RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 HIPK2Q9H2X6 1198 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 ADAMTS20P59510 1910 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 ELOA3CA0A087WX78 387 aaPredicted RBP13.37□□□□□ -0.27
DDX55-201ENST00000238146 TRGC1P0CF51 173 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 FUT3P21217 361 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 RBM11P57052 281 aaKnown RBP13.37□□□□□ -0.27
DDX55-201ENST00000238146 ID3Q02535 119 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 TLE4Q04727 773 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 SPIN3Q5JUX0 258 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 IL22RA1Q8N6P7 574 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 FRZBQ92765 325 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 CPNE4Q96A23 557 aaPredicted RBP13.37□□□□□ -0.27
DDX55-201ENST00000238146 ABHD14BQ96IU4 210 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 OR6C1Q96RD1 312 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 OR5H1A6NKK0 313 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 OR7C1O76099 320 aaPredicted RBP13.36□□□□□ -0.27
DDX55-201ENST00000238146 BAXQ07812 192 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 ZNF154Q13106 437 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 GAMTQ14353 236 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 NMSQ5H8A3 153 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 ZNF818PQ6ZRF7 136 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 OR1F12Q8NHA8 337 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 PLPPR1Q8TBJ4 325 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 CFAP54Q96N23 3096 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.36□□□□□ -0.27
DDX55-201ENST00000238146 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.36□□□□□ -0.27
DDX55-201ENST00000238146 CLEC18AA5D8T8 446 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 CHST1O43916 411 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 SCRG1O75711 98 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 NXPH3O95157 252 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 HBE1P02100 147 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 PATE4P0C8F1 98 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 BATF2Q8N1L9 274 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 CLEC18CQ8NCF0 446 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 NAT6Q93015 286 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 S100PBPQ96BU1 408 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 FAM210BQ96KR6 192 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 LOC102723971A0A1B0GUV8 181 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 PTBP3O95758 552 aaKnown RBP13.36□□□□□ -0.27
DDX55-201ENST00000238146 FUT6P51993 359 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 RAET1LQ5VY80 246 aa13.36□□□□□ -0.27
DDX55-201ENST00000238146 B4DEV8 164 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 TP53I11O14683 189 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 FABP4P15090 132 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 CD200P41217 278 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 PAX9P55771 341 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 TAS2R30P59541 319 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 FAM90A2PQ658T7 463 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 CALHM1Q8IU99 346 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 GAPTQ8N292 157 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 OR10G4Q8NGN3 311 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 UFSP2Q9NUQ7 469 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 CEP290O15078 2479 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 A0A087WZY1 265 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 MMP9P14780 707 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 VDAC1P21796 283 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 NPBWR2P48146 333 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 DPPA3Q6W0C5 159 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 WDR5BQ86VZ2 330 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 GPR137CQ8N3F9 429 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 ATP5SQ99766 215 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 DKKL1Q9UK85 242 aa13.35□□□□□ -0.27
DDX55-201ENST00000238146 hCG_38984A0A1B0GV85 526 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 ZNF32P17041 273 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 RAB11AP62491 216 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 ZNF92Q03936 586 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 DNLZQ5SXM8 178 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 PIGCQ92535 297 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 GNG13Q9P2W3 67 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 RNF115Q9Y4L5 304 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 TRAV1-1A0A0B4J248 108 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 IGKV1D-13A0A0B4J2D9 117 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 OR6C6A6NF89 314 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 ZIC3O60481 467 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 IGKV1-13P0DP09 117 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 UCP1P25874 307 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 NTF4P34130 210 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 RND2P52198 227 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 SSTP61278 116 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 C4orf17Q53FE4 359 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 PLCXD3Q63HM9 321 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 ZNF385CQ66K41 422 aaPredicted RBP13.34□□□□□ -0.27
DDX55-201ENST00000238146 C1orf87Q8N0U7 546 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 SMRP1Q8NCR6 262 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 M1APQ8TC57 530 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 GTF3AQ92664 365 aaKnown RBP13.34□□□□□ -0.27
DDX55-201ENST00000238146 CRLF2Q9HC73 371 aa13.34□□□□□ -0.27
DDX55-201ENST00000238146 PRUNE2Q8WUY3 3088 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 WDR87Q6ZQQ6 2873 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 A0A0J9YW62 118 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 PHOX2AO14813 284 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 TK1P04183 234 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 CELA2AP08217 269 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 CST2P09228 141 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 SCTP09683 121 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 IL24Q13007 206 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 UNQ6494/PRO21346Q6UXR6 183 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 THNSL2Q86YJ6 484 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 CADM4Q8NFZ8 388 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 EXTL1Q92935 676 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms