Q5JVG8 444 aa23.62■■□□□ 1.37
CBX4-201ENST00000269397 IL36GQ9NZH8 169 aa23.62■■□□□ 1.37
CBX4-201ENST00000269397 BTBD17A6NE02 478 aa23.61■■□□□ 1.37
CBX4-201ENST00000269397 EDN3P14138 238 aa23.61■■□□□ 1.37
CBX4-201ENST00000269397 BCL3P20749 454 aa23.61■■□□□ 1.37
CBX4-201ENST00000269397 THNSL2Q86YJ6 484 aa23.61■■□□□ 1.37
CBX4-201ENST00000269397 PLPPR1Q8TBJ4 325 aa23.61■■□□□ 1.37
CBX4-201ENST00000269397 RHOVQ96L33 236 aa23.61■■□□□ 1.37
CBX4-201ENST00000269397 OR2H1Q9GZK4 316 aa23.61■■□□□ 1.37
CBX4-201ENST00000269397 KIAA1549Q9HCM3 1950 aa23.61■■□□□ 1.37
CBX4-201ENST00000269397 HSPB1P04792 205 aaKnown RBP23.61■■□□□ 1.37
CBX4-201ENST00000269397 KLK3P07288 261 aaPredicted RBP23.61■■□□□ 1.37
CBX4-201ENST00000269397 RAC1P63000 192 aa23.61■■□□□ 1.37
CBX4-201ENST00000269397 NMSQ5H8A3 153 aa23.61■■□□□ 1.37
CBX4-201ENST00000269397 SNIP1Q8TAD8 396 aaKnown RBP23.61■■□□□ 1.37
CBX4-201ENST00000269397 A0A087WWC5 75 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 A0A0G2JMM0 328 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 A0A1W2PPB8 328 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 A0A1W2PRS3 328 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 SLC22A20A6NK97 555 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 KIR3DP1A8MWS1 328 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 C3orf80F5H4A9 247 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 HLA-HP01893 362 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 OR8B8Q15620 311 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 SP5Q6BEB4 398 aaPredicted RBP23.6■■□□□ 1.37
CBX4-201ENST00000269397 SLC23A3Q6PIS1 610 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 AAED1Q7RTV5 226 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 NEK7Q8TDX7 302 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms