RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	USPL1	Q5W0Q7	1092 aa		12.79	□□□□□ -0.36
STRADA-231	ENST00000638708	SRGAP1	Q7Z6B7	1085 aa		12.79	□□□□□ -0.36
STRADA-231	ENST00000638708	TADA2B	Q86TJ2	420 aa		12.79	□□□□□ -0.36
STRADA-231	ENST00000638708	NSUN7	Q8NE18	718 aa	Known RBP	12.79	□□□□□ -0.36
STRADA-231	ENST00000638708	PCDHA7	Q9UN72	937 aa		12.79	□□□□□ -0.36
STRADA-231	ENST00000638708	SBNO1	A3KN83	1393 aa		12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	NCAPD2	Q15021	1401 aa		12.78	□□□□□ -0.36
STRADA-231	ENST00000638708		A0A087WUV0	522 aa	Predicted RBP	12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	SLC3A2	P08195	630 aa	Known RBP	12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	TOP1	P11387	765 aa	Known RBP	12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	LMOD1	P29536	600 aa	Predicted RBP	12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	EIF5	P55010	431 aa	Known RBP	12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	UBASH3A	P57075	661 aa		12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	SCRN1	Q12765	414 aa		12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	NBPF6	Q5VWK0	638 aa		12.78	□□□□□ -0.36
STRADA-231	ENST00000638708		Q6ZUG5	572 aa		12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	NECTIN2	Q92692	538 aa		12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	NBPF4	Q96M43	638 aa		12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	HSD3B7	Q9H2F3	369 aa		12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	ANKZF1	Q9H8Y5	726 aa		12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	RTEL1	Q9NZ71	1219 aa		12.78	□□□□□ -0.36
STRADA-231	ENST00000638708	ALDH1L1	O75891	902 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	CCDC172	P0C7W6	258 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	NDUFA8	P51970	172 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	MCM6	Q14566	821 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	SART3	Q15020	963 aa	Known RBP	12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	WAPL	Q7Z5K2	1190 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	FAM177A1	Q8N128	213 aa	Predicted RBP	12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	CEP112	Q8N8E3	955 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	NEK1	Q96PY6	1258 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	GBP3	Q9H0R5	595 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	ACBD3	Q9H3P7	528 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	MED4	Q9NPJ6	270 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	BABAM1	Q9NWV8	329 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	L1RE1	Q9UN81	338 aa		12.77	□□□□□ -0.36
STRADA-231	ENST00000638708	CUTA	O60888	179 aa		12.77	□□□□□ -0.37
STRADA-231	ENST00000638708	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.77	□□□□□ -0.37
STRADA-231	ENST00000638708	ILDR1	Q86SU0	546 aa	Predicted RBP	12.77	□□□□□ -0.37
STRADA-231	ENST00000638708	GPATCH11	Q8N954	259 aa		12.77	□□□□□ -0.37
STRADA-231	ENST00000638708	CNNM3	Q8NE01	707 aa		12.77	□□□□□ -0.37
STRADA-231	ENST00000638708	CEP83	Q9Y592	693 aa		12.77	□□□□□ -0.37
STRADA-231	ENST00000638708	TOPAZ1	Q8N9V7	1692 aa		12.77	□□□□□ -0.37
STRADA-231	ENST00000638708	TNR	Q92752	1358 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708		A0A1B0GVL5	298 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	PTPDC1	A2A3K4	754 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	STX10	O60499	249 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	ATP1A3	P13637	1013 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	HDGF	P51858	240 aa	Known RBP	12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	TUBB2A	Q13885	445 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	HSP90B2P	Q58FF3	399 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	AACS	Q86V21	672 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	DPF2	Q92785	391 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	FMNL2	Q96PY5	1086 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	BAG1	Q99933	345 aa	Predicted RBP	12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	TUBB2B	Q9BVA1	445 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	SALL1	Q9NSC2	1324 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	N4BP1	O75113	896 aa	Known RBP	12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	SERPINC1	P01008	464 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	MYL5	Q02045	173 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	TBX2	Q13207	712 aa	Predicted RBP	12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	CFAP100	Q494V2	611 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	KCNG4	Q8TDN1	519 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	NUDT16	Q96DE0	195 aa	Known RBP	12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	FSD1	Q9BTV5	496 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	CXorf56	Q9H5V9	222 aa		12.76	□□□□□ -0.37
STRADA-231	ENST00000638708	USP31	Q70CQ4	1352 aa		12.75	□□□□□ -0.37
STRADA-231	ENST00000638708	BIN1	O00499	593 aa		12.75	□□□□□ -0.37
STRADA-231	ENST00000638708	TAF5L	O75529	589 aa		12.75	□□□□□ -0.37
STRADA-231	ENST00000638708	YEATS4	O95619	227 aa		12.75	□□□□□ -0.37
STRADA-231	ENST00000638708	APP	P05067	770 aa		12.75	□□□□□ -0.37
STRADA-231	ENST00000638708	FOSB	P53539	338 aa		12.75	□□□□□ -0.37
STRADA-231	ENST00000638708	DNAJC21	Q5F1R6	531 aa	Known RBP	12.75	□□□□□ -0.37
STRADA-231	ENST00000638708	BEND3	Q5T5X7	828 aa		12.75	□□□□□ -0.37
STRADA-231	ENST00000638708	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.75	□□□□□ -0.37
STRADA-231	ENST00000638708	DONSON	Q9NYP3	566 aa		12.75	□□□□□ -0.37
STRADA-231	ENST00000638708	RFX7	Q2KHR2	1363 aa		12.75	□□□□□ -0.37
STRADA-231	ENST00000638708	KIF1C	O43896	1103 aa	Known RBP	12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	CTDNEP1	O95476	244 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	TUBB	P07437	444 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	HSP90AB2P	Q58FF8	381 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	HDGFL1	Q5TGJ6	251 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	LINC00301	Q8NCQ3	95 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	PNKP	Q96T60	521 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	BICC1	Q9H694	974 aa	Known RBP	12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	PHAX	Q9H814	394 aa	Known RBP	12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	ABCB6	Q9NP58	842 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	CCDC61	Q9Y6R9	512 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	MRC1	P22897	1456 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	GOLGA8F	Q08AF8	430 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	GOLGA8DP	Q0D2H9	430 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	CASP8	Q14790	479 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	TOGARAM2	Q6ZUX3	1019 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	CDC23	Q9UJX2	597 aa		12.74	□□□□□ -0.37
STRADA-231	ENST00000638708	TMEM232	C9JQI7	657 aa		12.73	□□□□□ -0.37
STRADA-231	ENST00000638708	STK38	Q15208	465 aa		12.73	□□□□□ -0.37
STRADA-231	ENST00000638708	E2F4	Q16254	413 aa		12.73	□□□□□ -0.37
STRADA-231	ENST00000638708	DNAAF4	Q8WXU2	420 aa		12.73	□□□□□ -0.37

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