RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ANGPTL4Q9BY76 406 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 DOCK3Q8IZD9 2030 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 ZGLP1P0C6A0 271 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 YBX1P67809 324 aaKnown RBP13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 CEACAM16Q2WEN9 425 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 CCSMST1Q4G0I0 132 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 DOK1Q99704 481 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 CDC20Q12834 499 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 LGALSLQ3ZCW2 172 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 MRGPRDQ8TDS7 321 aa13.03□□□□□ -0.32
SPTLC2-201ENST00000216484 HINT1P49773 126 aaPredicted RBP13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 PPP1R1AQ13522 171 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 MEIG1Q5JSS6 88 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 AFMIDQ63HM1 303 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 LILRA3Q8N6C8 439 aaPredicted RBP13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 HCFC2Q9Y5Z7 792 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 OR13G1Q8NGZ3 307 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 TMEM38BQ9NVV0 291 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 TBC1D29Q9UFV1 150 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 TMEM202A6NGA9 273 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 H0YIG0 161 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 ARF6P62330 175 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 RTL10Q7L3V2 364 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 C16orf82Q7Z2V1 217 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 PELI3Q8N2H9 469 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 MORN4Q8NDC4 146 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 OR4S2Q8NH73 311 aa13.02□□□□□ -0.32
SPTLC2-201ENST00000216484 NPIPB6E9PJ23 425 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 TMEM127O75204 238 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 C16orf52Q8NHV5 167 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 SMIM4Q8WVI0 70 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 A0A1B0GV72 72 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 hADV38S2A0JD32 116 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 CDX4O14627 284 aaPredicted RBP13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 SMIM6P0DI80 62 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 CKS2P33552 79 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 PDXPQ96GD0 296 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 AURKAIP1Q9NWT8 199 aaPredicted RBP13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 DSCR4P56555 118 aaPredicted RBP13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 RPS4XP62701 263 aaKnown RBP13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 FAM74A3Q4VXF1 159 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 LDLRAD3Q86YD5 345 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 INHBBP09529 407 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 DAOP14920 347 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 ISL1P61371 349 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 TMEM95Q3KNT9 176 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 C1orf220Q5T0J3 134 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 HS3ST2Q9Y278 367 aa13.02□□□□□ -0.33
SPTLC2-201ENST00000216484 DAPP1Q9UN19 280 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 IL13RA2Q14627 380 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 C15orf39Q6ZRI6 1047 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 OR4X1Q8NH49 305 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 VAX2Q9UIW0 290 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 TRGV5A0A0B4J1U4 118 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 HOXC4P09017 264 aaPredicted RBP13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 MS4A6EQ96DS6 147 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 FBXL17Q9UF56 701 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 OR4C45A6NMZ5 311 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 CXorf1O96002 111 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 ST6GAL1P15907 406 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 TM4SF20Q53R12 229 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 CDX2Q99626 313 aaPredicted RBP13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 GFRA1P56159 465 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 Q6ZSR9 355 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 TMEM204Q9BSN7 226 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 MPC2O95563 127 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 KLF3P57682 345 aaPredicted RBP13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 HS3ST3A1Q9Y663 406 aa13.01□□□□□ -0.33
SPTLC2-201ENST00000216484 SMIM18P0DKX4 95 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 CLDN10P78369 228 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 C12orf54Q6X4T0 127 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 MUC20Q8N307 709 aaPredicted RBP13□□□□□ -0.33
SPTLC2-201ENST00000216484 C16orf92Q96LL3 132 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 PRDM14Q9GZV8 571 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 KNDC1Q76NI1 1749 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 ABCA4P78363 2273 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 MAS1LP35410 378 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 AGERQ15109 404 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 ECSCRQ19T08 205 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 FAM219AQ8IW50 185 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 TMEM183AQ8IXX5 376 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 TM4SF19Q96DZ7 209 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 WNT5BQ9H1J7 359 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 RER1O15258 196 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 ZNF506Q5JVG8 444 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 TMEM108Q6UXF1 575 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 KCNMB2Q9Y691 235 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 DOCK2Q92608 1830 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 A0A0B4J293 547 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 TMEM255AQ5JRV8 349 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 GEMIN7Q9H840 131 aaKnown RBP13□□□□□ -0.33
SPTLC2-201ENST00000216484 MBNL1Q9NR56 388 aaKnown RBP13□□□□□ -0.33
SPTLC2-201ENST00000216484 GPX2P18283 190 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 PARM1Q6UWI2 310 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 OR11G2Q8NGC1 345 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 TMEM101Q96IK0 257 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 PHLDA3Q9Y5J5 127 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 TARM1B6A8C7 271 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 FCGR3AP08637 254 aa13□□□□□ -0.33
SPTLC2-201ENST00000216484 DNAJB12Q9NXW2 375 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms