RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ZNRF3Q9ULT6 936 aa14.03□□□□□ -0.16
SLIRP-212ENST00000613856 RIPOR2Q9Y4F9 1068 aa14.03□□□□□ -0.16
SLIRP-212ENST00000613856 AK9Q5TCS8 1911 aa14.02□□□□□ -0.16
SLIRP-212ENST00000613856 AKAP11Q9UKA4 1901 aa14.02□□□□□ -0.16
SLIRP-212ENST00000613856 MROH5Q6ZUA9 1318 aa14.02□□□□□ -0.17
SLIRP-212ENST00000613856 CA12O43570 354 aa14.02□□□□□ -0.17
SLIRP-212ENST00000613856 TFCP2Q12800 502 aa14.02□□□□□ -0.17
SLIRP-212ENST00000613856 LDHAL6AQ6ZMR3 332 aa14.02□□□□□ -0.17
SLIRP-212ENST00000613856 USP48Q86UV5 1035 aa14.02□□□□□ -0.17
SLIRP-212ENST00000613856 ANKRD18AQ8IVF6 992 aa14.02□□□□□ -0.17
SLIRP-212ENST00000613856 HHIPL1Q96JK4 782 aa14.02□□□□□ -0.17
SLIRP-212ENST00000613856 STAP2Q9UGK3 403 aa14.02□□□□□ -0.17
SLIRP-212ENST00000613856 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-212ENST00000613856 ATP6V0A2Q9Y487 856 aa14.02□□□□□ -0.17
SLIRP-212ENST00000613856 MX1P20591 662 aa14.01□□□□□ -0.17
SLIRP-212ENST00000613856 TNNI3KQ59H18 835 aa14.01□□□□□ -0.17
SLIRP-212ENST00000613856 DDX46Q7L014 1031 aaKnown RBP14.01□□□□□ -0.17
SLIRP-212ENST00000613856 VGLL2Q8N8G2 317 aa14.01□□□□□ -0.17
SLIRP-212ENST00000613856 OTUD7AQ8TE49 926 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-212ENST00000613856 MPHOSPH8Q99549 860 aa14.01□□□□□ -0.17
SLIRP-212ENST00000613856 CNNM1Q9NRU3 951 aa14.01□□□□□ -0.17
SLIRP-212ENST00000613856 CEP126Q9P2H0 1117 aa14.01□□□□□ -0.17
SLIRP-212ENST00000613856 FPGT-TNNI3KV9GXZ4 949 aa14.01□□□□□ -0.17
SLIRP-212ENST00000613856 TTC41PQ6P2S7 1318 aa14□□□□□ -0.17
SLIRP-212ENST00000613856 PDE1AP54750 535 aa14□□□□□ -0.17
SLIRP-212ENST00000613856 HUNKP57058 714 aa14□□□□□ -0.17
SLIRP-212ENST00000613856 GRAPQ13588 217 aa14□□□□□ -0.17
SLIRP-212ENST00000613856 SAMD7Q7Z3H4 446 aa14□□□□□ -0.17
SLIRP-212ENST00000613856 AACSQ86V21 672 aa14□□□□□ -0.17
SLIRP-212ENST00000613856 GRAPLQ8TC17 118 aaPredicted RBP14□□□□□ -0.17
SLIRP-212ENST00000613856 EAF2Q96CJ1 260 aaPredicted RBP14□□□□□ -0.17
SLIRP-212ENST00000613856 RTFDC1Q9BY42 306 aaPredicted RBP14□□□□□ -0.17
SLIRP-212ENST00000613856 BSDC1Q9NW68 430 aaPredicted RBP14□□□□□ -0.17
SLIRP-212ENST00000613856 CNOT7Q9UIV1 285 aaKnown RBP14□□□□□ -0.17
SLIRP-212ENST00000613856 AKAP2Q9Y2D5 859 aa14□□□□□ -0.17
SLIRP-212ENST00000613856 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14□□□□□ -0.17
SLIRP-212ENST00000613856 SCN9AQ15858 1988 aa14□□□□□ -0.17
SLIRP-212ENST00000613856 ADM5C9JUS6 153 aa13.99□□□□□ -0.17
SLIRP-212ENST00000613856 IFIT2P09913 472 aaKnown RBP13.99□□□□□ -0.17
SLIRP-212ENST00000613856 BMP2KLQ5H9B9 411 aa13.99□□□□□ -0.17
SLIRP-212ENST00000613856 METTL24Q5JXM2 366 aa13.99□□□□□ -0.17
SLIRP-212ENST00000613856 TTC22Q5TAA0 569 aa13.99□□□□□ -0.17
SLIRP-212ENST00000613856 MICALL2Q8IY33 904 aa13.99□□□□□ -0.17
SLIRP-212ENST00000613856 CELF1Q92879 486 aaKnown RBP13.99□□□□□ -0.17
SLIRP-212ENST00000613856 GPATCH3Q96I76 525 aa13.99□□□□□ -0.17
SLIRP-212ENST00000613856 ASTN2O75129 1339 aaPredicted RBP13.98□□□□□ -0.17
SLIRP-212ENST00000613856 PDE8BO95263 885 aa13.98□□□□□ -0.17
SLIRP-212ENST00000613856 RPS8P62241 208 aaKnown RBP13.98□□□□□ -0.17
SLIRP-212ENST00000613856 KIF23Q02241 960 aaPredicted RBP13.98□□□□□ -0.17
SLIRP-212ENST00000613856 KIAA2012Q0VF49 1180 aa13.98□□□□□ -0.17
SLIRP-212ENST00000613856 NOGQ13253 232 aa13.98□□□□□ -0.17
SLIRP-212ENST00000613856 CDC37L1Q7L3B6 337 aa13.98□□□□□ -0.17
SLIRP-212ENST00000613856 KCNQ5Q9NR82 932 aa13.98□□□□□ -0.17
SLIRP-212ENST00000613856 TRPA1O75762 1119 aa13.97□□□□□ -0.17
SLIRP-212ENST00000613856 PUM3Q15397 648 aaKnown RBP13.97□□□□□ -0.17
SLIRP-212ENST00000613856 TBC1D10BQ4KMP7 808 aaPredicted RBP13.97□□□□□ -0.17
SLIRP-212ENST00000613856 DPP8Q6V1X1 898 aaPredicted RBP13.97□□□□□ -0.17
SLIRP-212ENST00000613856 TMC4Q7Z404 712 aa13.97□□□□□ -0.17
SLIRP-212ENST00000613856 ECHDC1Q9NTX5 307 aa13.97□□□□□ -0.17
SLIRP-212ENST00000613856 RNF186Q9NXI6 227 aa13.97□□□□□ -0.17
SLIRP-212ENST00000613856 DBNLQ9UJU6 430 aaKnown RBP13.97□□□□□ -0.17
SLIRP-212ENST00000613856 A0A1B0GUL7 405 aa13.96□□□□□ -0.17
SLIRP-212ENST00000613856 ERC2O15083 957 aa13.96□□□□□ -0.17
SLIRP-212ENST00000613856 GSPT1P15170 499 aaKnown RBP13.96□□□□□ -0.17
SLIRP-212ENST00000613856 FGFR2P21802 821 aa13.96□□□□□ -0.17
SLIRP-212ENST00000613856 CHRNDQ07001 517 aa13.96□□□□□ -0.17
SLIRP-212ENST00000613856 ATP2B3Q16720 1220 aa13.96□□□□□ -0.17
SLIRP-212ENST00000613856 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
SLIRP-212ENST00000613856 RGMBQ6NW40 437 aa13.96□□□□□ -0.17
SLIRP-212ENST00000613856 MPNDQ8N594 471 aa13.96□□□□□ -0.17
SLIRP-212ENST00000613856 PI4K2BQ8TCG2 481 aa13.96□□□□□ -0.17
SLIRP-212ENST00000613856 ZC3H15Q8WU90 426 aaKnown RBP13.96□□□□□ -0.17
SLIRP-212ENST00000613856 CCDC8Q9H0W5 538 aaPredicted RBP13.96□□□□□ -0.17
SLIRP-212ENST00000613856 TLR7Q9NYK1 1049 aaKnown RBP13.96□□□□□ -0.17
SLIRP-212ENST00000613856 MKI67P46013 3256 aaKnown RBP13.95□□□□□ -0.18
SLIRP-212ENST00000613856 PSMD14O00487 310 aa13.95□□□□□ -0.18
SLIRP-212ENST00000613856 BBOX1O75936 387 aa13.95□□□□□ -0.18
SLIRP-212ENST00000613856 GLRX3O76003 335 aaKnown RBP13.95□□□□□ -0.18
SLIRP-212ENST00000613856 DBNDD2Q9BQY9 259 aa13.95□□□□□ -0.18
SLIRP-212ENST00000613856 ANKRD2Q9GZV1 360 aa13.95□□□□□ -0.18
SLIRP-212ENST00000613856 DBNDD1Q9H9R9 158 aa13.95□□□□□ -0.18
SLIRP-212ENST00000613856 GBA2Q9HCG7 927 aaPredicted RBP13.95□□□□□ -0.18
SLIRP-212ENST00000613856 MINPP1Q9UNW1 487 aa13.95□□□□□ -0.18
SLIRP-212ENST00000613856 MYH13Q9UKX3 1938 aa13.94□□□□□ -0.18
SLIRP-212ENST00000613856 RBM26Q5T8P6 1007 aaKnown RBP13.94□□□□□ -0.18
SLIRP-212ENST00000613856 KRT26Q7Z3Y9 468 aa13.94□□□□□ -0.18
SLIRP-212ENST00000613856 SP8Q8IXZ3 490 aa13.94□□□□□ -0.18
SLIRP-212ENST00000613856 LPIN2Q92539 896 aa13.94□□□□□ -0.18
SLIRP-212ENST00000613856 CSRNP1Q96S65 589 aa13.94□□□□□ -0.18
SLIRP-212ENST00000613856 BCL11AQ9H165 835 aa13.94□□□□□ -0.18
SLIRP-212ENST00000613856 VPS33BQ9H267 617 aa13.94□□□□□ -0.18
SLIRP-212ENST00000613856 SLC5A1P13866 664 aa13.93□□□□□ -0.18
SLIRP-212ENST00000613856 ATP5JP18859 108 aa13.93□□□□□ -0.18
SLIRP-212ENST00000613856 ZNF157P51786 506 aaPredicted RBP13.93□□□□□ -0.18
SLIRP-212ENST00000613856 UBE4AQ14139 1066 aa13.93□□□□□ -0.18
SLIRP-212ENST00000613856 TNIP1Q15025 636 aa13.93□□□□□ -0.18
SLIRP-212ENST00000613856 TSHZ3Q63HK5 1081 aa13.93□□□□□ -0.18
SLIRP-212ENST00000613856 SUPT20HQ8NEM7 779 aa13.93□□□□□ -0.18
SLIRP-212ENST00000613856 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.93□□□□□ -0.18
SLIRP-212ENST00000613856 XAGE2Q96GT9 111 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms