RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ERGIC1Q969X5 290 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 LIME1Q9H400 295 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 ZNF69Q9UC07 566 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 MEIKINA0A087WXM9 373 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 SIAH2O43255 324 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 EGR1P18146 543 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 AGAP20933 346 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 GNLYP22749 145 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 TNFSF4P23510 183 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 ZBTB25P24278 435 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 SERPINF1P36955 418 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 ECI1P42126 302 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 NPY4RP50391 375 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 HOXA4Q00056 320 aaPredicted RBP13.77□□□□□ -0.21
TPM1-201ENST00000267996 C4orf46Q504U0 113 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 ZNF497Q6ZNH5 498 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 C20orf204Q6ZNR8 217 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 C17orf107Q6ZR85 190 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 MOGAT3Q86VF5 341 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 ZNF808Q8N4W9 903 aaPredicted RBP13.77□□□□□ -0.21
TPM1-201ENST00000267996 GCSAMQ8N6F7 178 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 Q8TCH9 128 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 DHRS9Q9BPW9 319 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 C5orf66Q9H5L9 145 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 NPTNQ9Y639 398 aa13.77□□□□□ -0.21
TPM1-201ENST00000267996 KIR2DS1A0A191URI9 304 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 TUBAL3A6NHL2 446 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 C17orf100A8MU93 164 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 TRDCB7Z8K6 153 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 H7C1Q1 480 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 LOXP28300 417 aaPredicted RBP13.76□□□□□ -0.21
TPM1-201ENST00000267996 KIR2DS4P43632 304 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 UQCRFS1P47985 274 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 UBE2MP61081 183 aaKnown RBP13.76□□□□□ -0.21
TPM1-201ENST00000267996 DHODHQ02127 395 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 DHRS2Q13268 280 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 KIR2DS1Q14954 304 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 ADAD2Q8NCV1 583 aaKnown RBP13.76□□□□□ -0.21
TPM1-201ENST00000267996 PLPPR1Q8TBJ4 325 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 ZNF2Q9BSG1 426 aaPredicted RBP13.76□□□□□ -0.21
TPM1-201ENST00000267996 GCM1Q9NP62 436 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 RNF115Q9Y4L5 304 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 HCFC1P51610 2035 aa13.76□□□□□ -0.21
TPM1-201ENST00000267996 RFPL4AA6NLU0 287 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 RFPL4AL1F8VTS6 287 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 FABP7O15540 132 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 PSPNO60542 156 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 CEBPDP49716 269 aaPredicted RBP13.75□□□□□ -0.21
TPM1-201ENST00000267996 TAS2R31P59538 309 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 EFNB3Q15768 340 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 NEUROG1Q92886 237 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 DMRTB1Q96MA1 342 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 RTBDNQ9BSG5 229 aaPredicted RBP13.75□□□□□ -0.21
TPM1-201ENST00000267996 TMEM204Q9BSN7 226 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 TRAF4Q9BUZ4 470 aaPredicted RBP13.75□□□□□ -0.21
TPM1-201ENST00000267996 OR14J1Q9UGF5 321 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 IGSF10Q6WRI0 2623 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 RELNP78509 3460 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 CACNA1BQ00975 2339 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 DEFB108AA8MXU0 73 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 PSG2P11465 335 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 APOBEC3AP31941 199 aaPredicted RBP13.75□□□□□ -0.21
TPM1-201ENST00000267996 KCNJ3P48549 501 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 ZFP69Q49AA0 526 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 MOB1BQ7L9L4 216 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 LYG2Q86SG7 212 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 ITLN2Q8WWU7 325 aaPredicted RBP13.75□□□□□ -0.21
TPM1-201ENST00000267996 TMEM230Q96A57 120 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 WIPI2Q9Y4P8 454 aa13.75□□□□□ -0.21
TPM1-201ENST00000267996 CACNA1DQ01668 2161 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 C9orf170A2RU37 121 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 M0R233 179 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 SCTP09683 121 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 CTXN2P0C2S0 81 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 ANXA3P12429 323 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 TLE1Q04724 770 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 PPP1R1AQ13522 171 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 HERPUD1Q15011 391 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 MST1LQ2TV78 715 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 IGSF11Q5DX21 431 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 FAM209AQ5JX71 171 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 CD177Q8N6Q3 437 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 DRAXINQ8NBI3 349 aaPredicted RBP13.74□□□□□ -0.21
TPM1-201ENST00000267996 OR2AK2Q8NG84 335 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 LILRB1Q8NHL6 650 aaPredicted RBP13.74□□□□□ -0.21
TPM1-201ENST00000267996 FAM222BQ8WU58 562 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 MBNL3Q9NUK0 354 aaKnown RBP13.74□□□□□ -0.21
TPM1-201ENST00000267996 RNF7Q9UBF6 113 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 MGAT4AQ9UM21 535 aa13.74□□□□□ -0.21
TPM1-201ENST00000267996 IGKV1D-17A0A075B6S4 117 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 IGKV1-6A0A0C4DH72 117 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 CLDN14O95500 239 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 PLAUP00749 431 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 C1QBP02746 253 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 RCC1P18754 421 aaPredicted RBP13.73□□□□□ -0.21
TPM1-201ENST00000267996 FCGR2CP31995 323 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 PRDX2P32119 198 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 RBMXP38159 391 aaKnown RBP13.73□□□□□ -0.21
TPM1-201ENST00000267996 GLP1RP43220 463 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 OR3A1P47881 315 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms