RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 ARHGAP5-AS1Q96IT6 56 aa10.92□□□□□ -0.66
TIMP1-201ENST00000218388 C18orf12Q96KH6 178 aa10.92□□□□□ -0.66
TIMP1-201ENST00000218388 DMRTB1Q96MA1 342 aa10.92□□□□□ -0.66
TIMP1-201ENST00000218388 MMP27Q9H306 513 aa10.92□□□□□ -0.66
TIMP1-201ENST00000218388 POLR3KQ9Y2Y1 108 aaPredicted RBP10.92□□□□□ -0.66
TIMP1-201ENST00000218388 TRAV20A0A0B4J274 112 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 PPIAL4CA0A0B4J2A2 164 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 A0A1W2PQ09 198 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 hADV38S2A0JD32 116 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 TMEM30CPA0ZSE6 113 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 CYSRT1A8MQ03 144 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 FOXI3A8MTJ6 420 aaPredicted RBP10.91□□□□□ -0.66
TIMP1-201ENST00000218388 SERPINE3A8MV23 424 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 KIAA1324LA8MWY0 1029 aaPredicted RBP10.91□□□□□ -0.66
TIMP1-201ENST00000218388 LIPFP07098 398 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 IGHV4-31P0DP07 118 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 HIST1H1DP16402 221 aaKnown RBP10.91□□□□□ -0.66
TIMP1-201ENST00000218388 S100A5P33763 92 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 MEF2CQ06413 473 aaPredicted RBP10.91□□□□□ -0.66
TIMP1-201ENST00000218388 MOGAT2Q3SYC2 334 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 SLC35E4Q6ICL7 350 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 METAP1DQ6UB28 335 aaPredicted RBP10.91□□□□□ -0.66
TIMP1-201ENST00000218388 GLCCI1Q86VQ1 547 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 FAM185AQ8N0U4 392 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 DCTN5Q9BTE1 182 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 PECRQ9BY49 303 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 NXF2Q9GZY0 626 aaKnown RBP10.91□□□□□ -0.66
TIMP1-201ENST00000218388 RIMS4Q9H426 269 aaPredicted RBP10.91□□□□□ -0.66
TIMP1-201ENST00000218388 NCOR1P1Q9H4R4 102 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 LPAR2Q9HBW0 351 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 OR6C3Q9NZP0 311 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 ZNF581Q9P0T4 197 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 RPUSD1Q9UJJ7 312 aaKnown RBP10.91□□□□□ -0.66
TIMP1-201ENST00000218388 MALRD1Q5VYJ5 2156 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 ITPR3Q14573 2671 aa10.91□□□□□ -0.66
TIMP1-201ENST00000218388 YLPM1P49750 1951 aaKnown RBP10.9□□□□□ -0.66
TIMP1-201ENST00000218388 MEIKINA0A087WXM9 373 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 TRGV10A0A0A0MS01 117 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 ODAMA1E959 279 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 UBE2QL1A1L167 161 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 MFNGO00587 321 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 XRCC3O43542 346 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 EIF4EP06730 217 aaKnown RBP10.9□□□□□ -0.66
TIMP1-201ENST00000218388 GSTP1P09211 210 aaKnown RBP10.9□□□□□ -0.66
TIMP1-201ENST00000218388 INHBBP09529 407 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 CD3GP09693 182 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 GATA3P23771 443 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 CDK2P24941 298 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 ZFP36P26651 326 aaKnown RBP10.9□□□□□ -0.66
TIMP1-201ENST00000218388 MNDAP41218 407 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 TMEM50BP56557 158 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 AESQ08117 197 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 TMEM69Q5SWH9 247 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 RSBN1Q5VWQ0 802 aaPredicted RBP10.9□□□□□ -0.66
TIMP1-201ENST00000218388 BRICD5Q6PL45 260 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 TRAPPC6BQ86SZ2 158 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 CIARTQ8N365 385 aaPredicted RBP10.9□□□□□ -0.66
TIMP1-201ENST00000218388 C8orf46Q8TAG6 207 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 MSI2Q96DH6 328 aaKnown RBP10.9□□□□□ -0.66
TIMP1-201ENST00000218388 COQ2Q96H96 371 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 SULT4A1Q9BR01 284 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 FAAP24Q9BTP7 215 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 CHMP1AQ9HD42 196 aaPredicted RBP10.9□□□□□ -0.66
TIMP1-201ENST00000218388 ING3Q9NXR8 418 aa10.9□□□□□ -0.66
TIMP1-201ENST00000218388 TRAV18A0A075B6X5 111 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 IGHV2-70DA0A0C4DH43 119 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 A0A0G2JMP0 313 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 A0A0X1KG70 313 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 hCG_1809904A0A1W2PP81 198 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 A0A1W2PPE2 198 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 A0A1W2PR64 198 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 A0A1W2PRV1 198 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 POM121CA8CG34 1229 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 C22orf46C9J442 243 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 CTDSP2O14595 271 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 FCN3O75636 299 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 CLPXO76031 633 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 TGFAP01135 160 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 PPIAL4GP0DN37 164 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 CD99P14209 185 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 FOSL1P15407 271 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 GNB3P16520 340 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 ELK1P19419 428 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 DVL1P1P54792 670 aaPredicted RBP10.89□□□□□ -0.67
TIMP1-201ENST00000218388 PITPNAQ00169 270 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 ARFRP1Q13795 201 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 PNLIPRP3Q17RR3 467 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 CNPY1Q3B7I2 92 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 CDNFQ49AH0 187 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 PLAC9Q5JTB6 97 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 BAIAP2L2Q6UXY1 529 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 ZNF497Q6ZNH5 498 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 BIVMQ86UB2 503 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 FGFRL1Q8N441 504 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 ZNF565Q8N9K5 539 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 OR4M2Q8NGB6 313 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 OR4M1Q8NGD0 313 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 PLPPR1Q8TBJ4 325 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 C15orf40Q8WUR7 153 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 TMEM186Q96B77 213 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms