RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SLC33A1O00400 549 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-201ENST00000269318 OR2H2O95918 312 aa14.08□□□□□ -0.16
CCDC40-201ENST00000269318 ZNF44P15621 663 aa14.08□□□□□ -0.16
CCDC40-201ENST00000269318 CYCSP99999 105 aaKnown RBP14.08□□□□□ -0.16
CCDC40-201ENST00000269318 GALNT14Q96FL9 552 aa14.08□□□□□ -0.16
CCDC40-201ENST00000269318 NAA60Q9H7X0 242 aa14.08□□□□□ -0.16
CCDC40-201ENST00000269318 SLC2A9Q9NRM0 540 aa14.08□□□□□ -0.16
CCDC40-201ENST00000269318 C1orf123Q9NWV4 160 aa14.08□□□□□ -0.16
CCDC40-201ENST00000269318 TREM2Q9NZC2 230 aa14.08□□□□□ -0.16
CCDC40-201ENST00000269318 SHANK1Q9Y566 2161 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 A0A0G2JNJ9 132 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 TEX13DA0A0J9YY54 714 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-201ENST00000269318 M0R1B8 84 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 NXPH2O95156 264 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 BMP5P22003 454 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 PSMB6P28072 239 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 RBMXP38159 391 aaKnown RBP14.07□□□□□ -0.16
CCDC40-201ENST00000269318 HERV-K104P61576 105 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 ZNF345Q14585 488 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 SPIN3Q5JUX0 258 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 SHEQ5VZ18 495 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 RGS7BPQ6MZT1 257 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-201ENST00000269318 SPERTQ8NA61 448 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 RTN4IP1Q8WWV3 396 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-201ENST00000269318 SNRNP40Q96DI7 357 aaKnown RBP14.07□□□□□ -0.16
CCDC40-201ENST00000269318 MUCL1Q96DR8 90 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 OR10C1Q96KK4 312 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 MSL2Q9HCI7 577 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 Q9UFV3 132 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 TUSC2O75896 110 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 TK1P04183 234 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 MDH2P40926 338 aaKnown RBP14.07□□□□□ -0.16
CCDC40-201ENST00000269318 TMPRSS3P57727 454 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 FAM27E3Q08E93 113 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 IL15RAQ13261 267 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 ABCA11PQ4W5N1 156 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 PRR30Q53SZ7 412 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-201ENST00000269318 GFRALQ6UXV0 394 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 GAPTQ8N292 157 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 PIGMQ9H3S5 423 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 TMEM165Q9HC07 324 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 RASL12Q9NYN1 266 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 UBQLN2Q9UHD9 624 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 MAB21L2Q9Y586 359 aa14.07□□□□□ -0.16
CCDC40-201ENST00000269318 TRBV6-7A0A0A0MS04 114 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 RPS10-NUDT3A0A1W2PQS6 291 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 RNF222A6NCQ9 220 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 POM121CA8CG34 1229 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 SIRPB1O00241 398 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 RP2O75695 350 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 CTXN2P0C2S0 81 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 FAM87AP0C7U9 286 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 KCNJ3P48549 501 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 NKX6-1P78426 367 aaPredicted RBP14.06□□□□□ -0.16
CCDC40-201ENST00000269318 PHLDA2Q53GA4 152 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 PAN3Q58A45 887 aaKnown RBP14.06□□□□□ -0.16
CCDC40-201ENST00000269318 C1QTNF12Q5T7M4 302 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 PCSK4Q6UW60 755 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 ZNF826PQ6ZT77 177 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 C22orf34Q6ZV56 151 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 OR8H3Q8N146 312 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 KCNRGQ8N5I3 272 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 OR5T2Q8NGG2 359 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 C2orf50Q96LR7 162 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 METTL8Q9H825 291 aaKnown RBP14.06□□□□□ -0.16
CCDC40-201ENST00000269318 MBD2Q9UBB5 411 aa14.06□□□□□ -0.16
CCDC40-201ENST00000269318 A0A0D9SG52 128 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 BET1O15155 118 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 OR2F2O95006 317 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 ZNF250P15622 560 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 RCC1P18754 421 aaPredicted RBP14.05□□□□□ -0.16
CCDC40-201ENST00000269318 CCKARP32238 428 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 AP2S1P53680 142 aaPredicted RBP14.05□□□□□ -0.16
CCDC40-201ENST00000269318 OR2F1Q13607 317 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 TMEM187Q14656 261 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 PRAMEF6Q5VXH4 476 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 WDR82Q6UXN9 313 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 ZNF497Q6ZNH5 498 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 MRGPRGQ86SM5 289 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 OR11L1Q8NGX0 322 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 THAP6Q8TBB0 222 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 PLPPR1Q8TBJ4 325 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 RNF126Q9BV68 326 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 KCNIP3Q9Y2W7 256 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 SH2D1BO14796 132 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 CRYAAP02489 173 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 HOXB5P09067 269 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 OR5AC1P0C628 307 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 GNRHRP30968 328 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 GLRXP35754 106 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 HLA-DRB3P79483 266 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 ATXN7L3Q14CW9 347 aaPredicted RBP14.05□□□□□ -0.16
CCDC40-201ENST00000269318 ALKBH2Q6NS38 261 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 ACOT7LQ6ZUV0 252 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 LRP11Q86VZ4 500 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 OR4A4PQ8NGN8 299 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 ASF1BQ9NVP2 202 aa14.05□□□□□ -0.16
CCDC40-201ENST00000269318 H0YIZ8 118 aa14.04□□□□□ -0.16
CCDC40-201ENST00000269318 WNT9BO14905 357 aa14.04□□□□□ -0.16
CCDC40-201ENST00000269318 DIRAS3O95661 229 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms