RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	MYOZ2	Q9NPC6	264 aa		13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	KLRK1	P26718	216 aa		13.51	□□□□□ -0.25
TPM2-208	ENST00000607559	SCARF1	Q14162	830 aa		13.51	□□□□□ -0.25
TPM2-208	ENST00000607559	ANKRD44	Q8N8A2	993 aa		13.51	□□□□□ -0.25
TPM2-208	ENST00000607559	PSME4	Q14997	1843 aa		13.5	□□□□□ -0.25
TPM2-208	ENST00000607559	TAF5L	O75529	589 aa		13.5	□□□□□ -0.25
TPM2-208	ENST00000607559	LBX1	P52954	281 aa		13.5	□□□□□ -0.25
TPM2-208	ENST00000607559	RARS	P54136	660 aa	Known RBP	13.5	□□□□□ -0.25
TPM2-208	ENST00000607559	OGFOD1	Q8N543	542 aa		13.5	□□□□□ -0.25
TPM2-208	ENST00000607559	MTMR14	Q8NCE2	650 aa		13.5	□□□□□ -0.25
TPM2-208	ENST00000607559	ZNF594	Q96JF6	807 aa	Predicted RBP	13.5	□□□□□ -0.25
TPM2-208	ENST00000607559	BICC1	Q9H694	974 aa	Known RBP	13.5	□□□□□ -0.25
TPM2-208	ENST00000607559	MROH5	Q6ZUA9	1318 aa		13.49	□□□□□ -0.25
TPM2-208	ENST00000607559	SNAP23	O00161	211 aa		13.49	□□□□□ -0.25
TPM2-208	ENST00000607559	SASH1	O94885	1247 aa		13.49	□□□□□ -0.25
TPM2-208	ENST00000607559	HSPA8	P11142	646 aa	Known RBP	13.49	□□□□□ -0.25
TPM2-208	ENST00000607559	RBM26	Q5T8P6	1007 aa	Known RBP	13.49	□□□□□ -0.25
TPM2-208	ENST00000607559	CYP4F22	Q6NT55	531 aa		13.49	□□□□□ -0.25
TPM2-208	ENST00000607559	HELB	Q8NG08	1087 aa	Predicted RBP	13.49	□□□□□ -0.25
TPM2-208	ENST00000607559	TDRD7	Q8NHU6	1098 aa	Known RBP	13.49	□□□□□ -0.25
TPM2-208	ENST00000607559	SMC4	Q9NTJ3	1288 aa		13.49	□□□□□ -0.25
TPM2-208	ENST00000607559	FAM205A	Q6ZU69	1335 aa		13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	WNT10B	O00744	389 aa		13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	CA12	O43570	354 aa		13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	KCNJ4	P48050	445 aa		13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	FKBP1B	P68106	108 aa		13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	ZNF804A	Q7Z570	1209 aa		13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	SULF1	Q8IWU6	871 aa		13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	VGLL2	Q8N8G2	317 aa		13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	FAM84B	Q96KN1	310 aa	Predicted RBP	13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	PUS3	Q9BZE2	481 aa	Known RBP	13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	API5	Q9BZZ5	524 aa	Known RBP	13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	CNNM1	Q9NRU3	951 aa		13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	GGA3	Q9NZ52	723 aa		13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	CHMP3	Q9Y3E7	222 aa		13.48	□□□□□ -0.25
TPM2-208	ENST00000607559	ASTN2	O75129	1339 aa	Predicted RBP	13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	RFX5	P48382	616 aa	Predicted RBP	13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	CLCN6	P51797	869 aa		13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	GTF2I	P78347	998 aa		13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	GRM1	Q13255	1194 aa		13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	GSE1	Q14687	1217 aa		13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	NBPF9	Q3BBW0	867 aa		13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	TAF7L	Q5H9L4	462 aa		13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	ANGEL2	Q5VTE6	544 aa	Known RBP	13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	INTS3	Q68E01	1043 aa	Known RBP	13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	FBXO33	Q7Z6M2	555 aa		13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	CERS5	Q8N5B7	392 aa		13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	GBA2	Q9HCG7	927 aa	Predicted RBP	13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	NOB1	Q9ULX3	412 aa	Known RBP	13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	HDAC5	Q9UQL6	1122 aa		13.47	□□□□□ -0.25
TPM2-208	ENST00000607559	THSD7B	Q9C0I4	1608 aa		13.46	□□□□□ -0.25
TPM2-208	ENST00000607559	ZNF646	O15015	1829 aa	Predicted RBP	13.46	□□□□□ -0.25
TPM2-208	ENST00000607559	KIF16B	Q96L93	1317 aa		13.46	□□□□□ -0.25
TPM2-208	ENST00000607559	PDE8B	O95263	885 aa		13.46	□□□□□ -0.25
TPM2-208	ENST00000607559	DIEXF	Q68CQ4	756 aa	Known RBP	13.46	□□□□□ -0.25
TPM2-208	ENST00000607559	DLK2	Q6UY11	383 aa		13.46	□□□□□ -0.25
TPM2-208	ENST00000607559	C2orf69	Q8N8R5	385 aa		13.46	□□□□□ -0.25
TPM2-208	ENST00000607559	MXD3	Q9BW11	206 aa		13.46	□□□□□ -0.25
TPM2-208	ENST00000607559	ZNF408	Q9H9D4	720 aa		13.46	□□□□□ -0.25
TPM2-208	ENST00000607559	POLR2A	P24928	1970 aa	Known RBP	13.45	□□□□□ -0.26
TPM2-208	ENST00000607559	FAM155A	B1AL88	458 aa	Predicted RBP	13.45	□□□□□ -0.26
TPM2-208	ENST00000607559	ADM5	C9JUS6	153 aa		13.45	□□□□□ -0.26
TPM2-208	ENST00000607559	FGFR2	P21802	821 aa		13.45	□□□□□ -0.26
TPM2-208	ENST00000607559	PTPN12	Q05209	780 aa	Known RBP	13.45	□□□□□ -0.26
TPM2-208	ENST00000607559	NOG	Q13253	232 aa		13.45	□□□□□ -0.26
TPM2-208	ENST00000607559	CCDC102A	Q96A19	550 aa		13.45	□□□□□ -0.26
TPM2-208	ENST00000607559	MRI	Q9BWK5	157 aa		13.45	□□□□□ -0.26
TPM2-208	ENST00000607559	HDAC9	Q9UKV0	1011 aa		13.45	□□□□□ -0.26
TPM2-208	ENST00000607559	AOC2	O75106	756 aa		13.44	□□□□□ -0.26
TPM2-208	ENST00000607559	HIBADH	P31937	336 aa	Known RBP	13.44	□□□□□ -0.26
TPM2-208	ENST00000607559	HUNK	P57058	714 aa		13.44	□□□□□ -0.26
TPM2-208	ENST00000607559	LRRC24	Q50LG9	513 aa		13.44	□□□□□ -0.26
TPM2-208	ENST00000607559	RGMB	Q6NW40	437 aa		13.44	□□□□□ -0.26
TPM2-208	ENST00000607559	CDCA5	Q96FF9	252 aa		13.44	□□□□□ -0.26
TPM2-208	ENST00000607559	CIAO1	O76071	339 aa		13.43	□□□□□ -0.26
TPM2-208	ENST00000607559	MTX1	Q13505	466 aa		13.43	□□□□□ -0.26
TPM2-208	ENST00000607559	ATG9A	Q7Z3C6	839 aa		13.43	□□□□□ -0.26
TPM2-208	ENST00000607559	KIAA0825	Q8IV33	1275 aa		13.43	□□□□□ -0.26
TPM2-208	ENST00000607559	KIF12	Q96FN5	646 aa		13.43	□□□□□ -0.26
TPM2-208	ENST00000607559	EYA2	O00167	538 aa		13.42	□□□□□ -0.26
TPM2-208	ENST00000607559	IPO8	O15397	1037 aa	Known RBP	13.42	□□□□□ -0.26
TPM2-208	ENST00000607559	MAP3K13	O43283	966 aa		13.42	□□□□□ -0.26
TPM2-208	ENST00000607559	GALR2	O43603	387 aa	Predicted RBP	13.42	□□□□□ -0.26
TPM2-208	ENST00000607559	PLIN1	O60240	522 aa		13.42	□□□□□ -0.26
TPM2-208	ENST00000607559	UBTFL1	P0CB47	393 aa	Predicted RBP	13.42	□□□□□ -0.26
TPM2-208	ENST00000607559	PYGB	P11216	843 aa		13.42	□□□□□ -0.26
TPM2-208	ENST00000607559	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.42	□□□□□ -0.26
TPM2-208	ENST00000607559	SERPINA10	Q9UK55	444 aa		13.42	□□□□□ -0.26
TPM2-208	ENST00000607559	SPEF2	Q9C093	1822 aa		13.41	□□□□□ -0.26
TPM2-208	ENST00000607559	UNCX	A6NJT0	531 aa		13.41	□□□□□ -0.26
TPM2-208	ENST00000607559	GYG1	P46976	350 aa		13.41	□□□□□ -0.26
TPM2-208	ENST00000607559	HDLBP	Q00341	1268 aa	Known RBP	13.41	□□□□□ -0.26
TPM2-208	ENST00000607559	DLGAP5	Q15398	846 aa		13.41	□□□□□ -0.26
TPM2-208	ENST00000607559	COPRS	Q9NQ92	184 aa		13.41	□□□□□ -0.26
TPM2-208	ENST00000607559	SUGT1	Q9Y2Z0	365 aa		13.41	□□□□□ -0.26
TPM2-208	ENST00000607559	PPP2R3B	Q9Y5P8	575 aa		13.41	□□□□□ -0.26
TPM2-208	ENST00000607559		A0A1B0GUL6	1792 aa		13.4	□□□□□ -0.26
TPM2-208	ENST00000607559	GNAI3	P08754	354 aa		13.4	□□□□□ -0.26
TPM2-208	ENST00000607559	SLC10A3	P09131	477 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms