RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 OR2AE1Q8NHA4 323 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 SNIP1Q8TAD8 396 aaKnown RBP12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 KLHDC7BQ96G42 594 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 GABRG3Q99928 467 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 SYT3Q9BQG1 590 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 TMEM106CQ9BVX2 250 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 AARDQ4LEZ3 155 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 FAM69BQ5VUD6 431 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 ZNHIT1O43257 154 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 IFI6P09912 130 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 TP53RKQ96S44 253 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 NAGKQ9UJ70 344 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 IGHV3-15A0A0B4J1V0 119 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 TRAV34A0A0B4J273 112 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 ZNF814B7Z6K7 855 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 GABRG2P18507 467 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 FBLP22087 321 aaKnown RBP12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 MTCP1P56278 107 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 SSPNQ14714 243 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 ICAM4Q14773 271 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 DTX1Q86Y01 620 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 ZNF573Q86YE8 665 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 OR14L1PQ8NHC6 308 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 PCGF1Q9BSM1 259 aa12.32□□□□□ -0.44
PCDHB3-201ENST00000231130 FRYQ5TBA9 3013 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 ANKUB1A6NFN9 424 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 CEBPZOSA8MTT3 80 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 H3BP45 60 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 ZNF43P17038 809 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 SPINK2P20155 84 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 RAB7AP51149 207 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 FGF8P55075 233 aaPredicted RBP12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 DDIT4LQ96D03 193 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 RBM24Q9BX46 236 aaKnown RBP12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 POLR3KQ9Y2Y1 108 aaPredicted RBP12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 THADAQ6YHU6 1953 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 PTPRSQ13332 1948 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 ST8SIA3O43173 380 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 IGHG1P01857 330 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 HLA-HP01893 362 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 IGHV4-34P06331 123 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 SLC35E3Q7Z769 313 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 OR2J1Q9GZK6 312 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 KIAA1456Q9P272 454 aa12.31□□□□□ -0.44
PCDHB3-201ENST00000231130 H3BMH7 237 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 K7N7A8 449 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 LCATP04180 440 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 PAX1P15863 534 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 CHRNB4P30926 498 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 SLC38A9Q8NBW4 561 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 MRGPRX4Q96LA9 322 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 PATZ1Q9HBE1 687 aaKnown RBP12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 OBP2AQ9NY56 170 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 A0A1B0GUS0 222 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 EFNA2O43921 213 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 SSSCA1O60232 199 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 OPN1MWP04001 364 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 OPN1MW2P0DN77 364 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 OPN1MW3P0DN78 364 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 OR1N1Q8NGS0 311 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 MSL2Q9HCI7 577 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 ANXA10Q9UJ72 324 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 RRP8O43159 456 aaKnown RBP12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 CEACAM8P31997 349 aaPredicted RBP12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 CLDN17P56750 224 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 OR1D5P58170 312 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 PRSS8Q16651 343 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 PRAMEF20Q5VT98 475 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 DOK3Q7L591 496 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 RABEPKQ7Z6M1 372 aa12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 RPUSD4Q96CM3 377 aaKnown RBP12.3□□□□□ -0.44
PCDHB3-201ENST00000231130 H7BYZ3 331 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 BRS3P32247 399 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 GAGE1Q13065 139 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 C1orf194Q5T5A4 169 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 LEMD1Q68G75 181 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 OR1L6Q8NGR2 347 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 RNASEH2CQ8TDP1 164 aaKnown RBP12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 KIAA2026Q5HYC2 2103 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 CRYM-AS1A6NIL9 109 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 HSPB6O14558 160 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 DCAF7P61962 342 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 GNB2P62879 340 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 LGI3Q8N145 548 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 OR1L3Q8NH93 324 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 METTL7AQ9H8H3 244 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 SLC2A9Q9NRM0 540 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 PLEK2Q9NYT0 353 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 WNT16Q9UBV4 365 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 VAX2Q9UIW0 290 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 A0A1W2PNV4 684 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 LIPT2A6NK58 231 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 CYB5R3P00387 301 aaPredicted RBP12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 ENDOGQ14249 297 aaKnown RBP12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 COL5A1-AS1Q5SY13 56 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 PLA2G3Q9NZ20 509 aa12.29□□□□□ -0.44
PCDHB3-201ENST00000231130 CTSDP07339 412 aaPredicted RBP12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 OR10J1P30954 320 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 EWSR1Q01844 656 aaKnown RBP eCLIP12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 ZNF266Q14584 549 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms