RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 GLRX2Q9NS18 164 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 PLPP3O14495 311 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 ADAM11O75078 769 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 CRISP2P16562 243 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 HTR1DP28221 377 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 FGF9P31371 208 aaPredicted RBP6.64□□□□□ -1.35
RIF1-201ENST00000243326 CXCL12P48061 93 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 PRSS3P2Q8NHM4 247 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 OR4C12Q96R67 309 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 OR6C3Q9NZP0 311 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 MRPS18BQ9Y676 258 aaKnown RBP6.64□□□□□ -1.35
RIF1-201ENST00000243326 PIEZO1Q92508 2521 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 TRPM3Q9HCF6 1732 aaPredicted RBP6.64□□□□□ -1.35
RIF1-201ENST00000243326 OR3A1P47881 315 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 PAX5Q02548 391 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 EMC4Q5J8M3 183 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 LHFPL5Q8TAF8 219 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 IL10RAQ13651 578 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 FNDC7Q5VTL7 733 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 CADM4Q8NFZ8 388 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 CYB561P49447 251 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 FUT7Q11130 342 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 FZD5Q13467 585 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 MCHR2Q969V1 340 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 B4DEV8 164 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 SOD3P08294 240 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 ZNF785A8K8V0 405 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 MBPP02686 304 aaPredicted RBP6.63□□□□□ -1.35
RIF1-201ENST00000243326 PPP1CCP36873 323 aaKnown RBP6.63□□□□□ -1.35
RIF1-201ENST00000243326 FGF14Q92915 247 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 MRGPRFQ96AM1 343 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 LYZL6O75951 148 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 IGHV3-48P01763 117 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 UCN2Q96RP3 112 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 GSX1Q9H4S2 264 aaPredicted RBP6.63□□□□□ -1.35
RIF1-201ENST00000243326 NEU3Q9UQ49 428 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 HIST3H3Q16695 136 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 DMKNQ6E0U4 476 aaPredicted RBP6.63□□□□□ -1.35
RIF1-201ENST00000243326 TLNRD1Q9H1K6 362 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 MUC21A0A0G2JKD1 596 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 MUC21A0A140T8X8 626 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 ZFP36L2P47974 494 aaKnown RBP6.63□□□□□ -1.35
RIF1-201ENST00000243326 MUC21Q5SSG8 566 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 KLHDC1Q8N7A1 406 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 OR11G2Q8NGC1 345 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 SIRT7Q9NRC8 400 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 ADAT3Q96EY9 351 aaPredicted RBP6.63□□□□□ -1.35
RIF1-201ENST00000243326 TMED3Q9Y3Q3 217 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 CD40P25942 277 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 NMUP48645 174 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 OR13G1Q8NGZ3 307 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 C11orf94C9JXX5 98 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 AGBL5Q8NDL9 886 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 KCNK7Q9Y2U2 307 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 PLAUP00749 431 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 ZNF32P17041 273 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 TBPP20226 339 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 ZP1P60852 638 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 KRTCAP3Q53RY4 240 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 OR10C1Q96KK4 312 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 EPPINO95925 133 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 GZMMP51124 257 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 SRSF3P84103 164 aaKnown RBP6.63□□□□□ -1.35
RIF1-201ENST00000243326 RTP5Q14D33 572 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 SPRED2Q7Z698 418 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 ZNF547Q8IVP9 402 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 OR10A7Q8NGE5 316 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 OR4P4Q8NGL7 312 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 NEIL1Q96FI4 390 aaPredicted RBP6.63□□□□□ -1.35
RIF1-201ENST00000243326 ZNF275Q9NSD4 429 aaPredicted RBP6.63□□□□□ -1.35
RIF1-201ENST00000243326 P4HTMQ9NXG6 502 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 ST6GALNAC2Q9UJ37 374 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 TPRX1Q8N7U7 411 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 MRGPRX1Q96LB2 322 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 RASL12Q9NYN1 266 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 NAT8Q9UHE5 227 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 HFEQ30201 348 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 PABPC1L2AQ5JQF8 200 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 LEAP2Q969E1 77 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 SLC45A2Q9UMX9 530 aa6.63□□□□□ -1.35
RIF1-201ENST00000243326 C5orf46Q6UWT4 87 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 Q6ZNB5 142 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 DTD1Q8TEA8 209 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 SMIM6P0DI80 62 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 LINC00299Q6ZSB3 139 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 ANKRD55Q3KP44 614 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 ZDHHC8Q9ULC8 765 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 CTSBP07858 339 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 ICAM2P13598 275 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 CCKARP32238 428 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 PRICKLE4Q2TBC4 344 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 SLC25A42Q86VD7 318 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 SEC11CQ9BY50 192 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 BET1LQ9NYM9 111 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 ZNF207O43670 478 aaKnown RBP6.62□□□□□ -1.35
RIF1-201ENST00000243326 MGPP08493 103 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 CT45A10P0DMU9 189 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 DMWDQ09019 674 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 LIAT1Q6ZQX7 453 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 LRRC61Q9BV99 259 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms