RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ZBTB22O15209 634 aa17.65■□□□□ 0.42
CBWD3-217ENST00000621474 RPS12P25398 132 aaKnown RBP17.65■□□□□ 0.42
CBWD3-217ENST00000621474 AGBL3Q8NEM8 1001 aa17.65■□□□□ 0.42
CBWD3-217ENST00000621474 NEUROD6Q96NK8 337 aa17.65■□□□□ 0.42
CBWD3-217ENST00000621474 IL1RAPL2Q9NP60 686 aa17.65■□□□□ 0.42
CBWD3-217ENST00000621474 DBNLQ9UJU6 430 aaKnown RBP17.65■□□□□ 0.42
CBWD3-217ENST00000621474 APBB1O00213 710 aa17.65■□□□□ 0.42
CBWD3-217ENST00000621474 EGFRP00533 1210 aa17.65■□□□□ 0.42
CBWD3-217ENST00000621474 EPHX2P34913 555 aa17.65■□□□□ 0.42
CBWD3-217ENST00000621474 MICALL2Q8IY33 904 aa17.65■□□□□ 0.42
CBWD3-217ENST00000621474 FBXW7Q969H0 707 aa17.65■□□□□ 0.42
CBWD3-217ENST00000621474 KIF1BPQ96EK5 621 aa17.65■□□□□ 0.42
CBWD3-217ENST00000621474 DBNDD2Q9BQY9 259 aa17.65■□□□□ 0.42
CBWD3-217ENST00000621474 CNOT7Q9UIV1 285 aaKnown RBP17.65■□□□□ 0.42
CBWD3-217ENST00000621474 RAB11FIP3O75154 756 aa17.64■□□□□ 0.41
CBWD3-217ENST00000621474 HDAC1Q13547 482 aaPredicted RBP17.64■□□□□ 0.41
CBWD3-217ENST00000621474 LMOD1P29536 600 aaPredicted RBP17.63■□□□□ 0.41
CBWD3-217ENST00000621474 MYO3BQ8WXR4 1341 aa17.63■□□□□ 0.41
CBWD3-217ENST00000621474 HIRAP54198 1017 aaPredicted RBP17.62■□□□□ 0.41
CBWD3-217ENST00000621474 FKBP1AP62942 108 aaKnown RBP17.62■□□□□ 0.41
CBWD3-217ENST00000621474 RASGRF1Q13972 1273 aa17.62■□□□□ 0.41
CBWD3-217ENST00000621474 GRIK5Q16478 980 aa17.62■□□□□ 0.41
CBWD3-217ENST00000621474 MFSD14BQ5SR56 506 aa17.62■□□□□ 0.41
CBWD3-217ENST00000621474 TRPM4Q8TD43 1214 aa17.62■□□□□ 0.41
CBWD3-217ENST00000621474 CCDC8Q9H0W5 538 aaPredicted RBP17.62■□□□□ 0.41
CBWD3-217ENST00000621474 ARID4AP29374 1257 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-217ENST00000621474 ZNF280AP59817 542 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-217ENST00000621474 SCARF1Q14162 830 aa17.61■□□□□ 0.41
CBWD3-217ENST00000621474 SAMD7Q7Z3H4 446 aa17.61■□□□□ 0.41
CBWD3-217ENST00000621474 KIAA0825Q8IV33 1275 aa17.61■□□□□ 0.41
CBWD3-217ENST00000621474 ADARB2Q9NS39 739 aaKnown RBP17.61■□□□□ 0.41
CBWD3-217ENST00000621474 MYO5AQ9Y4I1 1855 aaKnown RBP17.61■□□□□ 0.41
CBWD3-217ENST00000621474 POLR2AP24928 1970 aaKnown RBP17.61■□□□□ 0.41
CBWD3-217ENST00000621474 SMARCA5O60264 1052 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-217ENST00000621474 IGHDP01880 384 aa17.61■□□□□ 0.41
CBWD3-217ENST00000621474 USP17L8P0C7I0 530 aa17.61■□□□□ 0.41
CBWD3-217ENST00000621474 CHAF1AQ13111 956 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-217ENST00000621474 PI16Q6UXB8 463 aa17.61■□□□□ 0.41
CBWD3-217ENST00000621474 AACSQ86V21 672 aa17.61■□□□□ 0.41
CBWD3-217ENST00000621474 LRRCC1Q9C099 1032 aa17.61■□□□□ 0.41
CBWD3-217ENST00000621474 SEMA3EO15041 775 aa17.6■□□□□ 0.41
CBWD3-217ENST00000621474 FRAT2O75474 233 aaPredicted RBP17.6■□□□□ 0.41
CBWD3-217ENST00000621474 TOMM70O94826 608 aa17.6■□□□□ 0.41
CBWD3-217ENST00000621474 MCAMP43121 646 aa17.6■□□□□ 0.41
CBWD3-217ENST00000621474 PDS5AQ29RF7 1337 aaKnown RBP17.59■□□□□ 0.41
CBWD3-217ENST00000621474 H7C1D1 291 aa17.59■□□□□ 0.41
CBWD3-217ENST00000621474 USP50Q70EL3 339 aaPredicted RBP17.59■□□□□ 0.41
CBWD3-217ENST00000621474 PNMA8AQ86V59 439 aaPredicted RBP17.59■□□□□ 0.41
CBWD3-217ENST00000621474 CLASRPQ8N2M8 674 aaKnown RBP17.59■□□□□ 0.41
CBWD3-217ENST00000621474 GNL3LQ9NVN8 582 aaKnown RBP17.59■□□□□ 0.41
CBWD3-217ENST00000621474 HMG20BQ9P0W2 317 aa17.59■□□□□ 0.41
CBWD3-217ENST00000621474 DENND2AQ9ULE3 1009 aa17.59■□□□□ 0.41
CBWD3-217ENST00000621474 ECM29Q5VYK3 1845 aa17.59■□□□□ 0.41
CBWD3-217ENST00000621474 TBC1D10BQ4KMP7 808 aaPredicted RBP17.58■□□□□ 0.41
CBWD3-217ENST00000621474 EAPPQ56P03 285 aaPredicted RBP17.58■□□□□ 0.41
CBWD3-217ENST00000621474 ZNF512BQ96KM6 892 aaPredicted RBP17.58■□□□□ 0.41
CBWD3-217ENST00000621474 MYOZ2Q9NPC6 264 aa17.58■□□□□ 0.41
CBWD3-217ENST00000621474 SALL1Q9NSC2 1324 aa17.58■□□□□ 0.4
CBWD3-217ENST00000621474 F8W031 263 aaPredicted RBP17.58■□□□□ 0.4
CBWD3-217ENST00000621474 GORABQ5T7V8 394 aa17.58■□□□□ 0.4
CBWD3-217ENST00000621474 TBC1D22AQ8WUA7 517 aa17.58■□□□□ 0.4
CBWD3-217ENST00000621474 PCDHAC2Q9Y5I4 1007 aa17.58■□□□□ 0.4
CBWD3-217ENST00000621474 CENPBP07199 599 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-217ENST00000621474 PRDX5P30044 214 aa17.57■□□□□ 0.4
CBWD3-217ENST00000621474 KIF4BQ2VIQ3 1234 aa17.57■□□□□ 0.4
CBWD3-217ENST00000621474 LDHDQ86WU2 507 aa17.57■□□□□ 0.4
CBWD3-217ENST00000621474 RBM46Q8TBY0 533 aaKnown RBP17.57■□□□□ 0.4
CBWD3-217ENST00000621474 WDR66Q8TBY9 1149 aa17.57■□□□□ 0.4
CBWD3-217ENST00000621474 DOCK2Q92608 1830 aa17.56■□□□□ 0.4
CBWD3-217ENST00000621474 ASTN2O75129 1339 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-217ENST00000621474 CCDC158Q5M9N0 1113 aa17.56■□□□□ 0.4
CBWD3-217ENST00000621474 RBM26Q5T8P6 1007 aaKnown RBP17.56■□□□□ 0.4
CBWD3-217ENST00000621474 SMC5Q8IY18 1101 aa17.56■□□□□ 0.4
CBWD3-217ENST00000621474 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-217ENST00000621474 SPATA5Q8NB90 893 aa17.56■□□□□ 0.4
CBWD3-217ENST00000621474 ZBED3Q96IU2 234 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-217ENST00000621474 PGAP2Q9UHJ9 254 aa17.56■□□□□ 0.4
CBWD3-217ENST00000621474 MYH2Q9UKX2 1941 aa17.55■□□□□ 0.4
CBWD3-217ENST00000621474 UQCRFS1P1P0C7P4 283 aa17.55■□□□□ 0.4
CBWD3-217ENST00000621474 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
CBWD3-217ENST00000621474 OGFOD1Q8N543 542 aa17.55■□□□□ 0.4
CBWD3-217ENST00000621474 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
CBWD3-217ENST00000621474 BCL11AQ9H165 835 aa17.55■□□□□ 0.4
CBWD3-217ENST00000621474 TTF2Q9UNY4 1162 aaKnown RBP17.55■□□□□ 0.4
CBWD3-217ENST00000621474 AOX1Q06278 1338 aa17.55■□□□□ 0.4
CBWD3-217ENST00000621474 WNT10BO00744 389 aa17.54■□□□□ 0.4
CBWD3-217ENST00000621474 IFIT2P09913 472 aaKnown RBP17.54■□□□□ 0.4
CBWD3-217ENST00000621474 NBPF9Q3BBW0 867 aa17.54■□□□□ 0.4
CBWD3-217ENST00000621474 RWDD1Q9H446 243 aaPredicted RBP17.54■□□□□ 0.4
CBWD3-217ENST00000621474 SUGT1Q9Y2Z0 365 aa17.54■□□□□ 0.4
CBWD3-217ENST00000621474 MMP14P50281 582 aa17.54■□□□□ 0.4
CBWD3-217ENST00000621474 MAP1SQ66K74 1059 aaPredicted RBP17.54■□□□□ 0.4
CBWD3-217ENST00000621474 CHADLQ6NUI6 762 aa17.54■□□□□ 0.4
CBWD3-217ENST00000621474 MTMR14Q8NCE2 650 aa17.54■□□□□ 0.4
CBWD3-217ENST00000621474 ZNF384Q8TF68 577 aa17.54■□□□□ 0.4
CBWD3-217ENST00000621474 SNRKQ9NRH2 765 aa17.54■□□□□ 0.4
CBWD3-217ENST00000621474 NDUFB9Q9Y6M9 179 aa17.54■□□□□ 0.4
CBWD3-217ENST00000621474 CYP2E1P05181 493 aaPredicted RBP17.53■□□□□ 0.4
CBWD3-217ENST00000621474 ZAP70P43403 619 aa17.53■□□□□ 0.4
CBWD3-217ENST00000621474 TBC1D9Q6ZT07 1266 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms