RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 MARS2Q96GW9 593 aaKnown RBP11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 CABLES2Q9BTV7 478 aa11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 GOLGA4Q13439 2230 aaKnown RBP11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 KIR3DL2P43630 455 aa11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 DHRS7BQ6IAN0 325 aaPredicted RBP11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 ZNF770Q6IQ21 691 aaPredicted RBP11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 OR1L8Q8NGR8 309 aa11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 SLC6A13Q9NSD5 602 aa11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 ZNF727A8MUV8 499 aa11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 H3BP45 60 aa11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 SYNGR1O43759 233 aa11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 OR4C16Q8NGL9 310 aa11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 DUX5Q96PT3 197 aa11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 NRXN2Q9P2S2 1712 aa11.85□□□□□ -0.51
PDGFRB-201ENST00000261799 TMEM229AB2RXF0 380 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 CYB5R3P00387 301 aaPredicted RBP11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 REG1BP48304 166 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 FAM27BQ5VT28 67 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 RNASE6Q93091 150 aaKnown RBP11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 VSIG4Q9Y279 399 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 DTX4Q9Y2E6 619 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 XIRP1Q702N8 1843 aaKnown RBP11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 H7BYZ3 331 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 NCR3LG1Q68D85 454 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 UNQ5815/PRO19632Q6UWF5 114 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 CALHM1Q8IU99 346 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 NTNG2Q96CW9 530 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 METTL26Q96S19 204 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 KPTNQ9Y664 436 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 LIPFP07098 398 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 ATP5G2Q06055 141 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 PJVKQ0ZLH3 352 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 RPUSD3Q6P087 351 aaKnown RBP11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 OR8G5Q8NG78 346 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 RHOFQ9HBH0 211 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 METTL1Q9UBP6 276 aaKnown RBP11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 YTHDF2Q9Y5A9 579 aaKnown RBP11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 KIAA0100Q14667 2235 aaKnown RBP11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 J3KRW8 73 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 GEMIN2O14893 280 aaKnown RBP11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 SS18L1O75177 396 aaPredicted RBP11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 IGHA1P01876 353 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 IGHA2P01877 340 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 UBE2MP61081 183 aaKnown RBP11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 SCARB1Q8WTV0 552 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 MARC2Q969Z3 335 aa11.84□□□□□ -0.51
PDGFRB-201ENST00000261799 SNRPGP15A8MWD9 76 aa11.83□□□□□ -0.51
PDGFRB-201ENST00000261799 M6PRP20645 277 aa11.83□□□□□ -0.51
PDGFRB-201ENST00000261799 TBR1Q16650 682 aa11.83□□□□□ -0.51
PDGFRB-201ENST00000261799 OR8I2Q8N0Y5 310 aa11.83□□□□□ -0.51
PDGFRB-201ENST00000261799 OR4A4PQ8NGN8 299 aa11.83□□□□□ -0.51
PDGFRB-201ENST00000261799 RPS4Y2Q8TD47 263 aa11.83□□□□□ -0.51
PDGFRB-201ENST00000261799 SLC7A10Q9NS82 523 aa11.83□□□□□ -0.51
PDGFRB-201ENST00000261799 IGLV3-19P01714 112 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 HOXA6P31267 233 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 PSG4Q00888 419 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 CTDSP1Q9GZU7 261 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 RPL36A-HNRNPH2H7BZ11 118 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 PLPP2O43688 288 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 CHST1O43916 411 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 CEACAM21Q3KPI0 293 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 RNFT1Q5M7Z0 435 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 SNX22Q96L94 193 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 SLC25A32Q9H2D1 315 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 IL19Q9UHD0 177 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 METRNQ9UJH8 293 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 KLK13Q9UKR3 277 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 IGHV3OR16-10A0A075B7F0 116 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 ERVFC1-1P60608 527 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 C16orf82Q7Z2V1 217 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 MYPOPQ86VE0 399 aaPredicted RBP11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 OR4X2Q8NGF9 303 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 WASHC3Q9Y3C0 194 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 OR51B2Q9Y5P1 312 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 OR2T8A6NH00 312 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 HTR1DP28221 377 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 TFPI2P48307 235 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 GAMTQ14353 236 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 NSUN5P2Q63ZY6 315 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 OR5AP2Q8NGF4 316 aa11.83□□□□□ -0.52
PDGFRB-201ENST00000261799 TPPP2P59282 170 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 PDZK1IP1Q13113 114 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 TIMP4Q99727 224 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 RNF167Q9H6Y7 350 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 FAM181BA6NEQ2 426 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 NQO2P16083 231 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 MMP15P51511 669 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 H3F3CQ6NXT2 135 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 FA2HQ7L5A8 372 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 OR52M1Q8NGK5 317 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 SLC2A8Q9NY64 477 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 SFT2D2O95562 160 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 DCTDP32321 178 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 SP6Q3SY56 376 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 TBC1D26Q86UD7 250 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 IDI2-AS1Q9NZ38 188 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 MRM2Q9UI43 246 aaKnown RBP11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 NEU3Q9UQ49 428 aa11.82□□□□□ -0.52
PDGFRB-201ENST00000261799 TXNDC12O95881 172 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms