RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 MTMR14Q8NCE2 650 aa22.49■■□□□ 1.19
SSBP1-215ENST00000612337 FKBP1AP62942 108 aaKnown RBP22.48■■□□□ 1.19
SSBP1-215ENST00000612337 DLGAP5Q15398 846 aa22.48■■□□□ 1.19
SSBP1-215ENST00000612337 PLIN1O60240 522 aa22.47■■□□□ 1.19
SSBP1-215ENST00000612337 COL1A1P02452 1464 aaPredicted RBP22.47■■□□□ 1.19
SSBP1-215ENST00000612337 SUCLG2Q96I99 432 aa22.46■■□□□ 1.19
SSBP1-215ENST00000612337 RGS19P49795 217 aa22.45■■□□□ 1.18
SSBP1-215ENST00000612337 ARMC9Q7Z3E5 817 aa22.45■■□□□ 1.18
SSBP1-215ENST00000612337 KAZALD1Q96I82 304 aa22.45■■□□□ 1.18
SSBP1-215ENST00000612337 UTYO14607 1347 aa22.45■■□□□ 1.18
SSBP1-215ENST00000612337 ECM29Q5VYK3 1845 aa22.45■■□□□ 1.18
SSBP1-215ENST00000612337 NBPF7P0C2Y1 421 aaPredicted RBP22.44■■□□□ 1.18
SSBP1-215ENST00000612337 UBE4AQ14139 1066 aa22.44■■□□□ 1.18
SSBP1-215ENST00000612337 MRPL50Q8N5N7 158 aaKnown RBP22.44■■□□□ 1.18
SSBP1-215ENST00000612337 DEFB129Q9H1M3 183 aa22.44■■□□□ 1.18
SSBP1-215ENST00000612337 F8W031 263 aaPredicted RBP22.43■■□□□ 1.18
SSBP1-215ENST00000612337 PTPN12Q05209 780 aaKnown RBP22.43■■□□□ 1.18
SSBP1-215ENST00000612337 CFAP100Q494V2 611 aa22.43■■□□□ 1.18
SSBP1-215ENST00000612337 PPP2R3BQ9Y5P8 575 aa22.43■■□□□ 1.18
SSBP1-215ENST00000612337 FAM205AQ6ZU69 1335 aa22.42■■□□□ 1.18
SSBP1-215ENST00000612337 SPDYE2BA6NHP3 402 aa22.42■■□□□ 1.18
SSBP1-215ENST00000612337 E9PSI1 815 aa22.42■■□□□ 1.18
SSBP1-215ENST00000612337 MYO1BO43795 1136 aa22.42■■□□□ 1.18
SSBP1-215ENST00000612337 SPDYE6P0CI01 402 aa22.42■■□□□ 1.18
SSBP1-215ENST00000612337 TM4SF4P48230 202 aa22.42■■□□□ 1.18
SSBP1-215ENST00000612337 PRKG1Q13976 671 aa22.42■■□□□ 1.18
SSBP1-215ENST00000612337 LDLRAD1Q5T700 205 aa22.42■■□□□ 1.18
SSBP1-215ENST00000612337 PUS3Q9BZE2 481 aaKnown RBP22.42■■□□□ 1.18
SSBP1-215ENST00000612337 JAG2Q9Y219 1238 aa22.42■■□□□ 1.18
SSBP1-215ENST00000612337 PCDHAC2Q9Y5I4 1007 aa22.42■■□□□ 1.18
SSBP1-215ENST00000612337 PTPRCP08575 1304 aa22.41■■□□□ 1.18
SSBP1-215ENST00000612337 RABL6Q3YEC7 729 aaPredicted RBP22.41■■□□□ 1.18
SSBP1-215ENST00000612337 TDRD7Q8NHU6 1098 aaKnown RBP22.41■■□□□ 1.18
SSBP1-215ENST00000612337 PRMT6Q96LA8 375 aaPredicted RBP22.41■■□□□ 1.18
SSBP1-215ENST00000612337 BICC1Q9H694 974 aaKnown RBP22.41■■□□□ 1.18
SSBP1-215ENST00000612337 ANGEL1Q9UNK9 670 aaKnown RBP22.41■■□□□ 1.18
SSBP1-215ENST00000612337 RIPOR2Q9Y4F9 1068 aa22.41■■□□□ 1.18
SSBP1-215ENST00000612337 MROH5Q6ZUA9 1318 aa22.4■■□□□ 1.18
SSBP1-215ENST00000612337 HIBADHP31937 336 aaKnown RBP22.4■■□□□ 1.18
SSBP1-215ENST00000612337 MLLT1Q03111 559 aaPredicted RBP22.4■■□□□ 1.18
SSBP1-215ENST00000612337 FAM84BQ96KN1 310 aaPredicted RBP22.4■■□□□ 1.18
SSBP1-215ENST00000612337 CLRN2A0PK11 232 aa22.39■■□□□ 1.17
SSBP1-215ENST00000612337 GYG1P46976 350 aa22.39■■□□□ 1.17
SSBP1-215ENST00000612337 SREBF2Q12772 1141 aa22.39■■□□□ 1.17
SSBP1-215ENST00000612337 MKRN3Q13064 507 aaKnown RBP22.39■■□□□ 1.17
SSBP1-215ENST00000612337 MAP3K11Q16584 847 aa22.39■■□□□ 1.17
SSBP1-215ENST00000612337 CTU1Q7Z7A3 348 aaKnown RBP22.39■■□□□ 1.17
SSBP1-215ENST00000612337 SSC5DA1L4H1 1573 aa22.38■■□□□ 1.17
SSBP1-215ENST00000612337 PPP1R12BO60237 982 aaPredicted RBP22.38■■□□□ 1.17
SSBP1-215ENST00000612337 MFSD14BQ5SR56 506 aa22.38■■□□□ 1.17
SSBP1-215ENST00000612337 ANKRD44Q8N8A2 993 aa22.38■■□□□ 1.17
SSBP1-215ENST00000612337 SSH1Q8WYL5 1049 aa22.38■■□□□ 1.17
SSBP1-215ENST00000612337 AOX1Q06278 1338 aa22.37■■□□□ 1.17
SSBP1-215ENST00000612337 TBC1D8O95759 1140 aa22.37■■□□□ 1.17
SSBP1-215ENST00000612337 RBM5P52756 815 aaKnown RBP eCLIP22.37■■□□□ 1.17
SSBP1-215ENST00000612337 SPRYD7Q5W111 196 aa22.37■■□□□ 1.17
SSBP1-215ENST00000612337 VEZTQ9HBM0 779 aa22.37■■□□□ 1.17
SSBP1-215ENST00000612337 FZD1Q9UP38 647 aa22.37■■□□□ 1.17
SSBP1-215ENST00000612337 SLFN5Q08AF3 891 aa22.36■■□□□ 1.17
SSBP1-215ENST00000612337 SUPT20HL1Q3ZLR7 823 aa22.36■■□□□ 1.17
SSBP1-215ENST00000612337 NOM1Q5C9Z4 860 aaKnown RBP22.36■■□□□ 1.17
SSBP1-215ENST00000612337 SERPINA10Q9UK55 444 aa22.36■■□□□ 1.17
SSBP1-215ENST00000612337 TTF2Q9UNY4 1162 aaKnown RBP22.36■■□□□ 1.17
SSBP1-215ENST00000612337 ARAP2Q8WZ64 1704 aa22.36■■□□□ 1.17
SSBP1-215ENST00000612337 UNCXA6NJT0 531 aa22.35■■□□□ 1.17
SSBP1-215ENST00000612337 LRRC24Q50LG9 513 aa22.35■■□□□ 1.17
SSBP1-215ENST00000612337 FBXO33Q7Z6M2 555 aa22.35■■□□□ 1.17
SSBP1-215ENST00000612337 ZNF296Q8WUU4 475 aaPredicted RBP22.35■■□□□ 1.17
SSBP1-215ENST00000612337 CFHR5Q9BXR6 569 aa22.35■■□□□ 1.17
SSBP1-215ENST00000612337 TNRC18O15417 2968 aaPredicted RBP22.34■■□□□ 1.17
SSBP1-215ENST00000612337 SPDYE2Q495Y8 402 aa22.34■■□□□ 1.17
SSBP1-215ENST00000612337 METTL24Q5JXM2 366 aa22.34■■□□□ 1.17
SSBP1-215ENST00000612337 NBPF12Q5TAG4 269 aaPredicted RBP22.34■■□□□ 1.17
SSBP1-215ENST00000612337 VPS37DQ86XT2 251 aa22.34■■□□□ 1.17
SSBP1-215ENST00000612337 SLC10A4Q96EP9 437 aa22.34■■□□□ 1.17
SSBP1-215ENST00000612337 USP44Q9H0E7 712 aa22.34■■□□□ 1.17
SSBP1-215ENST00000612337 GPR25O00155 361 aa22.33■■□□□ 1.17
SSBP1-215ENST00000612337 ZBTB48P10074 688 aaPredicted RBP22.33■■□□□ 1.17
SSBP1-215ENST00000612337 TNFAIP1Q13829 316 aa22.33■■□□□ 1.17
SSBP1-215ENST00000612337 RASA3Q14644 834 aa22.33■■□□□ 1.17
SSBP1-215ENST00000612337 ALDH1L2Q3SY69 923 aa22.33■■□□□ 1.17
SSBP1-215ENST00000612337 VGLL2Q8N8G2 317 aa22.33■■□□□ 1.17
SSBP1-215ENST00000612337 PDE8BO95263 885 aa22.32■■□□□ 1.16
SSBP1-215ENST00000612337 INHBEP58166 350 aa22.32■■□□□ 1.16
SSBP1-215ENST00000612337 PKN2Q16513 984 aaKnown RBP22.32■■□□□ 1.16
SSBP1-215ENST00000612337 WNK4Q96J92 1243 aa22.32■■□□□ 1.16
SSBP1-215ENST00000612337 CLMNQ96JQ2 1002 aa22.32■■□□□ 1.16
SSBP1-215ENST00000612337 ZNF70Q9UC06 446 aaPredicted RBP22.32■■□□□ 1.16
SSBP1-215ENST00000612337 MANSC4A6NHS7 340 aaPredicted RBP22.31■■□□□ 1.16
SSBP1-215ENST00000612337 ALDH1A1P00352 501 aa22.31■■□□□ 1.16
SSBP1-215ENST00000612337 CRKP46108 304 aa22.31■■□□□ 1.16
SSBP1-215ENST00000612337 IREB2P48200 963 aaKnown RBP22.31■■□□□ 1.16
SSBP1-215ENST00000612337 CAVIN4Q5BKX8 364 aa22.31■■□□□ 1.16
SSBP1-215ENST00000612337 DZIP1LQ8IYY4 767 aaKnown RBP22.31■■□□□ 1.16
SSBP1-215ENST00000612337 LAMB1P07942 1786 aa22.3■■□□□ 1.16
SSBP1-215ENST00000612337 USP2O75604 605 aaPredicted RBP22.3■■□□□ 1.16
SSBP1-215ENST00000612337 KLHDC4Q8TBB5 520 aa22.3■■□□□ 1.16
SSBP1-215ENST00000612337 TBC1D22AQ8WUA7 517 aa22.3■■□□□ 1.16
SSBP1-215ENST00000612337 TDRD3Q9H7E2 651 aaKnown RBP22.3■■□□□ 1.16
SSBP1-215ENST00000612337 IQSEC3Q9UPP2 1182 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms