RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 PTPN12Q05209 780 aaKnown RBP16.96■□□□□ 0.31
POLR2J3-219ENST00000608621 ARMC9Q7Z3E5 817 aa16.96■□□□□ 0.31
POLR2J3-219ENST00000608621 CNNM1Q9NRU3 951 aa16.96■□□□□ 0.31
POLR2J3-219ENST00000608621 F8W031 263 aaPredicted RBP16.95■□□□□ 0.3
POLR2J3-219ENST00000608621 TM4SF4P48230 202 aa16.95■□□□□ 0.3
POLR2J3-219ENST00000608621 MKRN3Q13064 507 aaKnown RBP16.95■□□□□ 0.3
POLR2J3-219ENST00000608621 MTMR14Q8NCE2 650 aa16.95■□□□□ 0.3
POLR2J3-219ENST00000608621 SRCIN1Q9C0H9 1055 aa16.95■□□□□ 0.3
POLR2J3-219ENST00000608621 PCDHAC2Q9Y5I4 1007 aa16.95■□□□□ 0.3
POLR2J3-219ENST00000608621 TBC1D8O95759 1140 aa16.94■□□□□ 0.3
POLR2J3-219ENST00000608621 DEFB129Q9H1M3 183 aa16.94■□□□□ 0.3
POLR2J3-219ENST00000608621 ANGEL1Q9UNK9 670 aaKnown RBP16.94■□□□□ 0.3
POLR2J3-219ENST00000608621 FZD1Q9UP38 647 aa16.94■□□□□ 0.3
POLR2J3-219ENST00000608621 JAG2Q9Y219 1238 aa16.94■□□□□ 0.3
POLR2J3-219ENST00000608621 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
POLR2J3-219ENST00000608621 CFAP100Q494V2 611 aa16.93■□□□□ 0.3
POLR2J3-219ENST00000608621 LDLRAD1Q5T700 205 aa16.93■□□□□ 0.3
POLR2J3-219ENST00000608621 CTU1Q7Z7A3 348 aaKnown RBP16.93■□□□□ 0.3
POLR2J3-219ENST00000608621 SUCLG2Q96I99 432 aa16.93■□□□□ 0.3
POLR2J3-219ENST00000608621 PRMT6Q96LA8 375 aaPredicted RBP16.93■□□□□ 0.3
POLR2J3-219ENST00000608621 PUS3Q9BZE2 481 aaKnown RBP16.93■□□□□ 0.3
POLR2J3-219ENST00000608621 KAZALD1Q96I82 304 aa16.92■□□□□ 0.3
POLR2J3-219ENST00000608621 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
POLR2J3-219ENST00000608621 CLRN2A0PK11 232 aa16.91■□□□□ 0.3
POLR2J3-219ENST00000608621 SPDYE2BA6NHP3 402 aa16.91■□□□□ 0.3
POLR2J3-219ENST00000608621 MYO1BO43795 1136 aa16.91■□□□□ 0.3
POLR2J3-219ENST00000608621 NBPF7P0C2Y1 421 aaPredicted RBP16.91■□□□□ 0.3
POLR2J3-219ENST00000608621 SPDYE6P0CI01 402 aa16.91■□□□□ 0.3
POLR2J3-219ENST00000608621 RBM5P52756 815 aaKnown RBP eCLIP16.91■□□□□ 0.3
POLR2J3-219ENST00000608621 UBE4AQ14139 1066 aa16.91■□□□□ 0.3
POLR2J3-219ENST00000608621 TDRD7Q8NHU6 1098 aaKnown RBP16.91■□□□□ 0.3
POLR2J3-219ENST00000608621 SLC10A4Q96EP9 437 aa16.91■□□□□ 0.3
POLR2J3-219ENST00000608621 A0A1B0GUL6 1792 aa16.9■□□□□ 0.3
POLR2J3-219ENST00000608621 HIBADHP31937 336 aaKnown RBP16.9■□□□□ 0.3
POLR2J3-219ENST00000608621 GYG1P46976 350 aa16.9■□□□□ 0.3
POLR2J3-219ENST00000608621 SREBF2Q12772 1141 aa16.9■□□□□ 0.3
POLR2J3-219ENST00000608621 SPRYD7Q5W111 196 aa16.9■□□□□ 0.3
POLR2J3-219ENST00000608621 MRPL50Q8N5N7 158 aaKnown RBP16.9■□□□□ 0.3
POLR2J3-219ENST00000608621 ZNF296Q8WUU4 475 aaPredicted RBP16.9■□□□□ 0.3
POLR2J3-219ENST00000608621 FAM84BQ96KN1 310 aaPredicted RBP16.9■□□□□ 0.3
POLR2J3-219ENST00000608621 VEZTQ9HBM0 779 aa16.9■□□□□ 0.3
POLR2J3-219ENST00000608621 FAM205AQ6ZU69 1335 aa16.9■□□□□ 0.3
POLR2J3-219ENST00000608621 ZNF521Q96K83 1311 aa16.9■□□□□ 0.3
POLR2J3-219ENST00000608621 GPR25O00155 361 aa16.89■□□□□ 0.29
POLR2J3-219ENST00000608621 PPP1R12BO60237 982 aaPredicted RBP16.89■□□□□ 0.29
POLR2J3-219ENST00000608621 MAP3K11Q16584 847 aa16.89■□□□□ 0.29
POLR2J3-219ENST00000608621 RIPOR2Q9Y4F9 1068 aa16.89■□□□□ 0.29
POLR2J3-219ENST00000608621 PPP2R3BQ9Y5P8 575 aa16.89■□□□□ 0.29
POLR2J3-219ENST00000608621 UTYO14607 1347 aa16.89■□□□□ 0.29
POLR2J3-219ENST00000608621 AOX1Q06278 1338 aa16.89■□□□□ 0.29
POLR2J3-219ENST00000608621 COL1A1P02452 1464 aaPredicted RBP16.88■□□□□ 0.29
POLR2J3-219ENST00000608621 SUPT20HL1Q3ZLR7 823 aa16.88■□□□□ 0.29
POLR2J3-219ENST00000608621 MFSD14BQ5SR56 506 aa16.88■□□□□ 0.29
POLR2J3-219ENST00000608621 NBPF12Q5TAG4 269 aaPredicted RBP16.88■□□□□ 0.29
POLR2J3-219ENST00000608621 BICC1Q9H694 974 aaKnown RBP16.88■□□□□ 0.29
POLR2J3-219ENST00000608621 SOX10P56693 466 aa16.87■□□□□ 0.29
POLR2J3-219ENST00000608621 RASA3Q14644 834 aa16.87■□□□□ 0.29
POLR2J3-219ENST00000608621 CLMNQ96JQ2 1002 aa16.87■□□□□ 0.29
POLR2J3-219ENST00000608621 R3HDMLQ9H3Y0 253 aa16.87■□□□□ 0.29
POLR2J3-219ENST00000608621 TTF2Q9UNY4 1162 aaKnown RBP16.87■□□□□ 0.29
POLR2J3-219ENST00000608621 USP2O75604 605 aaPredicted RBP16.86■□□□□ 0.29
POLR2J3-219ENST00000608621 INHBEP58166 350 aa16.86■□□□□ 0.29
POLR2J3-219ENST00000608621 PKN2Q16513 984 aaKnown RBP16.86■□□□□ 0.29
POLR2J3-219ENST00000608621 RABL6Q3YEC7 729 aaPredicted RBP16.86■□□□□ 0.29
POLR2J3-219ENST00000608621 LRRC24Q50LG9 513 aa16.86■□□□□ 0.29
POLR2J3-219ENST00000608621 NOM1Q5C9Z4 860 aaKnown RBP16.86■□□□□ 0.29
POLR2J3-219ENST00000608621 TDRD3Q9H7E2 651 aaKnown RBP16.86■□□□□ 0.29
POLR2J3-219ENST00000608621 HPS5Q9UPZ3 1129 aa16.86■□□□□ 0.29
POLR2J3-219ENST00000608621 MROH5Q6ZUA9 1318 aa16.86■□□□□ 0.29
POLR2J3-219ENST00000608621 ECM29Q5VYK3 1845 aa16.85■□□□□ 0.29
POLR2J3-219ENST00000608621 MANSC4A6NHS7 340 aaPredicted RBP16.85■□□□□ 0.29
POLR2J3-219ENST00000608621 FBXO33Q7Z6M2 555 aa16.85■□□□□ 0.29
POLR2J3-219ENST00000608621 ANKRD44Q8N8A2 993 aa16.85■□□□□ 0.29
POLR2J3-219ENST00000608621 WNK4Q96J92 1243 aa16.85■□□□□ 0.29
POLR2J3-219ENST00000608621 CFHR5Q9BXR6 569 aa16.85■□□□□ 0.29
POLR2J3-219ENST00000608621 ZNF70Q9UC06 446 aaPredicted RBP16.85■□□□□ 0.29
POLR2J3-219ENST00000608621 SERPINA10Q9UK55 444 aa16.85■□□□□ 0.29
POLR2J3-219ENST00000608621 IQSEC3Q9UPP2 1182 aaPredicted RBP16.85■□□□□ 0.29
POLR2J3-219ENST00000608621 SSC5DA1L4H1 1573 aa16.85■□□□□ 0.29
POLR2J3-219ENST00000608621 UNCXA6NJT0 531 aa16.84■□□□□ 0.29
POLR2J3-219ENST00000608621 FKTNO75072 461 aa16.84■□□□□ 0.29
POLR2J3-219ENST00000608621 ALDH1A1P00352 501 aa16.84■□□□□ 0.29
POLR2J3-219ENST00000608621 ZBTB48P10074 688 aaPredicted RBP16.84■□□□□ 0.29
POLR2J3-219ENST00000608621 IREB2P48200 963 aaKnown RBP16.84■□□□□ 0.29
POLR2J3-219ENST00000608621 METTL24Q5JXM2 366 aa16.84■□□□□ 0.29
POLR2J3-219ENST00000608621 VPS37DQ86XT2 251 aa16.84■□□□□ 0.29
POLR2J3-219ENST00000608621 DZIP1LQ8IYY4 767 aaKnown RBP16.84■□□□□ 0.29
POLR2J3-219ENST00000608621 SSH1Q8WYL5 1049 aa16.84■□□□□ 0.29
POLR2J3-219ENST00000608621 PTPRCP08575 1304 aa16.84■□□□□ 0.29
POLR2J3-219ENST00000608621 E9PSI1 815 aa16.83■□□□□ 0.28
POLR2J3-219ENST00000608621 CRKP46108 304 aa16.83■□□□□ 0.28
POLR2J3-219ENST00000608621 GRIK5Q16478 980 aa16.83■□□□□ 0.28
POLR2J3-219ENST00000608621 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
POLR2J3-219ENST00000608621 IFNL1Q8IU54 200 aa16.83■□□□□ 0.28
POLR2J3-219ENST00000608621 USP44Q9H0E7 712 aa16.83■□□□□ 0.28
POLR2J3-219ENST00000608621 FRAT2O75474 233 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-219ENST00000608621 PDE8BO95263 885 aa16.82■□□□□ 0.28
POLR2J3-219ENST00000608621 SLFN5Q08AF3 891 aa16.82■□□□□ 0.28
POLR2J3-219ENST00000608621 CHAF1AQ13111 956 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-219ENST00000608621 TNFAIP1Q13829 316 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms