RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 GPRC5DQ9NZD1 345 aa16.28■□□□□ 0.2
MDC1-209ENST00000613547 ZBTB12Q9Y330 459 aaPredicted RBP16.28■□□□□ 0.2
MDC1-209ENST00000613547 H7C1D1 291 aa16.27■□□□□ 0.2
MDC1-209ENST00000613547 UQCRFS1P1P0C7P4 283 aa16.27■□□□□ 0.2
MDC1-209ENST00000613547 PHKA1P46020 1223 aa16.27■□□□□ 0.2
MDC1-209ENST00000613547 SCNN1DP51172 638 aa16.27■□□□□ 0.2
MDC1-209ENST00000613547 FKBP1AP62942 108 aaKnown RBP16.27■□□□□ 0.2
MDC1-209ENST00000613547 CHAF1AQ13111 956 aaPredicted RBP16.27■□□□□ 0.2
MDC1-209ENST00000613547 TTC39AQ5SRH9 613 aa16.27■□□□□ 0.2
MDC1-209ENST00000613547 OGFOD1Q8N543 542 aa16.27■□□□□ 0.2
MDC1-209ENST00000613547 WDR66Q8TBY9 1149 aa16.27■□□□□ 0.2
MDC1-209ENST00000613547 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.2
MDC1-209ENST00000613547 DBNDD2Q9BQY9 259 aa16.27■□□□□ 0.2
MDC1-209ENST00000613547 BCL11AQ9H165 835 aa16.27■□□□□ 0.2
MDC1-209ENST00000613547 DENND2AQ9ULE3 1009 aa16.27■□□□□ 0.2
MDC1-209ENST00000613547 WDR90Q96KV7 1748 aa16.26■□□□□ 0.19
MDC1-209ENST00000613547 ZBTB22O15209 634 aa16.26■□□□□ 0.19
MDC1-209ENST00000613547 USP17L8P0C7I0 530 aa16.26■□□□□ 0.19
MDC1-209ENST00000613547 EPHX2P34913 555 aa16.26■□□□□ 0.19
MDC1-209ENST00000613547 MMP14P50281 582 aa16.26■□□□□ 0.19
MDC1-209ENST00000613547 MFSD14BQ5SR56 506 aa16.26■□□□□ 0.19
MDC1-209ENST00000613547 PNMA8AQ86V59 439 aaPredicted RBP16.26■□□□□ 0.19
MDC1-209ENST00000613547 CCDC8Q9H0W5 538 aaPredicted RBP16.26■□□□□ 0.19
MDC1-209ENST00000613547 CNOT7Q9UIV1 285 aaKnown RBP16.26■□□□□ 0.19
MDC1-209ENST00000613547 EPS15P42566 896 aa16.25■□□□□ 0.19
MDC1-209ENST00000613547 MICALL2Q8IY33 904 aa16.25■□□□□ 0.19
MDC1-209ENST00000613547 TAF1DQ9H5J8 278 aaPredicted RBP16.25■□□□□ 0.19
MDC1-209ENST00000613547 ADARB2Q9NS39 739 aaKnown RBP16.25■□□□□ 0.19
MDC1-209ENST00000613547 DBNLQ9UJU6 430 aaKnown RBP16.25■□□□□ 0.19
MDC1-209ENST00000613547 HDAC9Q9UKV0 1011 aa16.25■□□□□ 0.19
MDC1-209ENST00000613547 JAG2Q9Y219 1238 aa16.25■□□□□ 0.19
MDC1-209ENST00000613547 PDS5AQ29RF7 1337 aaKnown RBP16.24■□□□□ 0.19
MDC1-209ENST00000613547 POTECB2RU33 542 aa16.24■□□□□ 0.19
MDC1-209ENST00000613547 ARID4AP29374 1257 aaPredicted RBP16.24■□□□□ 0.19
MDC1-209ENST00000613547 RASGRF1Q13972 1273 aa16.24■□□□□ 0.19
MDC1-209ENST00000613547 KIAA0825Q8IV33 1275 aa16.24■□□□□ 0.19
MDC1-209ENST00000613547 ZNF512BQ96KM6 892 aaPredicted RBP16.24■□□□□ 0.19
MDC1-209ENST00000613547 GMLQ99445 158 aa16.24■□□□□ 0.19
MDC1-209ENST00000613547 MXD3Q9BW11 206 aa16.24■□□□□ 0.19
MDC1-209ENST00000613547 TLR7Q9NYK1 1049 aaKnown RBP16.24■□□□□ 0.19
MDC1-209ENST00000613547 ARAP2Q8WZ64 1704 aa16.23■□□□□ 0.19
MDC1-209ENST00000613547 EAPPQ56P03 285 aaPredicted RBP16.23■□□□□ 0.19
MDC1-209ENST00000613547 USP50Q70EL3 339 aaPredicted RBP16.23■□□□□ 0.19
MDC1-209ENST00000613547 ZGPATQ8N5A5 531 aaKnown RBP16.23■□□□□ 0.19
MDC1-209ENST00000613547 CERS5Q8N5B7 392 aa16.23■□□□□ 0.19
MDC1-209ENST00000613547 SPATA5Q8NB90 893 aa16.23■□□□□ 0.19
MDC1-209ENST00000613547 SUGT1Q9Y2Z0 365 aa16.23■□□□□ 0.19
MDC1-209ENST00000613547 KIF3CO14782 793 aa16.22■□□□□ 0.19
MDC1-209ENST00000613547 SMARCA5O60264 1052 aaPredicted RBP16.22■□□□□ 0.19
MDC1-209ENST00000613547 ZNF280AP59817 542 aaPredicted RBP16.22■□□□□ 0.19
MDC1-209ENST00000613547 ANKRD45Q5TZF3 282 aa16.22■□□□□ 0.19
MDC1-209ENST00000613547 GPATCH3Q96I76 525 aa16.22■□□□□ 0.19
MDC1-209ENST00000613547 SCN9AQ15858 1988 aa16.22■□□□□ 0.19
MDC1-209ENST00000613547 MAST3O60307 1309 aa16.21■□□□□ 0.19
MDC1-209ENST00000613547 SALL1Q9NSC2 1324 aa16.21■□□□□ 0.19
MDC1-209ENST00000613547 F8W031 263 aaPredicted RBP16.21■□□□□ 0.19
MDC1-209ENST00000613547 IGHDP01880 384 aa16.21■□□□□ 0.19
MDC1-209ENST00000613547 SPTY2D1Q68D10 685 aaPredicted RBP16.21■□□□□ 0.19
MDC1-209ENST00000613547 SMC5Q8IY18 1101 aa16.21■□□□□ 0.19
MDC1-209ENST00000613547 HMG20BQ9P0W2 317 aa16.21■□□□□ 0.19
MDC1-209ENST00000613547 SCN4AP35499 1836 aa16.2■□□□□ 0.18
MDC1-209ENST00000613547 TOMM70O94826 608 aa16.2■□□□□ 0.18
MDC1-209ENST00000613547 KIF4BQ2VIQ3 1234 aa16.2■□□□□ 0.18
MDC1-209ENST00000613547 TBC1D10BQ4KMP7 808 aaPredicted RBP16.2■□□□□ 0.18
MDC1-209ENST00000613547 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
MDC1-209ENST00000613547 LDHDQ86WU2 507 aa16.2■□□□□ 0.18
MDC1-209ENST00000613547 MYOZ2Q9NPC6 264 aa16.2■□□□□ 0.18
MDC1-209ENST00000613547 TTF2Q9UNY4 1162 aaKnown RBP16.2■□□□□ 0.18
MDC1-209ENST00000613547 CLEC11AQ9Y240 323 aa16.2■□□□□ 0.18
MDC1-209ENST00000613547 COL1A1P02452 1464 aaPredicted RBP16.2■□□□□ 0.18
MDC1-209ENST00000613547 SHTN1A0MZ66 631 aa16.19■□□□□ 0.18
MDC1-209ENST00000613547 LDHBP07195 334 aaKnown RBP16.19■□□□□ 0.18
MDC1-209ENST00000613547 MCAMP43121 646 aa16.19■□□□□ 0.18
MDC1-209ENST00000613547 SAMD7Q7Z3H4 446 aa16.19■□□□□ 0.18
MDC1-209ENST00000613547 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
MDC1-209ENST00000613547 PSME4Q14997 1843 aa16.19■□□□□ 0.18
MDC1-209ENST00000613547 RBM5P52756 815 aaKnown RBP eCLIP16.18■□□□□ 0.18
MDC1-209ENST00000613547 HDLBPQ00341 1268 aaKnown RBP16.18■□□□□ 0.18
MDC1-209ENST00000613547 SCARF1Q14162 830 aa16.18■□□□□ 0.18
MDC1-209ENST00000613547 DLGAP5Q15398 846 aa16.18■□□□□ 0.18
MDC1-209ENST00000613547 SMC1BQ8NDV3 1235 aa16.18■□□□□ 0.18
MDC1-209ENST00000613547 RBM46Q8TBY0 533 aaKnown RBP16.18■□□□□ 0.18
MDC1-209ENST00000613547 TRPM4Q8TD43 1214 aa16.18■□□□□ 0.18
MDC1-209ENST00000613547 ZC3H15Q8WU90 426 aaKnown RBP16.18■□□□□ 0.18
MDC1-209ENST00000613547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.18■□□□□ 0.18
MDC1-209ENST00000613547 SNRKQ9NRH2 765 aa16.18■□□□□ 0.18
MDC1-209ENST00000613547 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
MDC1-209ENST00000613547 SERPINA10Q9UK55 444 aa16.18■□□□□ 0.18
MDC1-209ENST00000613547 PRDX5P30044 214 aa16.17■□□□□ 0.18
MDC1-209ENST00000613547 B4GALNT3Q6L9W6 998 aa16.17■□□□□ 0.18
MDC1-209ENST00000613547 PI16Q6UXB8 463 aa16.17■□□□□ 0.18
MDC1-209ENST00000613547 DZIP1Q86YF9 867 aaKnown RBP16.17■□□□□ 0.18
MDC1-209ENST00000613547 SLF2Q8IX21 1173 aa16.17■□□□□ 0.18
MDC1-209ENST00000613547 TEKT1Q969V4 418 aa16.17■□□□□ 0.18
MDC1-209ENST00000613547 LRP2BPQ9P2M1 347 aa16.17■□□□□ 0.18
MDC1-209ENST00000613547 ERC2O15083 957 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 MYO1BO43795 1136 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 IGSF3O75054 1194 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 ATP5JP18859 108 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 ZAP70P43403 619 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms