RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 GMPSP49915 693 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-217ENST00000611848 TFCP2Q12800 502 aa10.84□□□□□ -0.67
SMAD4-217ENST00000611848 TTLL5Q6EMB2 1281 aa10.84□□□□□ -0.67
SMAD4-217ENST00000611848 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-217ENST00000611848 ERC1Q8IUD2 1116 aa10.84□□□□□ -0.67
SMAD4-217ENST00000611848 SIRT2Q8IXJ6 389 aa10.84□□□□□ -0.67
SMAD4-217ENST00000611848 TDRD7Q8NHU6 1098 aaKnown RBP10.84□□□□□ -0.67
SMAD4-217ENST00000611848 ZNF609O15014 1411 aa10.84□□□□□ -0.67
SMAD4-217ENST00000611848 SASH1O94885 1247 aa10.84□□□□□ -0.67
SMAD4-217ENST00000611848 EPHX2P34913 555 aa10.84□□□□□ -0.67
SMAD4-217ENST00000611848 PNMA8AQ86V59 439 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-217ENST00000611848 TAF1DQ9H5J8 278 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-217ENST00000611848 GPR108Q9NPR9 543 aa10.84□□□□□ -0.67
SMAD4-217ENST00000611848 GPRC5DQ9NZD1 345 aa10.84□□□□□ -0.67
SMAD4-217ENST00000611848 ZBTB47Q9UFB7 747 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-217ENST00000611848 CNOT7Q9UIV1 285 aaKnown RBP10.84□□□□□ -0.67
SMAD4-217ENST00000611848 ZBTB12Q9Y330 459 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-217ENST00000611848 MYO3BQ8WXR4 1341 aa10.83□□□□□ -0.68
SMAD4-217ENST00000611848 A0A1B0GUL7 405 aa10.83□□□□□ -0.68
SMAD4-217ENST00000611848 H7C1D1 291 aa10.83□□□□□ -0.68
SMAD4-217ENST00000611848 TOMM70O94826 608 aa10.83□□□□□ -0.68
SMAD4-217ENST00000611848 MMP14P50281 582 aa10.83□□□□□ -0.68
SMAD4-217ENST00000611848 BCAMP50895 628 aa10.83□□□□□ -0.68
SMAD4-217ENST00000611848 TIMM10P62072 90 aa10.83□□□□□ -0.68
SMAD4-217ENST00000611848 FKBP1AP62942 108 aaKnown RBP10.83□□□□□ -0.68
SMAD4-217ENST00000611848 GTF2IP78347 998 aa10.83□□□□□ -0.68
SMAD4-217ENST00000611848 DACT2Q5SW24 774 aa10.83□□□□□ -0.68
SMAD4-217ENST00000611848 FBXW7Q969H0 707 aa10.83□□□□□ -0.68
SMAD4-217ENST00000611848 GNL3LQ9NVN8 582 aaKnown RBP10.83□□□□□ -0.68
SMAD4-217ENST00000611848 MYH13Q9UKX3 1938 aa10.82□□□□□ -0.68
SMAD4-217ENST00000611848 ARAP2Q8WZ64 1704 aa10.82□□□□□ -0.68
SMAD4-217ENST00000611848 ZNF646O15015 1829 aaPredicted RBP10.82□□□□□ -0.68
SMAD4-217ENST00000611848 RAB11FIP3O75154 756 aa10.82□□□□□ -0.68
SMAD4-217ENST00000611848 FRAT2O75474 233 aaPredicted RBP10.82□□□□□ -0.68
SMAD4-217ENST00000611848 EPS15P42566 896 aa10.82□□□□□ -0.68
SMAD4-217ENST00000611848 USP50Q70EL3 339 aaPredicted RBP10.82□□□□□ -0.68
SMAD4-217ENST00000611848 RBM46Q8TBY0 533 aaKnown RBP10.82□□□□□ -0.68
SMAD4-217ENST00000611848 GMLQ99445 158 aa10.82□□□□□ -0.68
SMAD4-217ENST00000611848 ADARB2Q9NS39 739 aaKnown RBP10.82□□□□□ -0.68
SMAD4-217ENST00000611848 EXOC6BQ9Y2D4 811 aa10.82□□□□□ -0.68
SMAD4-217ENST00000611848 FAM205AQ6ZU69 1335 aa10.82□□□□□ -0.68
SMAD4-217ENST00000611848 SMC5Q8IY18 1101 aa10.81□□□□□ -0.68
SMAD4-217ENST00000611848 MICALL2Q8IY33 904 aa10.81□□□□□ -0.68
SMAD4-217ENST00000611848 KIF1BPQ96EK5 621 aa10.81□□□□□ -0.68
SMAD4-217ENST00000611848 XAGE2Q96GT9 111 aa10.81□□□□□ -0.68
SMAD4-217ENST00000611848 NEUROD6Q96NK8 337 aa10.81□□□□□ -0.68
SMAD4-217ENST00000611848 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.81□□□□□ -0.68
SMAD4-217ENST00000611848 USP17L8P0C7I0 530 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 ADORA1P30542 326 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 ZNF280AP59817 542 aaPredicted RBP10.8□□□□□ -0.68
SMAD4-217ENST00000611848 EAPPQ56P03 285 aaPredicted RBP10.8□□□□□ -0.68
SMAD4-217ENST00000611848 TNNI3KQ59H18 835 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 CCDC102BQ68D86 513 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 LDHDQ86WU2 507 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 OGFOD1Q8N543 542 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 RHPN1Q8TCX5 695 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 TBC1D22AQ8WUA7 517 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 DDRGK1Q96HY6 314 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 HDAC9Q9UKV0 1011 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 FPGT-TNNI3KV9GXZ4 949 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 SPDYE4A6NLX3 237 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 SEMA3EO15041 775 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 PHKA1P46020 1223 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 GORABQ5T7V8 394 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 SMC1BQ8NDV3 1235 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 DCTPP1Q9H773 170 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 DENND2AQ9ULE3 1009 aa10.8□□□□□ -0.68
SMAD4-217ENST00000611848 IQSEC3Q9UPP2 1182 aaPredicted RBP10.8□□□□□ -0.68
SMAD4-217ENST00000611848 FSTL1Q12841 308 aa10.79□□□□□ -0.68
SMAD4-217ENST00000611848 CHAF1AQ13111 956 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-217ENST00000611848 MFSD14BQ5SR56 506 aa10.79□□□□□ -0.68
SMAD4-217ENST00000611848 WDR66Q8TBY9 1149 aa10.79□□□□□ -0.68
SMAD4-217ENST00000611848 ZC3H15Q8WU90 426 aaKnown RBP10.79□□□□□ -0.68
SMAD4-217ENST00000611848 MXD3Q9BW11 206 aa10.79□□□□□ -0.68
SMAD4-217ENST00000611848 JAG2Q9Y219 1238 aa10.79□□□□□ -0.68
SMAD4-217ENST00000611848 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
SMAD4-217ENST00000611848 POLR2AP24928 1970 aaKnown RBP10.78□□□□□ -0.68
SMAD4-217ENST00000611848 ADAMTSL1Q8N6G6 1762 aa10.78□□□□□ -0.68
SMAD4-217ENST00000611848 SHTN1A0MZ66 631 aa10.78□□□□□ -0.68
SMAD4-217ENST00000611848 C1QTNF8P60827 252 aa10.78□□□□□ -0.68
SMAD4-217ENST00000611848 CCDC158Q5M9N0 1113 aa10.78□□□□□ -0.68
SMAD4-217ENST00000611848 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
SMAD4-217ENST00000611848 SAMD7Q7Z3H4 446 aa10.78□□□□□ -0.68
SMAD4-217ENST00000611848 KIAA0825Q8IV33 1275 aa10.78□□□□□ -0.68
SMAD4-217ENST00000611848 CLASRPQ8N2M8 674 aaKnown RBP10.78□□□□□ -0.68
SMAD4-217ENST00000611848 CERS5Q8N5B7 392 aa10.78□□□□□ -0.68
SMAD4-217ENST00000611848 EAF2Q96CJ1 260 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-217ENST00000611848 MYOZ2Q9NPC6 264 aa10.78□□□□□ -0.68
SMAD4-217ENST00000611848 SUGT1Q9Y2Z0 365 aa10.78□□□□□ -0.68
SMAD4-217ENST00000611848 PDS5AQ29RF7 1337 aaKnown RBP10.77□□□□□ -0.68
SMAD4-217ENST00000611848 APBB1O00213 710 aa10.77□□□□□ -0.68
SMAD4-217ENST00000611848 UQCRFS1P1P0C7P4 283 aa10.77□□□□□ -0.68
SMAD4-217ENST00000611848 POTEIP0CG38 1075 aa10.77□□□□□ -0.68
SMAD4-217ENST00000611848 POTEJP0CG39 1038 aa10.77□□□□□ -0.68
SMAD4-217ENST00000611848 ARID4AP29374 1257 aaPredicted RBP10.77□□□□□ -0.68
SMAD4-217ENST00000611848 HIRAP54198 1017 aaPredicted RBP10.77□□□□□ -0.68
SMAD4-217ENST00000611848 KIF4BQ2VIQ3 1234 aa10.77□□□□□ -0.68
SMAD4-217ENST00000611848 TBC1D10BQ4KMP7 808 aaPredicted RBP10.77□□□□□ -0.68
SMAD4-217ENST00000611848 AACSQ86V21 672 aa10.77□□□□□ -0.68
SMAD4-217ENST00000611848 ZGPATQ8N5A5 531 aaKnown RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms