RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 USP42Q9H9J4 1324 aaKnown RBP17.92■□□□□ 0.46
NOP56-220ENST00000616692 RPS6KA3P51812 740 aa17.92■□□□□ 0.46
NOP56-220ENST00000616692 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
NOP56-220ENST00000616692 GRIK3Q13003 919 aa17.91■□□□□ 0.46
NOP56-220ENST00000616692 PDCD2Q16342 344 aaPredicted RBP17.91■□□□□ 0.46
NOP56-220ENST00000616692 ZNF483Q8TF39 744 aaPredicted RBP17.91■□□□□ 0.46
NOP56-220ENST00000616692 CHCHD3Q9NX63 227 aaKnown RBP17.91■□□□□ 0.46
NOP56-220ENST00000616692 V9GYY5 206 aaPredicted RBP17.91■□□□□ 0.46
NOP56-220ENST00000616692 ADAMTS7Q9UKP4 1686 aa17.91■□□□□ 0.46
NOP56-220ENST00000616692 ARHGAP27Q6ZUM4 889 aa17.91■□□□□ 0.46
NOP56-220ENST00000616692 SMIM5Q71RC9 77 aa17.91■□□□□ 0.46
NOP56-220ENST00000616692 C22orf23Q9BZE7 217 aa17.91■□□□□ 0.46
NOP56-220ENST00000616692 ZSCAN16Q9H4T2 348 aaPredicted RBP17.91■□□□□ 0.46
NOP56-220ENST00000616692 A0A0G2JLW4 131 aa17.9■□□□□ 0.46
NOP56-220ENST00000616692 FCHSD2O94868 740 aa17.9■□□□□ 0.46
NOP56-220ENST00000616692 KCNA3P22001 575 aa17.9■□□□□ 0.46
NOP56-220ENST00000616692 RPUSD2Q8IZ73 545 aaKnown RBP17.9■□□□□ 0.46
NOP56-220ENST00000616692 TBC1D2BQ9UPU7 963 aa17.9■□□□□ 0.46
NOP56-220ENST00000616692 TNRC6CQ9HCJ0 1690 aaKnown RBP17.89■□□□□ 0.46
NOP56-220ENST00000616692 IVLP07476 585 aa17.89■□□□□ 0.45
NOP56-220ENST00000616692 CRKLP46109 303 aaKnown RBP17.89■□□□□ 0.45
NOP56-220ENST00000616692 MNAT1P51948 309 aa17.89■□□□□ 0.45
NOP56-220ENST00000616692 ST5P78524 1137 aa17.89■□□□□ 0.45
NOP56-220ENST00000616692 SLC5A9Q2M3M2 681 aa17.89■□□□□ 0.45
NOP56-220ENST00000616692 DALRD3Q5D0E6 543 aaKnown RBP17.89■□□□□ 0.45
NOP56-220ENST00000616692 AKAP4Q5JQC9 854 aa17.89■□□□□ 0.45
NOP56-220ENST00000616692 TTLL5Q6EMB2 1281 aa17.89■□□□□ 0.45
NOP56-220ENST00000616692 CCDC112Q8NEF3 446 aa17.89■□□□□ 0.45
NOP56-220ENST00000616692 GNL3LQ9NVN8 582 aaKnown RBP17.89■□□□□ 0.45
NOP56-220ENST00000616692 CORO7P57737 925 aa17.89■□□□□ 0.45
NOP56-220ENST00000616692 RNF214Q8ND24 703 aa17.89■□□□□ 0.45
NOP56-220ENST00000616692 TRIM6Q9C030 488 aaPredicted RBP17.89■□□□□ 0.45
NOP56-220ENST00000616692 MYH14Q7Z406 1995 aaKnown RBP17.89■□□□□ 0.45
NOP56-220ENST00000616692 SGSM2O43147 1006 aa17.88■□□□□ 0.45
NOP56-220ENST00000616692 OATP04181 439 aa17.88■□□□□ 0.45
NOP56-220ENST00000616692 TM4SF1P30408 202 aa17.88■□□□□ 0.45
NOP56-220ENST00000616692 ELF1P32519 619 aa17.88■□□□□ 0.45
NOP56-220ENST00000616692 ICA1Q05084 483 aa17.88■□□□□ 0.45
NOP56-220ENST00000616692 SPATS2LQ9NUQ6 558 aaKnown RBP17.88■□□□□ 0.45
NOP56-220ENST00000616692 NRXN2Q9P2S2 1712 aa17.88■□□□□ 0.45
NOP56-220ENST00000616692 NAT1P18440 290 aa17.88■□□□□ 0.45
NOP56-220ENST00000616692 GET4Q7L5D6 327 aaPredicted RBP17.88■□□□□ 0.45
NOP56-220ENST00000616692 MMTAG2Q9BU76 263 aaKnown RBP17.88■□□□□ 0.45
NOP56-220ENST00000616692 PDZRN3Q9UPQ7 1066 aa17.88■□□□□ 0.45
NOP56-220ENST00000616692 IL13P35225 146 aa17.87■□□□□ 0.45
NOP56-220ENST00000616692 KCNB2Q92953 911 aa17.87■□□□□ 0.45
NOP56-220ENST00000616692 SOS1Q07889 1333 aaPredicted RBP17.87■□□□□ 0.45
NOP56-220ENST00000616692 PES1O00541 588 aaKnown RBP17.87■□□□□ 0.45
NOP56-220ENST00000616692 USP8P40818 1118 aa17.87■□□□□ 0.45
NOP56-220ENST00000616692 RBBP5Q15291 538 aaKnown RBP17.87■□□□□ 0.45
NOP56-220ENST00000616692 ZRSR1Q15695 479 aaKnown RBP17.87■□□□□ 0.45
NOP56-220ENST00000616692 LEKR1Q6ZMV7 388 aa17.87■□□□□ 0.45
NOP56-220ENST00000616692 EFCAB13Q8IY85 973 aa17.87■□□□□ 0.45
NOP56-220ENST00000616692 DNAJC5GQ8N7S2 189 aa17.87■□□□□ 0.45
NOP56-220ENST00000616692 DRAXINQ8NBI3 349 aaPredicted RBP17.87■□□□□ 0.45
NOP56-220ENST00000616692 FHOD1Q9Y613 1164 aa17.87■□□□□ 0.45
NOP56-220ENST00000616692 WDR90Q96KV7 1748 aa17.86■□□□□ 0.45
NOP56-220ENST00000616692 HTATSF1O43719 755 aaKnown RBP17.86■□□□□ 0.45
NOP56-220ENST00000616692 NME8Q8N427 588 aa17.86■□□□□ 0.45
NOP56-220ENST00000616692 ARPC5LQ9BPX5 153 aa17.86■□□□□ 0.45
NOP56-220ENST00000616692 BLOC1S6Q9UL45 172 aa17.86■□□□□ 0.45
NOP56-220ENST00000616692 AP1G2O75843 785 aa17.86■□□□□ 0.45
NOP56-220ENST00000616692 ECM2O94769 699 aaPredicted RBP17.86■□□□□ 0.45
NOP56-220ENST00000616692 GCFC2P16383 781 aaKnown RBP17.86■□□□□ 0.45
NOP56-220ENST00000616692 PLA2G4AP47712 749 aa17.86■□□□□ 0.45
NOP56-220ENST00000616692 C9orf131Q5VYM1 1079 aa17.86■□□□□ 0.45
NOP56-220ENST00000616692 INTS5Q6P9B9 1019 aaKnown RBP17.86■□□□□ 0.45
NOP56-220ENST00000616692 NCAPG2Q86XI2 1143 aa17.86■□□□□ 0.45
NOP56-220ENST00000616692 KCNV2Q8TDN2 545 aa17.86■□□□□ 0.45
NOP56-220ENST00000616692 SLX1AQ9BQ83 275 aa17.86■□□□□ 0.45
NOP56-220ENST00000616692 LMBRD1Q9NUN5 540 aa17.86■□□□□ 0.45
NOP56-220ENST00000616692 ZNF280DQ6N043 979 aa17.85■□□□□ 0.45
NOP56-220ENST00000616692 SYCE3A1L190 88 aa17.85■□□□□ 0.45
NOP56-220ENST00000616692 SNUPNO95149 360 aaKnown RBP17.85■□□□□ 0.45
NOP56-220ENST00000616692 GBP6Q6ZN66 633 aa17.85■□□□□ 0.45
NOP56-220ENST00000616692 TMX4Q9H1E5 349 aaPredicted RBP17.85■□□□□ 0.45
NOP56-220ENST00000616692 POLRMTO00411 1230 aaKnown RBP17.85■□□□□ 0.45
NOP56-220ENST00000616692 POLR3GO15318 223 aaPredicted RBP17.85■□□□□ 0.45
NOP56-220ENST00000616692 CCNHP51946 323 aaPredicted RBP17.85■□□□□ 0.45
NOP56-220ENST00000616692 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
NOP56-220ENST00000616692 LZTS2Q9BRK4 669 aa17.85■□□□□ 0.45
NOP56-220ENST00000616692 SLC52A2Q9HAB3 445 aa17.85■□□□□ 0.45
NOP56-220ENST00000616692 PYCARDQ9ULZ3 195 aa17.85■□□□□ 0.45
NOP56-220ENST00000616692 RIPOR2Q9Y4F9 1068 aa17.85■□□□□ 0.45
NOP56-220ENST00000616692 DLEC1Q9Y238 1755 aa17.84■□□□□ 0.45
NOP56-220ENST00000616692 DDR1Q08345 913 aa17.84■□□□□ 0.45
NOP56-220ENST00000616692 CDCA7LQ96GN5 454 aa17.84■□□□□ 0.45
NOP56-220ENST00000616692 KIF2CQ99661 725 aa17.84■□□□□ 0.45
NOP56-220ENST00000616692 SUN2Q9UH99 717 aa17.84■□□□□ 0.45
NOP56-220ENST00000616692 ACTN2P35609 894 aa17.84■□□□□ 0.45
NOP56-220ENST00000616692 CCDC30Q5VVM6 783 aa17.84■□□□□ 0.45
NOP56-220ENST00000616692 DZIP3Q86Y13 1208 aaKnown RBP17.84■□□□□ 0.45
NOP56-220ENST00000616692 A1CFQ9NQ94 594 aaKnown RBP17.84■□□□□ 0.45
NOP56-220ENST00000616692 PSD3Q9NYI0 1048 aa17.84■□□□□ 0.45
NOP56-220ENST00000616692 RBM27Q9P2N5 1060 aaKnown RBP17.84■□□□□ 0.45
NOP56-220ENST00000616692 NARFQ9UHQ1 456 aa17.84■□□□□ 0.45
NOP56-220ENST00000616692 ZPR1O75312 459 aa17.83■□□□□ 0.44
NOP56-220ENST00000616692 ARMC3Q5W041 872 aa17.83■□□□□ 0.44
NOP56-220ENST00000616692 SULT6B1Q6IMI4 303 aa17.83■□□□□ 0.44
NOP56-220ENST00000616692 ARMC2Q8NEN0 867 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms