RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 RASSF10A6NK89 507 aa27.6■■■□□ 2.01
CBWD3-212ENST00000616550 CERS5Q8N5B7 392 aa27.6■■■□□ 2.01
CBWD3-212ENST00000616550 CEP126Q9P2H0 1117 aa27.6■■■□□ 2.01
CBWD3-212ENST00000616550 JAG2Q9Y219 1238 aa27.6■■■□□ 2.01
CBWD3-212ENST00000616550 ADM5C9JUS6 153 aa27.59■■■□□ 2.01
CBWD3-212ENST00000616550 SRGAP3O43295 1099 aa27.59■■■□□ 2.01
CBWD3-212ENST00000616550 COPRSQ9NQ92 184 aa27.59■■■□□ 2.01
CBWD3-212ENST00000616550 PA2G4Q9UQ80 394 aaKnown RBP27.59■■■□□ 2.01
CBWD3-212ENST00000616550 TLL2Q9Y6L7 1015 aa27.59■■■□□ 2.01
CBWD3-212ENST00000616550 FAM205AQ6ZU69 1335 aa27.59■■■□□ 2.01
CBWD3-212ENST00000616550 FRAT2O75474 233 aaPredicted RBP27.58■■■□□ 2.01
CBWD3-212ENST00000616550 SLC5A1P13866 664 aa27.58■■■□□ 2.01
CBWD3-212ENST00000616550 FGFR2P21802 821 aa27.58■■■□□ 2.01
CBWD3-212ENST00000616550 IL15P40933 162 aaPredicted RBP27.58■■■□□ 2.01
CBWD3-212ENST00000616550 VEGFBP49765 207 aa27.58■■■□□ 2.01
CBWD3-212ENST00000616550 NBPF9Q3BBW0 867 aa27.58■■■□□ 2.01
CBWD3-212ENST00000616550 F8W031 263 aaPredicted RBP27.57■■■□□ 2
CBWD3-212ENST00000616550 WNT10BO00744 389 aa27.57■■■□□ 2
CBWD3-212ENST00000616550 MTX1Q13505 466 aa27.57■■■□□ 2
CBWD3-212ENST00000616550 DLK2Q6UY11 383 aa27.57■■■□□ 2
CBWD3-212ENST00000616550 LPIN2Q92539 896 aa27.57■■■□□ 2
CBWD3-212ENST00000616550 PITPNM2Q9BZ72 1349 aa27.57■■■□□ 2
CBWD3-212ENST00000616550 BCAMP50895 628 aa27.56■■■□□ 2
CBWD3-212ENST00000616550 MFSD14BQ5SR56 506 aa27.56■■■□□ 2
CBWD3-212ENST00000616550 ITPRIPQ8IWB1 547 aa27.56■■■□□ 2
CBWD3-212ENST00000616550 PAXIP1Q6ZW49 1069 aaPredicted RBP27.55■■■□□ 2
CBWD3-212ENST00000616550 IQSEC3Q9UPP2 1182 aaPredicted RBP27.55■■■□□ 2
CBWD3-212ENST00000616550 RLBP1P12271 317 aa27.54■■■□□ 2
CBWD3-212ENST00000616550 DLGAP5Q15398 846 aa27.54■■■□□ 2
CBWD3-212ENST00000616550 SAPCD2Q86UD0 394 aa27.54■■■□□ 2
CBWD3-212ENST00000616550 WDR33Q9C0J8 1336 aaKnown RBP27.53■■■□□ 2
CBWD3-212ENST00000616550 ECE1P42892 770 aa27.53■■■□□ 2
CBWD3-212ENST00000616550 ATP2B3Q16720 1220 aa27.53■■■□□ 2
CBWD3-212ENST00000616550 MS4A1P11836 297 aa27.52■■■□□ 2
CBWD3-212ENST00000616550 CHAF1AQ13111 956 aaPredicted RBP27.52■■■□□ 2
CBWD3-212ENST00000616550 C2orf69Q8N8R5 385 aa27.52■■■□□ 2
CBWD3-212ENST00000616550 MTMR14Q8NCE2 650 aa27.51■■□□□ 1.99
CBWD3-212ENST00000616550 TBC1D22AQ8WUA7 517 aa27.51■■□□□ 1.99
CBWD3-212ENST00000616550 CDCA5Q96FF9 252 aa27.51■■□□□ 1.99
CBWD3-212ENST00000616550 ZBED3Q96IU2 234 aaPredicted RBP27.51■■□□□ 1.99
CBWD3-212ENST00000616550 GBA2Q9HCG7 927 aaPredicted RBP27.51■■□□□ 1.99
CBWD3-212ENST00000616550 RBM5P52756 815 aaKnown RBP eCLIP27.5■■□□□ 1.99
CBWD3-212ENST00000616550 CFAP100Q494V2 611 aa27.5■■□□□ 1.99
CBWD3-212ENST00000616550 HHIPL1Q96JK4 782 aa27.5■■□□□ 1.99
CBWD3-212ENST00000616550 CAPNS2Q96L46 248 aa27.5■■□□□ 1.99
CBWD3-212ENST00000616550 RCAN3Q9UKA8 241 aa27.5■■□□□ 1.99
CBWD3-212ENST00000616550 TTF2Q9UNY4 1162 aaKnown RBP27.5■■□□□ 1.99
CBWD3-212ENST00000616550 SCAF8Q9UPN6 1271 aaKnown RBP27.5■■□□□ 1.99
CBWD3-212ENST00000616550 PNMA6EA0A0J9YXQ4 647 aa27.49■■□□□ 1.99
CBWD3-212ENST00000616550 ZBTB7BO15156 539 aaPredicted RBP27.49■■□□□ 1.99
CBWD3-212ENST00000616550 MYO1BO43795 1136 aa27.49■■□□□ 1.99
CBWD3-212ENST00000616550 GRM1Q13255 1194 aa27.49■■□□□ 1.99
CBWD3-212ENST00000616550 CYP4F22Q6NT55 531 aa27.49■■□□□ 1.99
CBWD3-212ENST00000616550 HSPA1AP0DMV8 641 aaKnown RBP27.48■■□□□ 1.99
CBWD3-212ENST00000616550 HSPA1BP0DMV9 641 aaKnown RBP27.48■■□□□ 1.99
CBWD3-212ENST00000616550 HUNKP57058 714 aa27.48■■□□□ 1.99
CBWD3-212ENST00000616550 APOBEC3FQ8IUX4 373 aaKnown RBP27.48■■□□□ 1.99
CBWD3-212ENST00000616550 PANK1Q8TE04 598 aa27.48■■□□□ 1.99
CBWD3-212ENST00000616550 GNL3LQ9NVN8 582 aaKnown RBP27.48■■□□□ 1.99
CBWD3-212ENST00000616550 AKAP2Q9Y2D5 859 aa27.48■■□□□ 1.99
CBWD3-212ENST00000616550 SPDYE2BA6NHP3 402 aa27.46■■□□□ 1.99
CBWD3-212ENST00000616550 SPDYE6P0CI01 402 aa27.46■■□□□ 1.99
CBWD3-212ENST00000616550 ATP8B2P98198 1209 aa27.46■■□□□ 1.99
CBWD3-212ENST00000616550 G3BP1Q13283 466 aaKnown RBP eCLIP27.46■■□□□ 1.99
CBWD3-212ENST00000616550 PRMT6Q96LA8 375 aaPredicted RBP27.46■■□□□ 1.99
CBWD3-212ENST00000616550 C1orf115Q9H7X2 142 aa27.46■■□□□ 1.99
CBWD3-212ENST00000616550 SERPINA10Q9UK55 444 aa27.46■■□□□ 1.99
CBWD3-212ENST00000616550 PCDHAC2Q9Y5I4 1007 aa27.46■■□□□ 1.99
CBWD3-212ENST00000616550 MYH13Q9UKX3 1938 aa27.45■■□□□ 1.99
CBWD3-212ENST00000616550 ARAP2Q8WZ64 1704 aa27.45■■□□□ 1.99
CBWD3-212ENST00000616550 TFCP2Q12800 502 aa27.45■■□□□ 1.98
CBWD3-212ENST00000616550 ECM29Q5VYK3 1845 aa27.44■■□□□ 1.98
CBWD3-212ENST00000616550 TIMM10P62072 90 aa27.44■■□□□ 1.98
CBWD3-212ENST00000616550 PRAMEF18Q5VWM3 479 aa27.44■■□□□ 1.98
CBWD3-212ENST00000616550 WDR66Q8TBY9 1149 aa27.44■■□□□ 1.98
CBWD3-212ENST00000616550 NF2P35240 595 aa27.43■■□□□ 1.98
CBWD3-212ENST00000616550 POLA2Q14181 598 aa27.43■■□□□ 1.98
CBWD3-212ENST00000616550 SUGT1Q9Y2Z0 365 aa27.43■■□□□ 1.98
CBWD3-212ENST00000616550 CRKP46108 304 aa27.42■■□□□ 1.98
CBWD3-212ENST00000616550 FKBP1BP68106 108 aa27.42■■□□□ 1.98
CBWD3-212ENST00000616550 SSH3Q8TE77 659 aa27.42■■□□□ 1.98
CBWD3-212ENST00000616550 A0A1B0GUL7 405 aa27.41■■□□□ 1.98
CBWD3-212ENST00000616550 CLRN2A0PK11 232 aa27.41■■□□□ 1.98
CBWD3-212ENST00000616550 ADORA1P30542 326 aa27.41■■□□□ 1.98
CBWD3-212ENST00000616550 HDLBPQ00341 1268 aaKnown RBP27.41■■□□□ 1.98
CBWD3-212ENST00000616550 MAP2K1Q02750 393 aaPredicted RBP27.41■■□□□ 1.98
CBWD3-212ENST00000616550 GRIK5Q16478 980 aa27.41■■□□□ 1.98
CBWD3-212ENST00000616550 RGMBQ6NW40 437 aa27.41■■□□□ 1.98
CBWD3-212ENST00000616550 AIDAQ96BJ3 306 aa27.41■■□□□ 1.98
CBWD3-212ENST00000616550 MAST3O60307 1309 aa27.41■■□□□ 1.98
CBWD3-212ENST00000616550 SEMA3EO15041 775 aa27.4■■□□□ 1.98
CBWD3-212ENST00000616550 MAP2K2P36507 400 aa27.4■■□□□ 1.98
CBWD3-212ENST00000616550 PHKA1P46020 1223 aa27.4■■□□□ 1.98
CBWD3-212ENST00000616550 CCDC102BQ68D86 513 aa27.4■■□□□ 1.98
CBWD3-212ENST00000616550 NEUROD6Q96NK8 337 aa27.4■■□□□ 1.98
CBWD3-212ENST00000616550 DEFB129Q9H1M3 183 aa27.4■■□□□ 1.98
CBWD3-212ENST00000616550 VEZTQ9HBM0 779 aa27.4■■□□□ 1.98
CBWD3-212ENST00000616550 DENND2AQ9ULE3 1009 aa27.4■■□□□ 1.98
CBWD3-212ENST00000616550 PCNTO95613 3336 aa27.39■■□□□ 1.98
CBWD3-212ENST00000616550 AOC2O75106 756 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms