RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CNNM1Q9NRU3 951 aa26.31■■□□□ 1.8
TRAPPC3-208ENST00000616074 PCDHAC2Q9Y5I4 1007 aa26.31■■□□□ 1.8
TRAPPC3-208ENST00000616074 ZNF521Q96K83 1311 aa26.31■■□□□ 1.8
TRAPPC3-208ENST00000616074 COL1A1P02452 1464 aaPredicted RBP26.3■■□□□ 1.8
TRAPPC3-208ENST00000616074 PRKG1Q13976 671 aa26.3■■□□□ 1.8
TRAPPC3-208ENST00000616074 DLGAP5Q15398 846 aa26.3■■□□□ 1.8
TRAPPC3-208ENST00000616074 JAG2Q9Y219 1238 aa26.3■■□□□ 1.8
TRAPPC3-208ENST00000616074 F8W031 263 aaPredicted RBP26.29■■□□□ 1.8
TRAPPC3-208ENST00000616074 MTMR14Q8NCE2 650 aa26.29■■□□□ 1.8
TRAPPC3-208ENST00000616074 SUCLG2Q96I99 432 aa26.29■■□□□ 1.8
TRAPPC3-208ENST00000616074 MLLT1Q03111 559 aaPredicted RBP26.28■■□□□ 1.8
TRAPPC3-208ENST00000616074 PTPN12Q05209 780 aaKnown RBP26.28■■□□□ 1.8
TRAPPC3-208ENST00000616074 MKRN3Q13064 507 aaKnown RBP26.28■■□□□ 1.8
TRAPPC3-208ENST00000616074 KAZALD1Q96I82 304 aa26.28■■□□□ 1.8
TRAPPC3-208ENST00000616074 FKBP1AP62942 108 aaKnown RBP26.27■■□□□ 1.8
TRAPPC3-208ENST00000616074 ARMC9Q7Z3E5 817 aa26.27■■□□□ 1.8
TRAPPC3-208ENST00000616074 DEFB129Q9H1M3 183 aa26.27■■□□□ 1.8
TRAPPC3-208ENST00000616074 FZD1Q9UP38 647 aa26.27■■□□□ 1.8
TRAPPC3-208ENST00000616074 ARAP2Q8WZ64 1704 aa26.26■■□□□ 1.79
TRAPPC3-208ENST00000616074 NBPF7P0C2Y1 421 aaPredicted RBP26.26■■□□□ 1.79
TRAPPC3-208ENST00000616074 CFAP100Q494V2 611 aa26.26■■□□□ 1.79
TRAPPC3-208ENST00000616074 SSC5DA1L4H1 1573 aa26.25■■□□□ 1.79
TRAPPC3-208ENST00000616074 PUS3Q9BZE2 481 aaKnown RBP26.25■■□□□ 1.79
TRAPPC3-208ENST00000616074 ANGEL1Q9UNK9 670 aaKnown RBP26.25■■□□□ 1.79
TRAPPC3-208ENST00000616074 UTYO14607 1347 aa26.24■■□□□ 1.79
TRAPPC3-208ENST00000616074 AOX1Q06278 1338 aa26.24■■□□□ 1.79
TRAPPC3-208ENST00000616074 SPDYE2BA6NHP3 402 aa26.24■■□□□ 1.79
TRAPPC3-208ENST00000616074 TBC1D8O95759 1140 aa26.24■■□□□ 1.79
TRAPPC3-208ENST00000616074 SPDYE6P0CI01 402 aa26.24■■□□□ 1.79
TRAPPC3-208ENST00000616074 TM4SF4P48230 202 aa26.24■■□□□ 1.79
TRAPPC3-208ENST00000616074 LDLRAD1Q5T700 205 aa26.24■■□□□ 1.79
TRAPPC3-208ENST00000616074 MRPL50Q8N5N7 158 aaKnown RBP26.24■■□□□ 1.79
TRAPPC3-208ENST00000616074 CLRN2A0PK11 232 aa26.23■■□□□ 1.79
TRAPPC3-208ENST00000616074 UBE4AQ14139 1066 aa26.23■■□□□ 1.79
TRAPPC3-208ENST00000616074 CTU1Q7Z7A3 348 aaKnown RBP26.23■■□□□ 1.79
TRAPPC3-208ENST00000616074 PRMT6Q96LA8 375 aaPredicted RBP26.23■■□□□ 1.79
TRAPPC3-208ENST00000616074 FAM205AQ6ZU69 1335 aa26.22■■□□□ 1.79
TRAPPC3-208ENST00000616074 MYO1BO43795 1136 aa26.22■■□□□ 1.79
TRAPPC3-208ENST00000616074 GYG1P46976 350 aa26.22■■□□□ 1.79
TRAPPC3-208ENST00000616074 TDRD7Q8NHU6 1098 aaKnown RBP26.22■■□□□ 1.79
TRAPPC3-208ENST00000616074 PPP2R3BQ9Y5P8 575 aa26.22■■□□□ 1.79
TRAPPC3-208ENST00000616074 BICC1Q9H694 974 aaKnown RBP26.21■■□□□ 1.79
TRAPPC3-208ENST00000616074 VEZTQ9HBM0 779 aa26.21■■□□□ 1.79
TRAPPC3-208ENST00000616074 TNRC18O15417 2968 aaPredicted RBP26.21■■□□□ 1.79
TRAPPC3-208ENST00000616074 HIBADHP31937 336 aaKnown RBP26.2■■□□□ 1.78
TRAPPC3-208ENST00000616074 RBM5P52756 815 aaKnown RBP eCLIP26.2■■□□□ 1.78
TRAPPC3-208ENST00000616074 SREBF2Q12772 1141 aa26.2■■□□□ 1.78
TRAPPC3-208ENST00000616074 MAP3K11Q16584 847 aa26.2■■□□□ 1.78
TRAPPC3-208ENST00000616074 RABL6Q3YEC7 729 aaPredicted RBP26.2■■□□□ 1.78
TRAPPC3-208ENST00000616074 SPRYD7Q5W111 196 aa26.2■■□□□ 1.78
TRAPPC3-208ENST00000616074 ZNF296Q8WUU4 475 aaPredicted RBP26.2■■□□□ 1.78
TRAPPC3-208ENST00000616074 FAM84BQ96KN1 310 aaPredicted RBP26.2■■□□□ 1.78
TRAPPC3-208ENST00000616074 RIPOR2Q9Y4F9 1068 aa26.2■■□□□ 1.78
TRAPPC3-208ENST00000616074 LAMB1P07942 1786 aa26.2■■□□□ 1.78
TRAPPC3-208ENST00000616074 MROH5Q6ZUA9 1318 aa26.19■■□□□ 1.78
TRAPPC3-208ENST00000616074 MFSD14BQ5SR56 506 aa26.19■■□□□ 1.78
TRAPPC3-208ENST00000616074 ANKRD44Q8N8A2 993 aa26.19■■□□□ 1.78
TRAPPC3-208ENST00000616074 PTPRCP08575 1304 aa26.17■■□□□ 1.78
TRAPPC3-208ENST00000616074 PPP1R12BO60237 982 aaPredicted RBP26.17■■□□□ 1.78
TRAPPC3-208ENST00000616074 LRRC24Q50LG9 513 aa26.17■■□□□ 1.78
TRAPPC3-208ENST00000616074 NBPF12Q5TAG4 269 aaPredicted RBP26.17■■□□□ 1.78
TRAPPC3-208ENST00000616074 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.17■■□□□ 1.78
TRAPPC3-208ENST00000616074 TTF2Q9UNY4 1162 aaKnown RBP26.17■■□□□ 1.78
TRAPPC3-208ENST00000616074 E9PSI1 815 aa26.16■■□□□ 1.78
TRAPPC3-208ENST00000616074 GPR25O00155 361 aa26.16■■□□□ 1.78
TRAPPC3-208ENST00000616074 SSH1Q8WYL5 1049 aa26.16■■□□□ 1.78
TRAPPC3-208ENST00000616074 CLMNQ96JQ2 1002 aa26.16■■□□□ 1.78
TRAPPC3-208ENST00000616074 OTOFQ9HC10 1997 aa26.16■■□□□ 1.78
TRAPPC3-208ENST00000616074 SOX10P56693 466 aa26.15■■□□□ 1.78
TRAPPC3-208ENST00000616074 RASA3Q14644 834 aa26.15■■□□□ 1.78
TRAPPC3-208ENST00000616074 SUPT20HL1Q3ZLR7 823 aa26.15■■□□□ 1.78
TRAPPC3-208ENST00000616074 NOM1Q5C9Z4 860 aaKnown RBP26.15■■□□□ 1.78
TRAPPC3-208ENST00000616074 SLC10A4Q96EP9 437 aa26.15■■□□□ 1.78
TRAPPC3-208ENST00000616074 CFHR5Q9BXR6 569 aa26.15■■□□□ 1.78
TRAPPC3-208ENST00000616074 SERPINA10Q9UK55 444 aa26.15■■□□□ 1.78
TRAPPC3-208ENST00000616074 SPDYE2Q495Y8 402 aa26.14■■□□□ 1.78
TRAPPC3-208ENST00000616074 WNK4Q96J92 1243 aa26.14■■□□□ 1.78
TRAPPC3-208ENST00000616074 R3HDMLQ9H3Y0 253 aa26.14■■□□□ 1.78
TRAPPC3-208ENST00000616074 ZNF70Q9UC06 446 aaPredicted RBP26.14■■□□□ 1.78
TRAPPC3-208ENST00000616074 METTL24Q5JXM2 366 aa26.13■■□□□ 1.77
TRAPPC3-208ENST00000616074 FBXO33Q7Z6M2 555 aa26.13■■□□□ 1.77
TRAPPC3-208ENST00000616074 VGLL2Q8N8G2 317 aa26.13■■□□□ 1.77
TRAPPC3-208ENST00000616074 KLHDC4Q8TBB5 520 aa26.13■■□□□ 1.77
TRAPPC3-208ENST00000616074 TDRD3Q9H7E2 651 aaKnown RBP26.13■■□□□ 1.77
TRAPPC3-208ENST00000616074 IQSEC3Q9UPP2 1182 aaPredicted RBP26.13■■□□□ 1.77
TRAPPC3-208ENST00000616074 HPS5Q9UPZ3 1129 aa26.13■■□□□ 1.77
TRAPPC3-208ENST00000616074 MANSC4A6NHS7 340 aaPredicted RBP26.12■■□□□ 1.77
TRAPPC3-208ENST00000616074 ZBTB48P10074 688 aaPredicted RBP26.12■■□□□ 1.77
TRAPPC3-208ENST00000616074 SLFN5Q08AF3 891 aa26.12■■□□□ 1.77
TRAPPC3-208ENST00000616074 GRIK5Q16478 980 aa26.12■■□□□ 1.77
TRAPPC3-208ENST00000616074 VPS37DQ86XT2 251 aa26.12■■□□□ 1.77
TRAPPC3-208ENST00000616074 USP44Q9H0E7 712 aa26.12■■□□□ 1.77
TRAPPC3-208ENST00000616074 UNCXA6NJT0 531 aa26.11■■□□□ 1.77
TRAPPC3-208ENST00000616074 USP2O75604 605 aaPredicted RBP26.11■■□□□ 1.77
TRAPPC3-208ENST00000616074 CRKP46108 304 aa26.11■■□□□ 1.77
TRAPPC3-208ENST00000616074 IREB2P48200 963 aaKnown RBP26.11■■□□□ 1.77
TRAPPC3-208ENST00000616074 TNFAIP1Q13829 316 aa26.11■■□□□ 1.77
TRAPPC3-208ENST00000616074 PKN2Q16513 984 aaKnown RBP26.11■■□□□ 1.77
TRAPPC3-208ENST00000616074 DZIP1LQ8IYY4 767 aaKnown RBP26.11■■□□□ 1.77
TRAPPC3-208ENST00000616074 PDE8BO95263 885 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 298 ms