RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 FAM13BQ9NYF5 915 aa7.41□□□□□ -1.22
NEAT1-205ENST00000616315 SLAIN2Q9P270 581 aa7.41□□□□□ -1.22
NEAT1-205ENST00000616315 SART1O43290 800 aaKnown RBP7.4□□□□□ -1.22
NEAT1-205ENST00000616315 ACPPP15309 386 aa7.4□□□□□ -1.22
NEAT1-205ENST00000616315 NLRP12P59046 1061 aa7.4□□□□□ -1.22
NEAT1-205ENST00000616315 ANKRD34AQ69YU3 496 aa7.4□□□□□ -1.22
NEAT1-205ENST00000616315 NCAPG2Q86XI2 1143 aa7.4□□□□□ -1.22
NEAT1-205ENST00000616315 ABI1Q8IZP0 508 aa7.4□□□□□ -1.22
NEAT1-205ENST00000616315 MFSD14AQ96MC6 490 aa7.4□□□□□ -1.22
NEAT1-205ENST00000616315 TMEM63CQ9P1W3 806 aa7.4□□□□□ -1.22
NEAT1-205ENST00000616315 FNDC3AQ9Y2H6 1198 aaKnown RBP7.4□□□□□ -1.22
NEAT1-205ENST00000616315 H3BRJ5 948 aa7.39□□□□□ -1.23
NEAT1-205ENST00000616315 PIP4K2BP78356 416 aa7.39□□□□□ -1.23
NEAT1-205ENST00000616315 HGSNATQ68CP4 663 aa7.39□□□□□ -1.23
NEAT1-205ENST00000616315 RNF208Q9H0X6 261 aa7.39□□□□□ -1.23
NEAT1-205ENST00000616315 CNTN3Q9P232 1028 aa7.39□□□□□ -1.23
NEAT1-205ENST00000616315 KANSL3Q9P2N6 904 aa7.39□□□□□ -1.23
NEAT1-205ENST00000616315 ARID1BQ8NFD5 2236 aaPredicted RBP7.38□□□□□ -1.23
NEAT1-205ENST00000616315 NFKBIEO00221 500 aa7.38□□□□□ -1.23
NEAT1-205ENST00000616315 SHISA5Q8N114 240 aa7.38□□□□□ -1.23
NEAT1-205ENST00000616315 WNT8BQ93098 351 aa7.38□□□□□ -1.23
NEAT1-205ENST00000616315 RUSC1Q9BVN2 902 aa7.38□□□□□ -1.23
NEAT1-205ENST00000616315 PIM2Q9P1W9 311 aa7.38□□□□□ -1.23
NEAT1-205ENST00000616315 TRPA1O75762 1119 aa7.37□□□□□ -1.23
NEAT1-205ENST00000616315 F13BP05160 661 aa7.37□□□□□ -1.23
NEAT1-205ENST00000616315 SGO2Q562F6 1265 aa7.37□□□□□ -1.23
NEAT1-205ENST00000616315 NFXL1Q6ZNB6 911 aa7.37□□□□□ -1.23
NEAT1-205ENST00000616315 HHIPQ96QV1 700 aa7.37□□□□□ -1.23
NEAT1-205ENST00000616315 ELP3Q9H9T3 547 aa7.37□□□□□ -1.23
NEAT1-205ENST00000616315 OSGEPQ9NPF4 335 aa7.37□□□□□ -1.23
NEAT1-205ENST00000616315 CXXC1Q9P0U4 656 aaPredicted RBP7.37□□□□□ -1.23
NEAT1-205ENST00000616315 STIM2Q9P246 746 aa7.37□□□□□ -1.23
NEAT1-205ENST00000616315 SALL4Q9UJQ4 1053 aa7.37□□□□□ -1.23
NEAT1-205ENST00000616315 HIF3AQ9Y2N7 669 aa7.37□□□□□ -1.23
NEAT1-205ENST00000616315 MAP4P27816 1152 aaKnown RBP7.36□□□□□ -1.23
NEAT1-205ENST00000616315 MSMPQ1L6U9 139 aa7.36□□□□□ -1.23
NEAT1-205ENST00000616315 FDX2Q6P4F2 183 aa7.36□□□□□ -1.23
NEAT1-205ENST00000616315 SLC7A3Q8WY07 619 aa7.36□□□□□ -1.23
NEAT1-205ENST00000616315 MEGF11A6BM72 1044 aa7.35□□□□□ -1.23
NEAT1-205ENST00000616315 FBXL6Q8N531 539 aa7.35□□□□□ -1.23
NEAT1-205ENST00000616315 DZANK1Q9NVP4 752 aa7.35□□□□□ -1.23
NEAT1-205ENST00000616315 CABP4P57796 275 aa7.34□□□□□ -1.23
NEAT1-205ENST00000616315 COL19A1Q14993 1142 aa7.34□□□□□ -1.23
NEAT1-205ENST00000616315 PDE12Q6L8Q7 609 aaKnown RBP7.34□□□□□ -1.23
NEAT1-205ENST00000616315 OGFOD2Q6N063 350 aa7.34□□□□□ -1.23
NEAT1-205ENST00000616315 ATCAYQ86WG3 371 aa7.34□□□□□ -1.23
NEAT1-205ENST00000616315 C1orf127Q8N9H9 656 aa7.34□□□□□ -1.23
NEAT1-205ENST00000616315 NUDT16Q96DE0 195 aaKnown RBP7.34□□□□□ -1.23
NEAT1-205ENST00000616315 ATG3Q9NT62 314 aa7.34□□□□□ -1.23
NEAT1-205ENST00000616315 CCDC39Q9UFE4 941 aa7.34□□□□□ -1.23
NEAT1-205ENST00000616315 SOX13Q9UN79 622 aa7.34□□□□□ -1.23
NEAT1-205ENST00000616315 LEMD3Q9Y2U8 911 aa7.34□□□□□ -1.23
NEAT1-205ENST00000616315 SOWAHDA6NJG2 315 aa7.33□□□□□ -1.24
NEAT1-205ENST00000616315 FAM177BA6PVY3 158 aa7.33□□□□□ -1.24
NEAT1-205ENST00000616315 GAS2O43903 313 aaKnown RBP7.33□□□□□ -1.24
NEAT1-205ENST00000616315 SERPINB4P48594 390 aa7.33□□□□□ -1.24
NEAT1-205ENST00000616315 JAG1P78504 1218 aa7.33□□□□□ -1.24
NEAT1-205ENST00000616315 CBLL1Q75N03 491 aa7.33□□□□□ -1.24
NEAT1-205ENST00000616315 PDE2AO00408 941 aaPredicted RBP7.32□□□□□ -1.24
NEAT1-205ENST00000616315 DLGAP3O95886 979 aa7.32□□□□□ -1.24
NEAT1-205ENST00000616315 FOSL1P15407 271 aa7.32□□□□□ -1.24
NEAT1-205ENST00000616315 C19orf57Q0VDD7 668 aa7.32□□□□□ -1.24
NEAT1-205ENST00000616315 ZNF438Q7Z4V0 828 aa7.32□□□□□ -1.24
NEAT1-205ENST00000616315 TMPRSS13Q9BYE2 586 aa7.32□□□□□ -1.24
NEAT1-205ENST00000616315 ANGEL1Q9UNK9 670 aaKnown RBP7.32□□□□□ -1.24
NEAT1-205ENST00000616315 SOX1O00570 391 aaPredicted RBP7.31□□□□□ -1.24
NEAT1-205ENST00000616315 TIAF1O95411 115 aa7.31□□□□□ -1.24
NEAT1-205ENST00000616315 PRNPP04156 253 aa7.31□□□□□ -1.24
NEAT1-205ENST00000616315 RXRBP28702 533 aa7.31□□□□□ -1.24
NEAT1-205ENST00000616315 ABTB2Q8N961 1025 aa7.31□□□□□ -1.24
NEAT1-205ENST00000616315 C12orf50Q8NA57 414 aaPredicted RBP7.31□□□□□ -1.24
NEAT1-205ENST00000616315 OSBPL1AQ9BXW6 950 aa7.31□□□□□ -1.24
NEAT1-205ENST00000616315 CES1P23141 567 aa7.3□□□□□ -1.24
NEAT1-205ENST00000616315 XKR5Q6UX68 686 aa7.3□□□□□ -1.24
NEAT1-205ENST00000616315 VN1R5Q7Z5H4 357 aa7.3□□□□□ -1.24
NEAT1-205ENST00000616315 SMG8Q8ND04 991 aaKnown RBP7.3□□□□□ -1.24
NEAT1-205ENST00000616315 CHRDQ9H2X0 955 aa7.3□□□□□ -1.24
NEAT1-205ENST00000616315 GGNBP2Q9H3C7 697 aa7.3□□□□□ -1.24
NEAT1-205ENST00000616315 EGFL7Q9UHF1 273 aa7.3□□□□□ -1.24
NEAT1-205ENST00000616315 AMOTL2Q9Y2J4 779 aa7.3□□□□□ -1.24
NEAT1-205ENST00000616315 LOC100289279A0A1B0GTE1 492 aa7.29□□□□□ -1.24
NEAT1-205ENST00000616315 A6NHS1 94 aa7.29□□□□□ -1.24
NEAT1-205ENST00000616315 DRD2P14416 443 aa7.29□□□□□ -1.24
NEAT1-205ENST00000616315 ADMP35318 185 aa7.29□□□□□ -1.24
NEAT1-205ENST00000616315 RBM25P49756 843 aaKnown RBP7.29□□□□□ -1.24
NEAT1-205ENST00000616315 NFKBIBQ15653 356 aa7.29□□□□□ -1.24
NEAT1-205ENST00000616315 NUTM2GQ5VZR2 741 aa7.29□□□□□ -1.24
NEAT1-205ENST00000616315 CDPF1Q6NVV7 123 aa7.29□□□□□ -1.24
NEAT1-205ENST00000616315 SUGCTQ9HAC7 445 aa7.29□□□□□ -1.24
NEAT1-205ENST00000616315 SEPT3Q9UH03 358 aa7.29□□□□□ -1.24
NEAT1-205ENST00000616315 FAM95CA0A1B0GW59 222 aa7.28□□□□□ -1.24
NEAT1-205ENST00000616315 ARL4DP49703 201 aa7.28□□□□□ -1.24
NEAT1-205ENST00000616315 TMEM102Q8N9M5 508 aaPredicted RBP7.28□□□□□ -1.24
NEAT1-205ENST00000616315 GIMAP7Q8NHV1 300 aa7.28□□□□□ -1.24
NEAT1-205ENST00000616315 FBLIM1Q8WUP2 373 aa7.28□□□□□ -1.24
NEAT1-205ENST00000616315 NXPE3Q969Y0 559 aa7.28□□□□□ -1.24
NEAT1-205ENST00000616315 USP26Q9BXU7 913 aa7.28□□□□□ -1.24
NEAT1-205ENST00000616315 H3BRB1 525 aa7.27□□□□□ -1.25
NEAT1-205ENST00000616315 ABL1P00519 1130 aa7.27□□□□□ -1.25
NEAT1-205ENST00000616315 C8AP07357 584 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms