RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 HIST1H2BJP06899 126 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HIST1H2BOP23527 126 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HIST1H2BBP33778 126 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 RND2P52198 227 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 MTCP1P56278 107 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HIST1H2BDP58876 126 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HIST1H2BCP62807 126 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 DLK1P80370 383 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 ENDOGQ14249 297 aaKnown RBP13.78□□□□□ -0.2
SF3A2-201ENST00000221494 ICAM4Q14773 271 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HIST2H2BEQ16778 126 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 SP6Q3SY56 376 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 TMEM176BQ3YBM2 270 aaPredicted RBP13.78□□□□□ -0.2
SF3A2-201ENST00000221494 ACSF3Q4G176 576 aaPredicted RBP13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.78□□□□□ -0.2
SF3A2-201ENST00000221494 TMEM211Q6ICI0 200 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 REC114Q7Z4M0 266 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HIST3H2BBQ8N257 126 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HIST1H2BHQ93079 126 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 RCC1LQ96I51 464 aaKnown RBP13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HIST1H2BNQ99877 126 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HIST1H2BMQ99879 126 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 RARRES2Q99969 163 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 WSB1Q9Y6I7 421 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 EP300Q09472 2414 aaPredicted RBP13.77□□□□□ -0.21
SF3A2-201ENST00000221494 E9PLN8 166 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 RAMP1O60894 148 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 UMODP07911 640 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 ANOS1P23352 680 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 NKX2-1P43699 371 aaPredicted RBP13.77□□□□□ -0.21
SF3A2-201ENST00000221494 TRIP6Q15654 476 aaKnown RBP13.77□□□□□ -0.21
SF3A2-201ENST00000221494 DHRS13Q6UX07 377 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 OR2M3Q8NG83 312 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 OR5R1Q8NH85 324 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 NPRL2Q8WTW4 380 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 GTF3AQ92664 365 aaKnown RBP13.77□□□□□ -0.21
SF3A2-201ENST00000221494 PIGTQ969N2 578 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 CYYR1Q96J86 154 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 HDHD3Q9BSH5 251 aaPredicted RBP13.77□□□□□ -0.21
SF3A2-201ENST00000221494 FAAP24Q9BTP7 215 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 TMEM222Q9H0R3 208 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 DKKL1Q9UK85 242 aa13.77□□□□□ -0.21
SF3A2-201ENST00000221494 CCDC187A0A096LP49 1063 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 C9J4A7 227 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 M0R135 149 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 PHF1O43189 567 aaPredicted RBP13.76□□□□□ -0.21
SF3A2-201ENST00000221494 VAMP5O95183 116 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 PAX1P15863 534 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 PTGDSP41222 190 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 CARD17Q5XLA6 110 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 CLEC9AQ6UXN8 241 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 ZNF100Q8IYN0 542 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 C1orf87Q8N0U7 546 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 SLC35G3Q8N808 338 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 ZNF799Q96GE5 643 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 TECTBQ96PL2 329 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 SPRY4Q9C004 299 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 C19orf25Q9UFG5 118 aaPredicted RBP13.76□□□□□ -0.21
SF3A2-201ENST00000221494 A0A087WZY1 265 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 LOC102723996A0A087X1L8 192 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 C3orf85A0A1B0GTC6 90 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 IGSF23A1L1A6 192 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 OR5H15A6NDH6 313 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 OR5H1A6NKK0 313 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 TSTD3H0UI37 97 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 MPPED1O15442 326 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 JMJD7P0C870 316 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 EDN3P14138 238 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 HLA-DRB3P79483 266 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 C9orf152Q5JTZ5 239 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 TMEM252Q8N6L7 170 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 OR5L1Q8NGL2 311 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 CLDND2Q8NHS1 167 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 RNASE11Q8TAA1 199 aaKnown RBP13.76□□□□□ -0.21
SF3A2-201ENST00000221494 IL22RA2Q969J5 263 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 DDA1Q9BW61 102 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 MMP24Q9Y5R2 645 aa13.76□□□□□ -0.21
SF3A2-201ENST00000221494 NCOA6Q14686 2063 aaPredicted RBP13.75□□□□□ -0.21
SF3A2-201ENST00000221494 C2orf72A6NCS6 295 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 C9orf172C9J069 976 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 DFFBO76075 338 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 CXCL1P09341 107 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 NBL1P41271 181 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 VAMP2P63027 116 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 IL24Q13007 206 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 PHLDA2Q53GA4 152 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 AKR1C8PQ5T2L2 129 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 C16orf47Q6ZP98 133 aaPredicted RBP13.75□□□□□ -0.21
SF3A2-201ENST00000221494 TIPARPQ7Z3E1 657 aaKnown RBP13.75□□□□□ -0.21
SF3A2-201ENST00000221494 FADS6Q8N9I5 356 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 OR10D4PQ8NGN7 298 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 OR2Y1Q8NGV0 311 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 NABP1Q96AH0 204 aa13.75□□□□□ -0.21
SF3A2-201ENST00000221494 TRBV24-1A0A075B6N3 115 aa13.74□□□□□ -0.21
SF3A2-201ENST00000221494 FAM90A10PA6NDY2 464 aa13.74□□□□□ -0.21
SF3A2-201ENST00000221494 FAM90A18PA6NE21 464 aa13.74□□□□□ -0.21
SF3A2-201ENST00000221494 FAM90A16PA6NEW6 464 aa13.74□□□□□ -0.21
SF3A2-201ENST00000221494 FAM90A20PA6NIJ5 464 aa13.74□□□□□ -0.21
SF3A2-201ENST00000221494 FAM90A8PA6NJQ4 464 aa13.74□□□□□ -0.21
SF3A2-201ENST00000221494 FAM90A7PA6NKC0 464 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms