RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 H3BQ15 152 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 PITX3O75364 302 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 IGKV1-13P0DP09 117 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 FGF5P12034 268 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 CXCL12P48061 93 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 C9orf135Q5VTT2 229 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 ZNF100Q8IYN0 542 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 CPEB3Q8NE35 698 aaKnown RBP16.64■□□□□ 0.25
SCARB1-201ENST00000261693 ABHD3Q8WU67 409 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 TCTEX1D2Q8WW35 142 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 LYRM2Q9NU23 88 aaPredicted RBP16.64■□□□□ 0.25
SCARB1-201ENST00000261693 F10P00742 488 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 CCL2P13500 99 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 MLF1P58340 268 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 OR8B8Q15620 311 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 HLA-BQ31612 363 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 WIPI1Q5MNZ9 446 aaPredicted RBP16.64■□□□□ 0.25
SCARB1-201ENST00000261693 ODF3L1Q8IXM7 274 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 AGBL5Q8NDL9 886 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 OR10D3Q8NH80 312 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 IFI44Q8TCB0 444 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 CRIM1Q9NZV1 1036 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 URGCP-MRPS24S4R325 110 aa16.64■□□□□ 0.25
SCARB1-201ENST00000261693 TK1P04183 234 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 EIF2S3P41091 472 aaKnown RBP16.63■□□□□ 0.25
SCARB1-201ENST00000261693 TSC22D1Q15714 1073 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 ACER2Q5QJU3 275 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 ZNF343Q6P1L6 599 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 P4HA3Q7Z4N8 544 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 M1APQ8TC57 530 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 RAB39BQ96DA2 213 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 MALSU1Q96EH3 234 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 ZNF845Q96IR2 970 aaPredicted RBP16.63■□□□□ 0.25
SCARB1-201ENST00000261693 GPR35Q9HC97 309 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 RPL36A-HNRNPH2H7BZ11 118 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 YIF1AO95070 293 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 IFNA17P01571 189 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 STARD6P59095 220 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 RAB1AP62820 205 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 SRPXP78539 464 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 ZNF154Q13106 437 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 LYSMD4Q5XG99 296 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 HEPN1Q6WQI6 88 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 TMEM56Q96MV1 263 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 TCEAL7Q9BRU2 100 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 TMEM56-RWDD3S4R434 201 aa16.63■□□□□ 0.25
SCARB1-201ENST00000261693 A0A1B0GW64 132 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 TAGLN2P37802 199 aaKnown RBP16.62■□□□□ 0.25
SCARB1-201ENST00000261693 HAAOP46952 286 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 GPM6AP51674 278 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 HERPUD1Q15011 391 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 HIKESHIQ53FT3 197 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 FAM209BQ5JX69 171 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 NEK7Q8TDX7 302 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 YPEL4Q96NS1 127 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 CCL28Q9NRJ3 127 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 PLSCR2Q9NRY7 297 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 C9J4A7 227 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 IL11RAQ14626 422 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 CYB561D1Q8N8Q1 229 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 SLC25A31Q9H0C2 315 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 UBE2ZQ9H832 354 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-201ENST00000261693 ZNF391Q9UJN7 358 aa16.62■□□□□ 0.25
SCARB1-201ENST00000261693 TRBV23-1A0A0A0MS06 115 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 SLC22A20A6NK97 555 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 C3orf80F5H4A9 247 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 HSPA12AO43301 675 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 CHST1O43916 411 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 P04436 131 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 RD3LP0DJH9 198 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 CLDN15P56746 228 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 UBE2KP61086 200 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 KIAA0141Q14154 515 aaPredicted RBP16.61■□□□□ 0.25
SCARB1-201ENST00000261693 FAM185AQ8N0U4 392 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 OR56B2PQ8NGI1 322 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 MUCL1Q96DR8 90 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 SPIN2AQ99865 258 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 SPIN2BQ9BPZ2 258 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 FAM86C1Q9NVL1 165 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 DIDO1Q9BTC0 2240 aaKnown RBP16.61■□□□□ 0.25
SCARB1-201ENST00000261693 MUC3AQ02505 3323 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 H3BP45 60 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 PPIHO43447 177 aaKnown RBP16.61■□□□□ 0.25
SCARB1-201ENST00000261693 SRD5A2P31213 254 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 RPS18P62269 152 aaKnown RBP16.61■□□□□ 0.25
SCARB1-201ENST00000261693 CPNE4Q96A23 557 aaPredicted RBP16.61■□□□□ 0.25
SCARB1-201ENST00000261693 SIGLEC12Q96PQ1 595 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 FGF23Q9GZV9 251 aaPredicted RBP16.61■□□□□ 0.25
SCARB1-201ENST00000261693 OR51M1Q9H341 326 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 Q9N2K0 584 aa16.61■□□□□ 0.25
SCARB1-201ENST00000261693 A0A096LPE4 126 aa16.6■□□□□ 0.25
SCARB1-201ENST00000261693 A0A1W2PPZ6 126 aa16.6■□□□□ 0.25
SCARB1-201ENST00000261693 SRP19P09132 144 aaKnown RBP16.6■□□□□ 0.25
SCARB1-201ENST00000261693 PCBD1P61457 104 aa16.6■□□□□ 0.25
SCARB1-201ENST00000261693 WDR5BQ86VZ2 330 aa16.6■□□□□ 0.25
SCARB1-201ENST00000261693 IL22RA1Q8N6P7 574 aa16.6■□□□□ 0.25
SCARB1-201ENST00000261693 EDARADDQ8WWZ3 215 aa16.6■□□□□ 0.25
SCARB1-201ENST00000261693 DLK1P80370 383 aa16.6■□□□□ 0.25
SCARB1-201ENST00000261693 ZNF429Q86V71 674 aa16.6■□□□□ 0.25
SCARB1-201ENST00000261693 OR2Y1Q8NGV0 311 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms