RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 MCEMP1Q8IX19 187 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 DTD1Q8TEA8 209 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 ZNF501Q96CX3 271 aaPredicted RBP10.1□□□□□ -0.79
SOX9-201ENST00000245479 RBM14Q96PK6 669 aaKnown RBP10.1□□□□□ -0.79
SOX9-201ENST00000245479 RASL10BQ96S79 203 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 ELOVL1Q9BW60 279 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 MOB1AQ9H8S9 216 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 FKBP11Q9NYL4 201 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 C19orf25Q9UFG5 118 aaPredicted RBP10.1□□□□□ -0.79
SOX9-201ENST00000245479 SRPK3Q9UPE1 567 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 OBSL1O75147 1896 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 ZNF816-ZNF321PA0A0X1KG74 233 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 LILRA5A6NI73 299 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 MS4A18H0YCH9 400 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 AGAP20933 346 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 GALNSP34059 522 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 RPS23P62266 143 aaKnown RBP10.1□□□□□ -0.79
SOX9-201ENST00000245479 ZNF92Q03936 586 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 BAXQ07812 192 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 PNRC1Q12796 327 aaPredicted RBP10.1□□□□□ -0.79
SOX9-201ENST00000245479 MS4A18Q3C1V0 323 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.1□□□□□ -0.79
SOX9-201ENST00000245479 SPINK14Q6IE38 97 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 KDF1Q8NAX2 398 aaPredicted RBP10.1□□□□□ -0.79
SOX9-201ENST00000245479 OR10AD1Q8NGE0 317 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 SH3BGRL3Q9H299 93 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 SERTAD4Q9NUC0 356 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 FUT9Q9Y231 359 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 TMED3Q9Y3Q3 217 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 COL4A4P53420 1690 aaPredicted RBP10.1□□□□□ -0.79
SOX9-201ENST00000245479 SPG11Q96JI7 2443 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 ANKUB1A6NFN9 424 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 RPLP1P05386 114 aaKnown RBP10.1□□□□□ -0.79
SOX9-201ENST00000245479 KRTDAPP60985 99 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 ACOT6Q3I5F7 207 aaPredicted RBP10.1□□□□□ -0.79
SOX9-201ENST00000245479 OR5AS1Q8N127 324 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 FAAP24Q9BTP7 215 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 ARV1Q9H2C2 271 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 DCAF16Q9NXF7 216 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 TIMM10BQ9Y5J6 103 aa10.1□□□□□ -0.79
SOX9-201ENST00000245479 TRAV34A0A0B4J273 112 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 PMS2P1A4D2B8 440 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 F8VVB4 439 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 F8VWA3 439 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 TCF21O43680 179 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 PTTG1IPP53801 180 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 CLN3Q13286 438 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 TMEM241Q24JQ0 296 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 MYPOPQ86VE0 399 aaPredicted RBP10.09□□□□□ -0.79
SOX9-201ENST00000245479 ZNF611Q8N823 705 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 ERGIC1Q969X5 290 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 TUBA4BQ9H853 241 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 ZDHHC11Q9H8X9 412 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 DEDDO75618 318 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 CTSDP07339 412 aaPredicted RBP10.09□□□□□ -0.79
SOX9-201ENST00000245479 HOXC4P09017 264 aaPredicted RBP10.09□□□□□ -0.79
SOX9-201ENST00000245479 ZNF708P17019 499 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 HIST1H3AP68431 136 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 PMP22Q01453 160 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 EWSR1Q01844 656 aaKnown RBP eCLIP10.09□□□□□ -0.79
SOX9-201ENST00000245479 DEGS2Q6QHC5 323 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 OR8B12Q8NGG6 310 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 OR13G1Q8NGZ3 307 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 AQP3Q92482 292 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 RAB24Q969Q5 203 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 PTX4Q96A99 478 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 GCM1Q9NP62 436 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 KIAA1456Q9P272 454 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 MGAQ8IWI9 3026 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 ALPK3Q96L96 1907 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 C20orf202A1L168 122 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 PRR19A6NJB7 356 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 IL2RAP01589 272 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 RND3P61587 244 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 RPS16P62249 146 aaKnown RBP10.09□□□□□ -0.79
SOX9-201ENST00000245479 RUNX1Q01196 453 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 LTC4SQ16873 150 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 ZNF468Q5VIY5 522 aaPredicted RBP10.09□□□□□ -0.79
SOX9-201ENST00000245479 ZNF774Q6NX45 483 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 C1QL2Q7Z5L3 287 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 NINJ1Q92982 152 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 TRAPPC1Q9Y5R8 145 aa10.09□□□□□ -0.79
SOX9-201ENST00000245479 B4DEV8 164 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 AQP7O14520 342 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 IGKV3-11P04433 115 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 DANCRP0C864 163 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 HNF1AP20823 631 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 CHRNA7P36544 502 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 CARD18P57730 90 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 GRB2P62993 217 aaKnown RBP10.08□□□□□ -0.8
SOX9-201ENST00000245479 VAMP3Q15836 100 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 BSXQ3C1V8 233 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 SPNS3Q6ZMD2 512 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.08□□□□□ -0.8
SOX9-201ENST00000245479 BARX1Q9HBU1 254 aaPredicted RBP10.08□□□□□ -0.8
SOX9-201ENST00000245479 THADAQ6YHU6 1953 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 TICRRQ7Z2Z1 1910 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 A0A1W2PR77 199 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 VAX1Q5SQQ9 334 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 BTNL8Q6UX41 500 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms