RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 C1orf123Q9NWV4 160 aa13.17□□□□□ -0.3
LAPTM4A-201ENST00000175091 NBASA2RRP1 2371 aa13.17□□□□□ -0.3
LAPTM4A-201ENST00000175091 hCG_1807616A0A1W2PRN6 198 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 FAM90A27PA6NNH2 459 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 PI3P19957 117 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 VAMP1P23763 118 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 LMO1P25800 156 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 GLP1RP43220 463 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 RAP2BP61225 183 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 HERPUD1Q15011 391 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 SMIM21Q3B7S5 101 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 UXS1Q8NBZ7 420 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 PLPPR1Q8TBJ4 325 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 ZFAND1Q8TCF1 268 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 NGBQ9NPG2 151 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 COQ3Q9NZJ6 369 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 OPN4Q9UHM6 478 aa13.16□□□□□ -0.3
LAPTM4A-201ENST00000175091 FAM172BPA6NC97 362 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 SRRM5B3KS81 715 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 SLC22A5O76082 557 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 ZNF205O95201 554 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 KNG1P01042 644 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 CTSDP07339 412 aaPredicted RBP13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 RPS2P15880 293 aaKnown RBP13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 CFHR2P36980 270 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 GATA4P43694 442 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 CEBPDP49716 269 aaPredicted RBP13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 ZNF81P51508 661 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 SUPT4H1P63272 117 aaKnown RBP13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 ADIPOQQ15848 244 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 SPRNQ5BIV9 151 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 IGSF11Q5DX21 431 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 LY6G6FQ5SQ64 297 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 ZNF497Q6ZNH5 498 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 ZBTB8BQ8NAP8 495 aaPredicted RBP13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 OR11H4Q8NGC9 324 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 OR5M8Q8NGP6 311 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 PRR7Q8TB68 274 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 LRRC29Q8WV35 223 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 ASB13Q8WXK3 278 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 RNASE6Q93091 150 aaKnown RBP13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 MOB3AQ96BX8 217 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 PHB2Q99623 299 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 TMPRSS13Q9BYE2 586 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 CHIAQ9BZP6 476 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 OR14J1Q9UGF5 321 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 SLC23A1Q9UHI7 598 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 C14orf166Q9Y224 244 aaKnown RBP13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 COL6A6A6NMZ7 2263 aa13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 ANKHD1Q8IWZ3 2542 aaKnown RBP13.15□□□□□ -0.3
LAPTM4A-201ENST00000175091 TPRP12270 2363 aaKnown RBP13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 TRDCB7Z8K6 153 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 SPRY3O43610 288 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 IGHV1-46P01743 117 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 PGAM2P15259 253 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 EGR1P18146 543 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 DNASE1P24855 282 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 FCGR2CP31995 323 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 HLA-DRB3P79483 266 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 DCAF12L2Q5VW00 463 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 ADAM5Q6NVV9 412 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 LPCAT3Q6P1A2 487 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 C11orf88Q6PI97 169 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 MOB1BQ7L9L4 216 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 PLSCR3Q9NRY6 295 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 GLS2Q9UI32 602 aa13.15□□□□□ -0.31
LAPTM4A-201ENST00000175091 NKX2-6A6NCS4 301 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 DBX1A6NMT0 343 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 H7C1Q1 480 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 PSPNO60542 156 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 SIX6O95475 246 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 SFT2D2O95562 160 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 SCTP09683 121 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 HLA-GP17693 338 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 ATXN7L3Q14CW9 347 aaPredicted RBP13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 NCMAPQ5T1S8 102 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 LAMTOR1Q6IAA8 161 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 CLEC18BQ6UXF7 455 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 DMRTC2Q8IXT2 367 aaPredicted RBP13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 C9orf62Q8N4C0 152 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 GCSAMQ8N6F7 178 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 LILRB4Q8NHJ6 448 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 CASTOR1Q8WTX7 329 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 ITLN1Q8WWA0 313 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 WDR89Q96FK6 387 aaPredicted RBP13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 ESRP2Q9H6T0 727 aaKnown RBP13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 RASL12Q9NYN1 266 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 IL19Q9UHD0 177 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 ZDHHC8Q9ULC8 765 aa13.14□□□□□ -0.31
LAPTM4A-201ENST00000175091 CACNA1DQ01668 2161 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 ACACBO00763 2458 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 IGKV1-6A0A0C4DH72 117 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 IFNL4K9M1U5 179 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 PPYP01298 95 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 ZNF728P0DKX0 622 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 RCC1P18754 421 aaPredicted RBP13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 UCP3P55916 312 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 SORDQ00796 357 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 Q5BKY6 102 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms