RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 PGAM2P15259 253 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 MDH2P40926 338 aaKnown RBP12.59□□□□□ -0.39
CCDC47-201ENST00000225726 SELENOVP59797 346 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 C2orf68Q2NKX9 166 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 TMEM128Q5BJH2 165 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 WDR82Q6UXN9 313 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 ZFAND1Q8TCF1 268 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 RDH5Q92781 318 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 RTBDNQ9BSG5 229 aaPredicted RBP12.59□□□□□ -0.39
CCDC47-201ENST00000225726 CHIAQ9BZP6 476 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 WDR13Q9H1Z4 485 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 DECR2Q9NUI1 292 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 TRIM77I1YAP6 450 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 OR2H2O95918 312 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 IL13RA1P78552 427 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 ZNF826PQ6ZT77 177 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 ASB13Q8WXK3 278 aa12.59□□□□□ -0.39
CCDC47-201ENST00000225726 PLSCR5A0PG75 271 aa12.58□□□□□ -0.39
CCDC47-201ENST00000225726 POM121CA8CG34 1229 aa12.58□□□□□ -0.39
CCDC47-201ENST00000225726 SLC22A5O76082 557 aa12.58□□□□□ -0.39
CCDC47-201ENST00000225726 PTBP3O95758 552 aaKnown RBP12.58□□□□□ -0.39
CCDC47-201ENST00000225726 B2MP61769 119 aa12.58□□□□□ -0.39
CCDC47-201ENST00000225726 CTAG1AP78358 180 aa12.58□□□□□ -0.39
CCDC47-201ENST00000225726 SHEQ5VZ18 495 aa12.58□□□□□ -0.39
CCDC47-201ENST00000225726 MRPL30Q8TCC3 161 aaKnown RBP12.58□□□□□ -0.39
CCDC47-201ENST00000225726 MITD1Q8WV92 249 aa12.58□□□□□ -0.39
CCDC47-201ENST00000225726 TMEM230Q96A57 120 aa12.58□□□□□ -0.39
CCDC47-201ENST00000225726 TREM2Q9NZC2 230 aa12.58□□□□□ -0.39
CCDC47-201ENST00000225726 GLS2Q9UI32 602 aa12.58□□□□□ -0.39
CCDC47-201ENST00000225726 C14orf166Q9Y224 244 aaKnown RBP12.58□□□□□ -0.39
CCDC47-201ENST00000225726 SLC33A1O00400 549 aaPredicted RBP12.58□□□□□ -0.4
CCDC47-201ENST00000225726 SSTR2P30874 369 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 GLP1RP43220 463 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 OR2T35Q8NGX2 323 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 PHB2Q99623 299 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 MRPL37Q9BZE1 423 aaKnown RBP12.58□□□□□ -0.4
CCDC47-201ENST00000225726 TAAR3PQ9P1P4 343 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 SLC23A1Q9UHI7 598 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 KIR2DS1A0A191URI9 304 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 DPRXA6NFQ7 191 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 CCL21O00585 134 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 DUS4LO95620 317 aaKnown RBP12.58□□□□□ -0.4
CCDC47-201ENST00000225726 DNASE1P24855 282 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 KIR2DS4P43632 304 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 GMFBP60983 142 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 BAMBIQ13145 260 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 KIR2DS1Q14954 304 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 PAN3Q58A45 887 aaKnown RBP12.58□□□□□ -0.4
CCDC47-201ENST00000225726 MRPL24Q96A35 216 aaKnown RBP12.58□□□□□ -0.4
CCDC47-201ENST00000225726 UFSP2Q9NUQ7 469 aa12.58□□□□□ -0.4
CCDC47-201ENST00000225726 TRBV23-1A0A0A0MS06 115 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 LEUTXA8MZ59 168 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 SIRPB1O00241 398 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 VAMP1P23763 118 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 ZNF880Q6PDB4 577 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 C11orf88Q6PI97 169 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 ACP7Q6ZNF0 438 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 ELMOD3Q96FG2 381 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 FXYD6Q9H0Q3 95 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 C1orf123Q9NWV4 160 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 TRDCB7Z8K6 153 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 H7C1Q1 480 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 SFT2D2O95562 160 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 HAND1O96004 215 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 CTSDP07339 412 aaPredicted RBP12.57□□□□□ -0.4
CCDC47-201ENST00000225726 H2BFSP57053 126 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 OR10Z1Q8NGY1 313 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 LIME1Q9H400 295 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 NGBQ9NPG2 151 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 MGAT4AQ9UM21 535 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 ATP23Q9Y6H3 246 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 SHANK1Q9Y566 2161 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 ABCD4O14678 606 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 SIX6O95475 246 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 GLRA1P23415 457 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 CHRNB4P30926 498 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 BSPH1Q075Z2 132 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 LY6DQ14210 128 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 LPCAT3Q6P1A2 487 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 KDF1Q8NAX2 398 aaPredicted RBP12.57□□□□□ -0.4
CCDC47-201ENST00000225726 FAM122AQ96E09 287 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 WFIKKN1Q96NZ8 548 aa12.57□□□□□ -0.4
CCDC47-201ENST00000225726 hCG_1807616A0A1W2PRN6 198 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 G3V3Q6 166 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 WNT9BO14905 357 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 KNG1P01042 644 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 FCGR2CP31995 323 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 FBXL19-AS1Q494R0 122 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 ESCO2Q56NI9 601 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 MEGF10Q96KG7 1140 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 TMPRSS13Q9BYE2 586 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 CLEC4MQ9H2X3 399 aaPredicted RBP12.56□□□□□ -0.4
CCDC47-201ENST00000225726 RASL12Q9NYN1 266 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 TLN1Q9Y490 2541 aaKnown RBP12.56□□□□□ -0.4
CCDC47-201ENST00000225726 PI3P19957 117 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 SMIM21Q3B7S5 101 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 ZNF600Q6ZNG1 722 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 OR11H4Q8NGC9 324 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 PRR7Q8TB68 274 aa12.56□□□□□ -0.4
CCDC47-201ENST00000225726 CASTOR1Q8WTX7 329 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms