RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 HERVK_113P61574 105 aa3.9□□□□□ -1.78
CHD9-201ENST00000219084 RHBDD2Q6NTF9 364 aa3.9□□□□□ -1.78
CHD9-201ENST00000219084 NECAP1Q8NC96 275 aa3.9□□□□□ -1.78
CHD9-201ENST00000219084 OR10G8Q8NGN5 311 aa3.9□□□□□ -1.78
CHD9-201ENST00000219084 ADAMTS17Q8TE56 1095 aa3.9□□□□□ -1.78
CHD9-201ENST00000219084 MOGAT1Q96PD6 335 aa3.9□□□□□ -1.78
CHD9-201ENST00000219084 RBM14Q96PK6 669 aaKnown RBP3.9□□□□□ -1.78
CHD9-201ENST00000219084 CHRNA10Q9GZZ6 450 aa3.9□□□□□ -1.78
CHD9-201ENST00000219084 DCAF16Q9NXF7 216 aa3.9□□□□□ -1.78
CHD9-201ENST00000219084 CHD3Q12873 2000 aaKnown RBP3.9□□□□□ -1.78
CHD9-201ENST00000219084 APC2O95996 2303 aa3.9□□□□□ -1.78
CHD9-201ENST00000219084 POM121BA6NF01 834 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 SYNGR2O43760 224 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 BCL2P10415 239 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 BTF3P20290 206 aaKnown RBP3.9□□□□□ -1.79
CHD9-201ENST00000219084 BRS3P32247 399 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 OR3A4PP47883 348 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 PMCHL1Q16048 86 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 ETFDHQ16134 617 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 CLEC18BQ6UXF7 455 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 TBC1D26Q86UD7 250 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 OR5AU1Q8NGC0 362 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 OR4B1Q8NGF8 309 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 H1FXQ92522 213 aaKnown RBP3.9□□□□□ -1.79
CHD9-201ENST00000219084 LINC00052Q96N35 136 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 COL25A1Q9BXS0 654 aaPredicted RBP3.9□□□□□ -1.79
CHD9-201ENST00000219084 MED29Q9NX70 200 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 ICE1Q9Y2F5 2266 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 DNAJC13O75165 2243 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 A6NL46 340 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 OPN1LWP04000 364 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 BCL3P20749 454 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 GUCA2AQ02747 115 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 PRDX4Q13162 271 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 RNF151Q2KHN1 245 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 LILRA6Q6PI73 481 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 LINC01555Q8NAE3 123 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 BHLHE23Q8NDY6 225 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 OR8B12Q8NGG6 310 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 OR5A2Q8NGI9 324 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 PCNPQ8WW12 178 aaKnown RBP3.9□□□□□ -1.79
CHD9-201ENST00000219084 AQP3Q92482 292 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 TPPP3Q9BW30 176 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 GNB4Q9HAV0 340 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 FBXO4Q9UKT5 387 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 METTL12A8MUP2 240 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 M0QZ24 198 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 CDC42EP2O14613 210 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 PLA2G10O15496 165 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 PIAS2O75928 621 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 CFDP00746 253 aaPredicted RBP3.9□□□□□ -1.79
CHD9-201ENST00000219084 KIAA2026Q5HYC2 2103 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 TMEM240Q5SV17 173 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 COL5A1-AS1Q5SY13 56 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 ASTLQ6HA08 431 aaPredicted RBP3.9□□□□□ -1.79
CHD9-201ENST00000219084 DIDO1Q9BTC0 2240 aaKnown RBP3.9□□□□□ -1.79
CHD9-201ENST00000219084 M0R1X1 148 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 CRISP2P16562 243 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 GZMHP20718 246 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 HYAL4Q2M3T9 481 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 ANKRD55Q3KP44 614 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 PDZD11Q5EBL8 140 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 C12orf54Q6X4T0 127 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 OR4C3Q8NH37 302 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 UBALD1Q8TB05 177 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 C12orf49Q9H741 205 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 OR1A1Q9P1Q5 309 aa3.9□□□□□ -1.79
CHD9-201ENST00000219084 TRAV17A0A0B4J275 112 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 M0R296 226 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 CORTO00230 105 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 PPYP01298 95 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 LBX1P52954 281 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 CEACAM16Q2WEN9 425 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 TRIM61Q5EBN2 209 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 ANKRD34AQ69YU3 496 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 PTCRAQ6ISU1 281 aaPredicted RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 ZNF547Q8IVP9 402 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 RDH5Q92781 318 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 NPDC1Q9NQX5 325 aaPredicted RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 PIPOXQ9P0Z9 390 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 LOXL2Q9Y4K0 774 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 KCNE3Q9Y6H6 103 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 C5orf67F2Z3F1 127 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 AQP7O14520 342 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 PTP4A3O75365 173 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 HLA-DQA1P01909 254 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 HOXD4P09016 255 aaPredicted RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 CTLA4P16410 223 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 FCARP24071 287 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 PGFP49763 221 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 INSM1Q01101 510 aaPredicted RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 TMEM267Q0VDI3 215 aaPredicted RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 YRDCQ86U90 279 aaKnown RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 SCCPDHQ8NBX0 429 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 OR2D3Q8NGH3 330 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 ZNF596Q8TC21 504 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 FAM103A1Q9BTL3 118 aaKnown RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 ZNF355PQ9NSJ1 428 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 K7ERU9 68 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 MASP2O00187 686 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms