RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 C19orf25Q9UFG5 118 aaPredicted RBP12.08□□□□□ -0.48
USH1C-201ENST00000005226 CACNA1EQ15878 2313 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 RPS18P62269 152 aaKnown RBP12.07□□□□□ -0.48
USH1C-201ENST00000005226 CEACAM16Q2WEN9 425 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 PLEKHF2Q9H8W4 249 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 CALHM2Q9HA72 323 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 PTRH2Q9Y3E5 179 aaKnown RBP12.07□□□□□ -0.48
USH1C-201ENST00000005226 CYB5BO43169 146 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 CXCL13O43927 109 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 SCAF4O95104 1147 aaKnown RBP12.07□□□□□ -0.48
USH1C-201ENST00000005226 VAMP5O95183 116 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 EDN3P14138 238 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 BCL3P20749 454 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 MDKP21741 143 aaPredicted RBP12.07□□□□□ -0.48
USH1C-201ENST00000005226 DSCR4P56555 118 aaPredicted RBP12.07□□□□□ -0.48
USH1C-201ENST00000005226 C4orf17Q53FE4 359 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 MRPL14Q6P1L8 145 aaKnown RBP12.07□□□□□ -0.48
USH1C-201ENST00000005226 ZNF100Q8IYN0 542 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 ZNF383Q8NA42 475 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 LFNGQ8NES3 379 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 WSB1Q9Y6I7 421 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 PI4KAP42356 2102 aa12.07□□□□□ -0.48
USH1C-201ENST00000005226 FREM1Q5H8C1 2179 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 hCG_38984A0A1B0GV85 526 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 HLA-HP01893 362 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 TRGC2P03986 189 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 UCP3P55916 312 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 TLE1Q04724 770 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 ZNF266Q14584 549 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 TMEM42Q69YG0 159 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 FAM180AQ6UWF9 173 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 AAED1Q7RTV5 226 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 OR10D4PQ8NGN7 298 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 LYRM2Q9NU23 88 aaPredicted RBP12.06□□□□□ -0.48
USH1C-201ENST00000005226 FAM186AA6NE01 2351 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 LY6G6EA0A0G2JKS1 128 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 PITX3O75364 302 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 UMODP07911 640 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 RFPL3SP0C7P2 107 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 FUT6P51993 359 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 HERPUD1Q15011 391 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 IGFBP7Q16270 282 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 GPR137CQ8N3F9 429 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 PLPPR1Q8TBJ4 325 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 CPNE4Q96A23 557 aaPredicted RBP12.06□□□□□ -0.48
USH1C-201ENST00000005226 SIGLEC12Q96PQ1 595 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 PFDN5Q99471 154 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 GPR61Q9BZJ8 451 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 U3KQA8 63 aa12.06□□□□□ -0.48
USH1C-201ENST00000005226 A0A0G2JRQ6 117 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 OR6C6A6NF89 314 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 CDS2O95674 445 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 CARD18P57730 90 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 RPL23AP62750 156 aaKnown RBP12.05□□□□□ -0.48
USH1C-201ENST00000005226 TMEM267Q0VDI3 215 aaPredicted RBP12.05□□□□□ -0.48
USH1C-201ENST00000005226 HNF4GQ14541 408 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 TMEM211Q6ICI0 200 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 THNSL2Q86YJ6 484 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 NEK7Q8TDX7 302 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 OR2H1Q9GZK4 316 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 FGF23Q9GZV9 251 aaPredicted RBP12.05□□□□□ -0.48
USH1C-201ENST00000005226 A0A087WZY1 265 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 A0A1B0GW64 132 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 SLC22A20A6NK97 555 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 HIST1H2BKO60814 126 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 HIST1H2BJP06899 126 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 CST2P09228 141 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 HIST1H2BOP23527 126 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 FKBP2P26885 142 aaKnown RBP12.05□□□□□ -0.48
USH1C-201ENST00000005226 HIST1H2BBP33778 126 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 MAS1LP35410 378 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 CDX1P47902 265 aaPredicted RBP12.05□□□□□ -0.48
USH1C-201ENST00000005226 HIST1H2BDP58876 126 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 HIST1H2BCP62807 126 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 RAC1P63000 192 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 HIST2H2BEQ16778 126 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.05□□□□□ -0.48
USH1C-201ENST00000005226 AKR1C8PQ5T2L2 129 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 C1QL4Q86Z23 238 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 CMTM1Q8IZ96 169 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 IL22RA1Q8N6P7 574 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 ZNF610Q8N9Z0 462 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 CPEB3Q8NE35 698 aaKnown RBP12.05□□□□□ -0.48
USH1C-201ENST00000005226 HIST1H2BHQ93079 126 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 RHOVQ96L33 236 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 FOXB1Q99853 325 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 HIST1H2BNQ99877 126 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 HIST1H2BMQ99879 126 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 VSIRQ9H7M9 311 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 GNG13Q9P2W3 67 aa12.05□□□□□ -0.48
USH1C-201ENST00000005226 IGHV1-45A0A0A0MS14 117 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 IGKV1-6A0A0C4DH72 117 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 WRBO00258 174 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 HSPA12AO43301 675 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 SOD3P08294 240 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 FGF8P55075 233 aaPredicted RBP12.04□□□□□ -0.48
USH1C-201ENST00000005226 PAX9P55771 341 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 MPV17LQ2QL34 196 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 ZNF845Q96IR2 970 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms