RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 ZBTB43O43298 467 aa17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 LMOD1P29536 600 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 CRKLP46109 303 aaKnown RBP17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 MSL1Q68DK7 614 aa17.26■□□□□ 0.35
TNFRSF11A-206ENST00000617039 FAM47AQ5JRC9 791 aa17.25■□□□□ 0.35
TNFRSF11A-206ENST00000617039 EEF2KMTQ96G04 330 aa17.25■□□□□ 0.35
TNFRSF11A-206ENST00000617039 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.25■□□□□ 0.35
TNFRSF11A-206ENST00000617039 V9GYY5 206 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF11A-206ENST00000617039 UQCRHLA0A096LP55 91 aa17.25■□□□□ 0.35
TNFRSF11A-206ENST00000617039 WTIPA6NIX2 430 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF11A-206ENST00000617039 UQCRHP07919 91 aa17.25■□□□□ 0.35
TNFRSF11A-206ENST00000617039 CCDC186Q7Z3E2 898 aa17.25■□□□□ 0.35
TNFRSF11A-206ENST00000617039 MAP4K1Q92918 833 aa17.25■□□□□ 0.35
TNFRSF11A-206ENST00000617039 COPRSQ9NQ92 184 aa17.25■□□□□ 0.35
TNFRSF11A-206ENST00000617039 TRIM34Q9BYJ4 488 aa17.25■□□□□ 0.35
TNFRSF11A-206ENST00000617039 SCRN1Q12765 414 aa17.24■□□□□ 0.35
TNFRSF11A-206ENST00000617039 NR1I2O75469 434 aa17.24■□□□□ 0.35
TNFRSF11A-206ENST00000617039 PRKCSHP14314 528 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF11A-206ENST00000617039 USPL1Q5W0Q7 1092 aa17.24■□□□□ 0.35
TNFRSF11A-206ENST00000617039 CCNL1Q9UK58 526 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF11A-206ENST00000617039 CFAP100Q494V2 611 aa17.24■□□□□ 0.35
TNFRSF11A-206ENST00000617039 NAA16Q6N069 864 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF11A-206ENST00000617039 CDC5LQ99459 802 aaKnown RBP17.24■□□□□ 0.35
TNFRSF11A-206ENST00000617039 HMG20BQ9P0W2 317 aa17.24■□□□□ 0.35
TNFRSF11A-206ENST00000617039 COBLO75128 1261 aa17.23■□□□□ 0.35
TNFRSF11A-206ENST00000617039 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
TNFRSF11A-206ENST00000617039 RPGRQ92834 1020 aaKnown RBP17.23■□□□□ 0.35
TNFRSF11A-206ENST00000617039 CARD10Q9BWT7 1032 aa17.23■□□□□ 0.35
TNFRSF11A-206ENST00000617039 BAZ2BQ9UIF8 2168 aaKnown RBP17.23■□□□□ 0.35
TNFRSF11A-206ENST00000617039 TOM1O60784 492 aa17.23■□□□□ 0.35
TNFRSF11A-206ENST00000617039 CTSWP56202 376 aa17.23■□□□□ 0.35
TNFRSF11A-206ENST00000617039 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
TNFRSF11A-206ENST00000617039 INTS4Q96HW7 963 aaKnown RBP17.23■□□□□ 0.35
TNFRSF11A-206ENST00000617039 CCDC87Q9NVE4 849 aa17.23■□□□□ 0.35
TNFRSF11A-206ENST00000617039 MAST3O60307 1309 aa17.22■□□□□ 0.35
TNFRSF11A-206ENST00000617039 ERVV-2B6SEH9 535 aa17.22■□□□□ 0.35
TNFRSF11A-206ENST00000617039 STX17P56962 302 aa17.22■□□□□ 0.35
TNFRSF11A-206ENST00000617039 TYRO3Q06418 890 aa17.22■□□□□ 0.35
TNFRSF11A-206ENST00000617039 WTAPQ15007 396 aa17.22■□□□□ 0.35
TNFRSF11A-206ENST00000617039 ZSWIM6Q9HCJ5 1215 aa17.22■□□□□ 0.35
TNFRSF11A-206ENST00000617039 PTGS1P23219 599 aa17.22■□□□□ 0.35
TNFRSF11A-206ENST00000617039 NLRP10Q86W26 655 aa17.22■□□□□ 0.35
TNFRSF11A-206ENST00000617039 USP28Q96RU2 1077 aa17.22■□□□□ 0.35
TNFRSF11A-206ENST00000617039 MED14O60244 1454 aa17.22■□□□□ 0.35
TNFRSF11A-206ENST00000617039 CLIP2Q9UDT6 1046 aa17.22■□□□□ 0.35
TNFRSF11A-206ENST00000617039 PDE8AO60658 829 aa17.21■□□□□ 0.35
TNFRSF11A-206ENST00000617039 AOPEPQ8N6M6 819 aa17.21■□□□□ 0.35
TNFRSF11A-206ENST00000617039 HAUS7Q99871 368 aa17.21■□□□□ 0.35
TNFRSF11A-206ENST00000617039 MAPK8IP1Q9UQF2 711 aa17.21■□□□□ 0.35
TNFRSF11A-206ENST00000617039 NECTIN1Q15223 517 aa17.21■□□□□ 0.35
TNFRSF11A-206ENST00000617039 PXDNQ92626 1479 aa17.21■□□□□ 0.35
TNFRSF11A-206ENST00000617039 HEG1Q9ULI3 1381 aa17.21■□□□□ 0.35
TNFRSF11A-206ENST00000617039 OLFM4Q6UX06 510 aa17.2■□□□□ 0.34
TNFRSF11A-206ENST00000617039 GIGYF2Q6Y7W6 1299 aaKnown RBP17.2■□□□□ 0.34
TNFRSF11A-206ENST00000617039 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF11A-206ENST00000617039 ZBTB38Q8NAP3 1195 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF11A-206ENST00000617039 SSRP1Q08945 709 aaKnown RBP17.2■□□□□ 0.34
TNFRSF11A-206ENST00000617039 HMGB1P09429 215 aaKnown RBP17.2■□□□□ 0.34
TNFRSF11A-206ENST00000617039 DYNLL1P63167 89 aaKnown RBP17.2■□□□□ 0.34
TNFRSF11A-206ENST00000617039 LEO1Q8WVC0 666 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF11A-206ENST00000617039 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
TNFRSF11A-206ENST00000617039 DLC1Q96QB1 1528 aa17.2■□□□□ 0.34
TNFRSF11A-206ENST00000617039 C1orf167Q5SNV9 1468 aa17.2■□□□□ 0.34
TNFRSF11A-206ENST00000617039 SPATA5Q8NB90 893 aa17.19■□□□□ 0.34
TNFRSF11A-206ENST00000617039 CNNM3Q8NE01 707 aa17.19■□□□□ 0.34
TNFRSF11A-206ENST00000617039 TTLL11Q8NHH1 800 aa17.19■□□□□ 0.34
TNFRSF11A-206ENST00000617039 MCAMP43121 646 aa17.19■□□□□ 0.34
TNFRSF11A-206ENST00000617039 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
TNFRSF11A-206ENST00000617039 IQCA1Q86XH1 822 aa17.19■□□□□ 0.34
TNFRSF11A-206ENST00000617039 APPBP2Q92624 585 aa17.19■□□□□ 0.34
TNFRSF11A-206ENST00000617039 SLC3A2P08195 630 aaKnown RBP17.19■□□□□ 0.34
TNFRSF11A-206ENST00000617039 PDE6AP16499 860 aa17.19■□□□□ 0.34
TNFRSF11A-206ENST00000617039 PRDM10Q9NQV6 1147 aa17.19■□□□□ 0.34
TNFRSF11A-206ENST00000617039 ERBB4Q15303 1308 aa17.19■□□□□ 0.34
TNFRSF11A-206ENST00000617039 NLRP5P59047 1200 aa17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 CEP57L1Q8IYX8 460 aa17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 PIH1D3Q9NQM4 214 aaKnown RBP17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 XBP1P17861 261 aa17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 ENOX2Q16206 610 aaKnown RBP17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 ERFEQ4G0M1 354 aa17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 CLIC6Q96NY7 704 aa17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 UBE2Q2LH0YL09 131 aa17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 ECM2O94769 699 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 CABP5Q9NP86 173 aa17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 MAP3K15Q6ZN16 1313 aa17.18■□□□□ 0.34
TNFRSF11A-206ENST00000617039 MAGEB6P1A0A0J9YX57 407 aa17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 USP21Q9UK80 565 aa17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 PDE8BO95263 885 aa17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 LRMPQ12912 555 aa17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 STOX1Q6ZVD7 989 aa17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 V9GY48 417 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 DIP2AQ14689 1571 aa17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 CHRNDQ07001 517 aa17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 PUM3Q15397 648 aaKnown RBP17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 ZNF444Q8N0Y2 327 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 CTCFLQ8NI51 663 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF11A-206ENST00000617039 RTN1Q16799 776 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms