RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 RAD50Q92878 1312 aa19.15■□□□□ 0.66
CBWD3-216ENST00000621396 ZNF532Q9HCE3 1301 aa19.15■□□□□ 0.66
CBWD3-216ENST00000621396 C21orf2O43822 256 aa19.15■□□□□ 0.66
CBWD3-216ENST00000621396 DPP8Q6V1X1 898 aaPredicted RBP19.15■□□□□ 0.66
CBWD3-216ENST00000621396 MED23Q9ULK4 1368 aa19.15■□□□□ 0.66
CBWD3-216ENST00000621396 CCDC171Q6TFL3 1326 aa19.15■□□□□ 0.66
CBWD3-216ENST00000621396 TTF1Q15361 905 aaPredicted RBP19.15■□□□□ 0.66
CBWD3-216ENST00000621396 SLX4Q8IY92 1834 aa19.14■□□□□ 0.66
CBWD3-216ENST00000621396 CD2BP2O95400 341 aaKnown RBP19.14■□□□□ 0.66
CBWD3-216ENST00000621396 PDE6AP16499 860 aa19.14■□□□□ 0.66
CBWD3-216ENST00000621396 KCNA3P22001 575 aa19.14■□□□□ 0.66
CBWD3-216ENST00000621396 ATP2B4P23634 1241 aa19.14■□□□□ 0.66
CBWD3-216ENST00000621396 RASEFQ8IZ41 740 aa19.14■□□□□ 0.66
CBWD3-216ENST00000621396 PODXL2Q9NZ53 605 aa19.14■□□□□ 0.66
CBWD3-216ENST00000621396 POLD1P28340 1107 aa19.14■□□□□ 0.65
CBWD3-216ENST00000621396 ADD2P35612 726 aa19.14■□□□□ 0.65
CBWD3-216ENST00000621396 STYK1Q6J9G0 422 aa19.14■□□□□ 0.65
CBWD3-216ENST00000621396 TAF6LQ9Y6J9 622 aa19.14■□□□□ 0.65
CBWD3-216ENST00000621396 PRDX5P30044 214 aa19.13■□□□□ 0.65
CBWD3-216ENST00000621396 DOK7Q18PE1 504 aa19.13■□□□□ 0.65
CBWD3-216ENST00000621396 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.13■□□□□ 0.65
CBWD3-216ENST00000621396 RAI14Q9P0K7 980 aa19.13■□□□□ 0.65
CBWD3-216ENST00000621396 C10orf71Q711Q0 1435 aa19.13■□□□□ 0.65
CBWD3-216ENST00000621396 DENND2AQ9ULE3 1009 aa19.13■□□□□ 0.65
CBWD3-216ENST00000621396 RBM8AQ9Y5S9 174 aaKnown RBP19.13■□□□□ 0.65
CBWD3-216ENST00000621396 GRIK5Q16478 980 aa19.12■□□□□ 0.65
CBWD3-216ENST00000621396 ADGRA1Q86SQ6 560 aa19.12■□□□□ 0.65
CBWD3-216ENST00000621396 MIGA1Q8NAN2 632 aa19.12■□□□□ 0.65
CBWD3-216ENST00000621396 CNKSR1Q969H4 720 aa19.12■□□□□ 0.65
CBWD3-216ENST00000621396 TMX4Q9H1E5 349 aaPredicted RBP19.12■□□□□ 0.65
CBWD3-216ENST00000621396 CD209Q9NNX6 404 aa19.12■□□□□ 0.65
CBWD3-216ENST00000621396 HSPA4P34932 840 aa19.12■□□□□ 0.65
CBWD3-216ENST00000621396 MAP3K12Q12852 859 aa19.12■□□□□ 0.65
CBWD3-216ENST00000621396 COL9A3Q14050 684 aaPredicted RBP19.12■□□□□ 0.65
CBWD3-216ENST00000621396 MAP4K1Q92918 833 aa19.12■□□□□ 0.65
CBWD3-216ENST00000621396 HELLSQ9NRZ9 838 aa19.12■□□□□ 0.65
CBWD3-216ENST00000621396 TCRBV5S4A2TA0A5A2 114 aa19.11■□□□□ 0.65
CBWD3-216ENST00000621396 TMC4Q7Z404 712 aa19.11■□□□□ 0.65
CBWD3-216ENST00000621396 ZNF804AQ7Z570 1209 aa19.11■□□□□ 0.65
CBWD3-216ENST00000621396 ZNF384Q8TF68 577 aa19.11■□□□□ 0.65
CBWD3-216ENST00000621396 APPBP2Q92624 585 aa19.11■□□□□ 0.65
CBWD3-216ENST00000621396 UPF3BQ9BZI7 483 aaKnown RBP19.11■□□□□ 0.65
CBWD3-216ENST00000621396 SPRYD3Q8NCJ5 442 aa19.11■□□□□ 0.65
CBWD3-216ENST00000621396 C7orf43Q8WVR3 580 aa19.11■□□□□ 0.65
CBWD3-216ENST00000621396 RFX7Q2KHR2 1363 aa19.1■□□□□ 0.65
CBWD3-216ENST00000621396 GPAA1O43292 621 aa19.1■□□□□ 0.65
CBWD3-216ENST00000621396 CPA1P15085 419 aa19.1■□□□□ 0.65
CBWD3-216ENST00000621396 TDRD7Q8NHU6 1098 aaKnown RBP19.1■□□□□ 0.65
CBWD3-216ENST00000621396 TBC1D2Q9BYX2 928 aa19.1■□□□□ 0.65
CBWD3-216ENST00000621396 ZC3H12CQ9C0D7 883 aaKnown RBP19.1■□□□□ 0.65
CBWD3-216ENST00000621396 ZFYP08048 801 aaPredicted RBP19.1■□□□□ 0.65
CBWD3-216ENST00000621396 HSPD1P10809 573 aaKnown RBP19.1■□□□□ 0.65
CBWD3-216ENST00000621396 PTGER2P43116 358 aa19.1■□□□□ 0.65
CBWD3-216ENST00000621396 TTLL6Q8N841 843 aa19.1■□□□□ 0.65
CBWD3-216ENST00000621396 FBXW7Q969H0 707 aa19.1■□□□□ 0.65
CBWD3-216ENST00000621396 SGIP1Q9BQI5 828 aa19.1■□□□□ 0.65
CBWD3-216ENST00000621396 KCNQ5Q9NR82 932 aa19.1■□□□□ 0.65
CBWD3-216ENST00000621396 FOXP2O15409 715 aa19.09■□□□□ 0.65
CBWD3-216ENST00000621396 MCCP23508 829 aa19.09■□□□□ 0.65
CBWD3-216ENST00000621396 NECTIN1Q15223 517 aa19.09■□□□□ 0.65
CBWD3-216ENST00000621396 ADCK5Q3MIX3 580 aa19.09■□□□□ 0.65
CBWD3-216ENST00000621396 TTLL5Q6EMB2 1281 aa19.09■□□□□ 0.65
CBWD3-216ENST00000621396 DBNDD1Q9H9R9 158 aa19.09■□□□□ 0.65
CBWD3-216ENST00000621396 SNX14Q9Y5W7 946 aa19.09■□□□□ 0.65
CBWD3-216ENST00000621396 DUOX1Q9NRD9 1551 aa19.09■□□□□ 0.65
CBWD3-216ENST00000621396 EIF5BO60841 1220 aaKnown RBP19.09■□□□□ 0.65
CBWD3-216ENST00000621396 UBE3CQ15386 1083 aa19.08■□□□□ 0.64
CBWD3-216ENST00000621396 LRRFIP1Q32MZ4 808 aaKnown RBP19.08■□□□□ 0.64
CBWD3-216ENST00000621396 CREB3L3Q68CJ9 461 aa19.08■□□□□ 0.64
CBWD3-216ENST00000621396 ZSCAN25Q6NSZ9 544 aa19.08■□□□□ 0.64
CBWD3-216ENST00000621396 MXD3Q9BW11 206 aa19.08■□□□□ 0.64
CBWD3-216ENST00000621396 ARMT1Q9H993 441 aa19.08■□□□□ 0.64
CBWD3-216ENST00000621396 LRRC37AA6NMS7 1700 aa19.08■□□□□ 0.64
CBWD3-216ENST00000621396 CYP7A1P22680 504 aa19.08■□□□□ 0.64
CBWD3-216ENST00000621396 MECOMQ03112 1051 aa19.08■□□□□ 0.64
CBWD3-216ENST00000621396 GTF2IP78347 998 aa19.07■□□□□ 0.64
CBWD3-216ENST00000621396 DDRGK1Q96HY6 314 aa19.07■□□□□ 0.64
CBWD3-216ENST00000621396 LTBP1Q14766 1721 aa19.07■□□□□ 0.64
CBWD3-216ENST00000621396 SLC27A2O14975 620 aa19.06■□□□□ 0.64
CBWD3-216ENST00000621396 SEMA3EO15041 775 aa19.06■□□□□ 0.64
CBWD3-216ENST00000621396 PRKAB2O43741 272 aa19.06■□□□□ 0.64
CBWD3-216ENST00000621396 MBD4O95243 580 aa19.06■□□□□ 0.64
CBWD3-216ENST00000621396 NEK4P51957 841 aa19.06■□□□□ 0.64
CBWD3-216ENST00000621396 AOC3Q16853 763 aa19.06■□□□□ 0.64
CBWD3-216ENST00000621396 C15orf52Q6ZUT6 534 aaKnown RBP19.06■□□□□ 0.64
CBWD3-216ENST00000621396 NOL8Q76FK4 1167 aaKnown RBP19.06■□□□□ 0.64
CBWD3-216ENST00000621396 AIDAQ96BJ3 306 aa19.06■□□□□ 0.64
CBWD3-216ENST00000621396 APPP05067 770 aa19.06■□□□□ 0.64
CBWD3-216ENST00000621396 ERICH6Q7L0X2 663 aa19.06■□□□□ 0.64
CBWD3-216ENST00000621396 LCORLQ8N3X6 602 aa19.06■□□□□ 0.64
CBWD3-216ENST00000621396 LARP6Q9BRS8 491 aaKnown RBP19.06■□□□□ 0.64
CBWD3-216ENST00000621396 G3V3G9 751 aa19.05■□□□□ 0.64
CBWD3-216ENST00000621396 IL1R1P14778 569 aa19.05■□□□□ 0.64
CBWD3-216ENST00000621396 HAND2P61296 217 aa19.05■□□□□ 0.64
CBWD3-216ENST00000621396 DIXDC1Q155Q3 683 aa19.05■□□□□ 0.64
CBWD3-216ENST00000621396 DCAF8Q5TAQ9 597 aa19.05■□□□□ 0.64
CBWD3-216ENST00000621396 NSUN4Q96CB9 384 aaKnown RBP19.05■□□□□ 0.64
CBWD3-216ENST00000621396 CYP21A2P08686 494 aa19.05■□□□□ 0.64
CBWD3-216ENST00000621396 DYNLL1P63167 89 aaKnown RBP19.05■□□□□ 0.64
CBWD3-216ENST00000621396 NAA16Q6N069 864 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms