RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 EAF2Q96CJ1 260 aaPredicted RBP39.25■■■■□ 3.87
FMR1-216ENST00000616614 EGFRP00533 1210 aa39.24■■■■□ 3.87
FMR1-216ENST00000616614 IL1RAPL2Q9NP60 686 aa39.24■■■■□ 3.87
FMR1-216ENST00000616614 TOMM70O94826 608 aa39.23■■■■□ 3.87
FMR1-216ENST00000616614 C16orf71Q8IYS4 520 aaPredicted RBP39.23■■■■□ 3.87
FMR1-216ENST00000616614 ADARB2Q9NS39 739 aaKnown RBP39.23■■■■□ 3.87
FMR1-216ENST00000616614 CHAF1AQ13111 956 aaPredicted RBP39.23■■■■□ 3.87
FMR1-216ENST00000616614 EAPPQ56P03 285 aaPredicted RBP39.23■■■■□ 3.87
FMR1-216ENST00000616614 SAMD7Q7Z3H4 446 aa39.23■■■■□ 3.87
FMR1-216ENST00000616614 TRPM4Q8TD43 1214 aa39.23■■■■□ 3.87
FMR1-216ENST00000616614 DBNDD2Q9BQY9 259 aa39.23■■■■□ 3.87
FMR1-216ENST00000616614 DCTPP1Q9H773 170 aa39.23■■■■□ 3.87
FMR1-216ENST00000616614 COL1A1P02452 1464 aaPredicted RBP39.22■■■■□ 3.87
FMR1-216ENST00000616614 ARAP2Q8WZ64 1704 aa39.22■■■■□ 3.87
FMR1-216ENST00000616614 H7C1D1 291 aa39.22■■■■□ 3.87
FMR1-216ENST00000616614 RAB11FIP3O75154 756 aa39.22■■■■□ 3.87
FMR1-216ENST00000616614 FRAT2O75474 233 aaPredicted RBP39.22■■■■□ 3.87
FMR1-216ENST00000616614 HIRAP54198 1017 aaPredicted RBP39.22■■■■□ 3.87
FMR1-216ENST00000616614 ZNF280AP59817 542 aaPredicted RBP39.22■■■■□ 3.87
FMR1-216ENST00000616614 KIF1BPQ96EK5 621 aa39.22■■■■□ 3.87
FMR1-216ENST00000616614 TLR7Q9NYK1 1049 aaKnown RBP39.22■■■■□ 3.87
FMR1-216ENST00000616614 MYO3BQ8WXR4 1341 aa39.21■■■■□ 3.87
FMR1-216ENST00000616614 USP17L8P0C7I0 530 aa39.21■■■■□ 3.87
FMR1-216ENST00000616614 AAMPQ13685 434 aa39.21■■■■□ 3.87
FMR1-216ENST00000616614 PNMA8AQ86V59 439 aaPredicted RBP39.21■■■■□ 3.87
FMR1-216ENST00000616614 KIAA0825Q8IV33 1275 aa39.21■■■■□ 3.87
FMR1-216ENST00000616614 CCDC8Q9H0W5 538 aaPredicted RBP39.21■■■■□ 3.87
FMR1-216ENST00000616614 FKBP1AP62942 108 aaKnown RBP39.2■■■■□ 3.87
FMR1-216ENST00000616614 DBNLQ9UJU6 430 aaKnown RBP39.2■■■■□ 3.87
FMR1-216ENST00000616614 GRIK5Q16478 980 aa39.19■■■■□ 3.86
FMR1-216ENST00000616614 USP50Q70EL3 339 aaPredicted RBP39.19■■■■□ 3.86
FMR1-216ENST00000616614 TBC1D10BQ4KMP7 808 aaPredicted RBP39.18■■■■□ 3.86
FMR1-216ENST00000616614 MFSD14BQ5SR56 506 aa39.18■■■■□ 3.86
FMR1-216ENST00000616614 GNL3LQ9NVN8 582 aaKnown RBP39.18■■■■□ 3.86
FMR1-216ENST00000616614 RBM46Q8TBY0 533 aaKnown RBP39.17■■■■□ 3.86
FMR1-216ENST00000616614 ZBTB22O15209 634 aa39.16■■■■□ 3.86
FMR1-216ENST00000616614 RASGRF1Q13972 1273 aa39.16■■■■□ 3.86
FMR1-216ENST00000616614 GORABQ5T7V8 394 aa39.16■■■■□ 3.86
FMR1-216ENST00000616614 RBM26Q5T8P6 1007 aaKnown RBP39.16■■■■□ 3.86
FMR1-216ENST00000616614 F8W031 263 aaPredicted RBP39.15■■■■□ 3.86
FMR1-216ENST00000616614 AACSQ86V21 672 aa39.15■■■■□ 3.86
FMR1-216ENST00000616614 LDHDQ86WU2 507 aa39.14■■■■□ 3.86
FMR1-216ENST00000616614 SEMA3EO15041 775 aa39.14■■■■□ 3.86
FMR1-216ENST00000616614 SMARCA5O60264 1052 aaPredicted RBP39.14■■■■□ 3.86
FMR1-216ENST00000616614 SCARF1Q14162 830 aa39.14■■■■□ 3.86
FMR1-216ENST00000616614 MYOZ2Q9NPC6 264 aa39.14■■■■□ 3.86
FMR1-216ENST00000616614 ADAMTSL1Q8N6G6 1762 aa39.13■■■■□ 3.85
FMR1-216ENST00000616614 HDAC1Q13547 482 aaPredicted RBP39.13■■■■□ 3.85
FMR1-216ENST00000616614 BCL11AQ9H165 835 aa39.13■■■■□ 3.85
FMR1-216ENST00000616614 DENND2AQ9ULE3 1009 aa39.13■■■■□ 3.85
FMR1-216ENST00000616614 ARID4AP29374 1257 aaPredicted RBP39.12■■■■□ 3.85
FMR1-216ENST00000616614 KIF4BQ2VIQ3 1234 aa39.12■■■■□ 3.85
FMR1-216ENST00000616614 CLASRPQ8N2M8 674 aaKnown RBP39.12■■■■□ 3.85
FMR1-216ENST00000616614 CLEC11AQ9Y240 323 aa39.12■■■■□ 3.85
FMR1-216ENST00000616614 PI16Q6UXB8 463 aa39.11■■■■□ 3.85
FMR1-216ENST00000616614 OGFOD1Q8N543 542 aa39.11■■■■□ 3.85
FMR1-216ENST00000616614 TBC1D22AQ8WUA7 517 aa39.11■■■■□ 3.85
FMR1-216ENST00000616614 LRRCC1Q9C099 1032 aa39.11■■■■□ 3.85
FMR1-216ENST00000616614 CHADLQ6NUI6 762 aa39.1■■■■□ 3.85
FMR1-216ENST00000616614 HMG20BQ9P0W2 317 aa39.1■■■■□ 3.85
FMR1-216ENST00000616614 C1QTNF8P60827 252 aa39.09■■■■□ 3.85
FMR1-216ENST00000616614 SMC1BQ8NDV3 1235 aa39.09■■■■□ 3.85
FMR1-216ENST00000616614 WDR66Q8TBY9 1149 aa39.09■■■■□ 3.85
FMR1-216ENST00000616614 MCAMP43121 646 aa39.08■■■■□ 3.85
FMR1-216ENST00000616614 MAP1SQ66K74 1059 aaPredicted RBP39.08■■■■□ 3.85
FMR1-216ENST00000616614 PGAP2Q9UHJ9 254 aa39.08■■■■□ 3.85
FMR1-216ENST00000616614 PCDHAC2Q9Y5I4 1007 aa39.08■■■■□ 3.85
FMR1-216ENST00000616614 ASTN2O75129 1339 aaPredicted RBP39.08■■■■□ 3.85
FMR1-216ENST00000616614 CCDC158Q5M9N0 1113 aa39.07■■■■□ 3.85
FMR1-216ENST00000616614 TTC39AQ5SRH9 613 aa39.07■■■■□ 3.85
FMR1-216ENST00000616614 TTF2Q9UNY4 1162 aaKnown RBP39.07■■■■□ 3.85
FMR1-216ENST00000616614 IGHDP01880 384 aa39.06■■■■□ 3.84
FMR1-216ENST00000616614 HDAC9Q9UKV0 1011 aa39.06■■■■□ 3.84
FMR1-216ENST00000616614 UQCRFS1P1P0C7P4 283 aa39.06■■■■□ 3.84
FMR1-216ENST00000616614 FSTL1Q12841 308 aa39.06■■■■□ 3.84
FMR1-216ENST00000616614 SPATA5Q8NB90 893 aa39.06■■■■□ 3.84
FMR1-216ENST00000616614 PDS5AQ29RF7 1337 aaKnown RBP39.05■■■■□ 3.84
FMR1-216ENST00000616614 NBPF9Q3BBW0 867 aa39.05■■■■□ 3.84
FMR1-216ENST00000616614 ZNF512BQ96KM6 892 aaPredicted RBP39.05■■■■□ 3.84
FMR1-216ENST00000616614 SALL1Q9NSC2 1324 aa39.05■■■■□ 3.84
FMR1-216ENST00000616614 MMP14P50281 582 aa39.04■■■■□ 3.84
FMR1-216ENST00000616614 ZBED3Q96IU2 234 aaPredicted RBP39.04■■■■□ 3.84
FMR1-216ENST00000616614 IFIT2P09913 472 aaKnown RBP39.03■■■■□ 3.84
FMR1-216ENST00000616614 PRDX5P30044 214 aa39.03■■■■□ 3.84
FMR1-216ENST00000616614 ZC3H15Q8WU90 426 aaKnown RBP39.03■■■■□ 3.84
FMR1-216ENST00000616614 SNRKQ9NRH2 765 aa39.03■■■■□ 3.84
FMR1-216ENST00000616614 WNT10BO00744 389 aa39.02■■■■□ 3.84
FMR1-216ENST00000616614 CFAP100Q494V2 611 aa39.01■■■■□ 3.84
FMR1-216ENST00000616614 CNTROBQ8N137 903 aa39.01■■■■□ 3.84
FMR1-216ENST00000616614 SUGT1Q9Y2Z0 365 aa39.01■■■■□ 3.84
FMR1-216ENST00000616614 ITGBL1O95965 494 aaPredicted RBP39■■■■□ 3.83
FMR1-216ENST00000616614 TBC1D9Q6ZT07 1266 aa39■■■■□ 3.83
FMR1-216ENST00000616614 RWDD1Q9H446 243 aaPredicted RBP39■■■■□ 3.83
FMR1-216ENST00000616614 AOX1Q06278 1338 aa38.99■■■■□ 3.83
FMR1-216ENST00000616614 MTMR14Q8NCE2 650 aa38.99■■■■□ 3.83
FMR1-216ENST00000616614 GCC1Q96CN9 775 aa38.98■■■■□ 3.83
FMR1-216ENST00000616614 PRMT6Q96LA8 375 aaPredicted RBP38.98■■■■□ 3.83
FMR1-216ENST00000616614 SERPINA10Q9UK55 444 aa38.98■■■■□ 3.83
FMR1-216ENST00000616614 DLGAP5Q15398 846 aa38.97■■■■□ 3.83
FMR1-216ENST00000616614 ABCF2Q9UG63 623 aa38.97■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 482.9 ms