RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 BHLHE23Q8NDY6 225 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 KLF14Q8TD94 323 aaPredicted RBP11.12□□□□□ -0.63
SGCA-201ENST00000262018 ASB13Q8WXK3 278 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 TAF15Q92804 592 aaKnown RBP eCLIP11.12□□□□□ -0.63
SGCA-201ENST00000262018 MCUBQ9NWR8 336 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 KCNK7Q9Y2U2 307 aa11.12□□□□□ -0.63
SGCA-201ENST00000262018 FAM172BPA6NC97 362 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 MEIS3P1A6NDR6 274 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 CA11O75493 328 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 PLATP00750 562 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 AKAIN1P0CW23 69 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 KITLGP21583 273 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 GCH1P30793 250 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 MECP2P51608 486 aaKnown RBP11.11□□□□□ -0.63
SGCA-201ENST00000262018 TAS2R19P59542 299 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 GNG3P63215 75 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 PSG7Q13046 419 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 MAB21L1Q13394 359 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 ZMYND11Q15326 602 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 RGS7BPQ6MZT1 257 aaPredicted RBP11.11□□□□□ -0.63
SGCA-201ENST00000262018 TRAPPC6BQ86SZ2 158 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 ARHGAP5-AS1Q96IT6 56 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 PECRQ9BY49 303 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 ANAPC10Q9UM13 185 aa11.11□□□□□ -0.63
SGCA-201ENST00000262018 A0A0B4J293 547 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 DNAJC9-AS1A6NH13 148 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 SSX5O60225 188 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 CD74P04233 296 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 SFTPBP07988 381 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 CA6P23280 308 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 COL8A2P25067 703 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 BLVRBP30043 206 aaPredicted RBP11.1□□□□□ -0.63
SGCA-201ENST00000262018 MPV17P39210 176 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 HAAOP46952 286 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 CCR6P51684 374 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 GNG2P59768 71 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 LMO4P61968 165 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 SRSF4Q08170 494 aaKnown RBP11.1□□□□□ -0.63
SGCA-201ENST00000262018 ZNF718Q3SXZ3 478 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 ATAD3CQ5T2N8 411 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 METTL11BQ5VVY1 283 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 MBNL2Q5VZF2 373 aaKnown RBP11.1□□□□□ -0.63
SGCA-201ENST00000262018 ELP2Q6IA86 826 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 STEAP1BQ6NZ63 245 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 SLC25A26Q70HW3 274 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 RTN4RL2Q86UN3 420 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 ZNF573Q86YE8 665 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 MKXQ8IYA7 352 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 OSR2Q8N2R0 312 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 OR4C16Q8NGL9 310 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 NUDCD2Q8WVJ2 157 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 ST8SIA4Q92187 359 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 DVL3Q92997 716 aaPredicted RBP11.1□□□□□ -0.63
SGCA-201ENST00000262018 ST6GAL2Q96JF0 529 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 FAM210AQ96ND0 272 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 RTL8AQ9BWD3 113 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 PKIBQ9C010 78 aa11.1□□□□□ -0.63
SGCA-201ENST00000262018 GPN1Q9HCN4 374 aaPredicted RBP11.1□□□□□ -0.63
SGCA-201ENST00000262018 PURGQ9UJV8 347 aaKnown RBP11.1□□□□□ -0.63
SGCA-201ENST00000262018 SERPINE3A8MV23 424 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 PEX14O75381 377 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 C1QBP02746 253 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 CD3DP04234 171 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 ZNF250P15622 560 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 NAT1P18440 290 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 TBPP20226 339 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 MDKP21741 143 aaPredicted RBP11.09□□□□□ -0.63
SGCA-201ENST00000262018 MPZP25189 248 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 CBX5P45973 191 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 SELENOVP59797 346 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 ALKBH6Q3KRA9 238 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM76BQ5HYJ3 339 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 SFRP4Q6FHJ7 346 aaPredicted RBP11.09□□□□□ -0.63
SGCA-201ENST00000262018 SIGIRRQ6IA17 410 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 OR8G5Q8NG78 346 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 MICU1Q9BPX6 476 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 OCSTAMPQ9BR26 566 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 MED28Q9H204 178 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 OR51I2Q9H344 312 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 NUDT15Q9NV35 164 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 HSF4Q9ULV5 492 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 ALG5Q9Y673 324 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 WNK2Q9Y3S1 2297 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 IGLV3-9A0A075B6K5 115 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A10PA6NDY2 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A18PA6NE21 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A16PA6NEW6 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A20PA6NIJ5 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A8PA6NJQ4 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A7PA6NKC0 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A22PA8MWA6 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A12PA8MX19 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A5PA8MXJ8 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A23PA8MXZ1 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 RGS13O14921 159 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 PPIHO43447 177 aaKnown RBP11.09□□□□□ -0.63
SGCA-201ENST00000262018 CYB5AP00167 134 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 H2AFB2P0C5Z0 115 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A15PP0C7V4 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A13PP0C7W8 464 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms