RNA–Protein interactions for RNA: ENST00000606170.1

PRDM16-209, Transcript of PR/SET domain 16, humanhuman

TSL 4

Gene PRDM16, Length 557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-209ENST00000606170 WBP1LQ9NX94 342 aa21.03■□□□□ 0.96
PRDM16-209ENST00000606170 IPO8O15397 1037 aaKnown RBP21.02■□□□□ 0.96
PRDM16-209ENST00000606170 PDE8BO95263 885 aa21.02■□□□□ 0.96
PRDM16-209ENST00000606170 VPS37DQ86XT2 251 aa21.02■□□□□ 0.96
PRDM16-209ENST00000606170 MEIS3Q99687 375 aa21.02■□□□□ 0.96
PRDM16-209ENST00000606170 LRRFIP2Q9Y608 721 aaKnown RBP21.02■□□□□ 0.96
PRDM16-209ENST00000606170 RFX5P48382 616 aaPredicted RBP21.01■□□□□ 0.95
PRDM16-209ENST00000606170 IFFO2Q5TF58 517 aa21.01■□□□□ 0.95
PRDM16-209ENST00000606170 TDRD7Q8NHU6 1098 aaKnown RBP21.01■□□□□ 0.95
PRDM16-209ENST00000606170 HDAC5Q9UQL6 1122 aa21.01■□□□□ 0.95
PRDM16-209ENST00000606170 EYA2O00167 538 aa21■□□□□ 0.95
PRDM16-209ENST00000606170 FKBP1AP62942 108 aaKnown RBP21■□□□□ 0.95
PRDM16-209ENST00000606170 PTPN12Q05209 780 aaKnown RBP21■□□□□ 0.95
PRDM16-209ENST00000606170 DLGAP5Q15398 846 aa21■□□□□ 0.95
PRDM16-209ENST00000606170 CAVIN4Q5BKX8 364 aa21■□□□□ 0.95
PRDM16-209ENST00000606170 PRAMEF18Q5VWM3 479 aa21■□□□□ 0.95
PRDM16-209ENST00000606170 INTS3Q68E01 1043 aaKnown RBP21■□□□□ 0.95
PRDM16-209ENST00000606170 VGLL2Q8N8G2 317 aa21■□□□□ 0.95
PRDM16-209ENST00000606170 TNNQ9UQP3 1299 aa21■□□□□ 0.95
PRDM16-209ENST00000606170 FRAT2O75474 233 aaPredicted RBP20.99■□□□□ 0.95
PRDM16-209ENST00000606170 TRIM27P14373 513 aa20.99■□□□□ 0.95
PRDM16-209ENST00000606170 MAP2K2P36507 400 aa20.99■□□□□ 0.95
PRDM16-209ENST00000606170 CTCFP49711 727 aaPredicted RBP20.99■□□□□ 0.95
PRDM16-209ENST00000606170 ATF7IPQ6VMQ6 1270 aa20.99■□□□□ 0.95
PRDM16-209ENST00000606170 CLUAP1Q96AJ1 413 aa20.99■□□□□ 0.95
PRDM16-209ENST00000606170 BEGAINQ9BUH8 593 aa20.99■□□□□ 0.95
PRDM16-209ENST00000606170 SIL1Q9H173 461 aa20.99■□□□□ 0.95
PRDM16-209ENST00000606170 IQSEC3Q9UPP2 1182 aaPredicted RBP20.99■□□□□ 0.95
PRDM16-209ENST00000606170 PUM3Q15397 648 aaKnown RBP20.98■□□□□ 0.95
PRDM16-209ENST00000606170 MFSD14BQ5SR56 506 aa20.98■□□□□ 0.95
PRDM16-209ENST00000606170 RGMBQ6NW40 437 aa20.98■□□□□ 0.95
PRDM16-209ENST00000606170 FAM205AQ6ZU69 1335 aa20.98■□□□□ 0.95
PRDM16-209ENST00000606170 GNAI3P08754 354 aa20.97■□□□□ 0.95
PRDM16-209ENST00000606170 IFIT1P09914 478 aaKnown RBP20.97■□□□□ 0.95
PRDM16-209ENST00000606170 RBM5P52756 815 aaKnown RBP eCLIP20.97■□□□□ 0.95
PRDM16-209ENST00000606170 CHAF1AQ13111 956 aaPredicted RBP20.97■□□□□ 0.95
PRDM16-209ENST00000606170 CFAP100Q494V2 611 aa20.97■□□□□ 0.95
PRDM16-209ENST00000606170 FBXO33Q7Z6M2 555 aa20.97■□□□□ 0.95
PRDM16-209ENST00000606170 ZBED3Q96IU2 234 aaPredicted RBP20.97■□□□□ 0.95
PRDM16-209ENST00000606170 PCDHAC2Q9Y5I4 1007 aa20.97■□□□□ 0.95
PRDM16-209ENST00000606170 BCAMP50895 628 aa20.96■□□□□ 0.95
PRDM16-209ENST00000606170 ZNF157P51786 506 aaPredicted RBP20.96■□□□□ 0.95
PRDM16-209ENST00000606170 APOBEC3FQ8IUX4 373 aaKnown RBP20.96■□□□□ 0.95
PRDM16-209ENST00000606170 TNS4Q8IZW8 715 aa20.96■□□□□ 0.95
PRDM16-209ENST00000606170 FGFR2P21802 821 aa20.95■□□□□ 0.94
PRDM16-209ENST00000606170 LBX1P52954 281 aa20.95■□□□□ 0.94
PRDM16-209ENST00000606170 NOGQ13253 232 aa20.95■□□□□ 0.94
PRDM16-209ENST00000606170 ATG9AQ7Z3C6 839 aa20.95■□□□□ 0.94
PRDM16-209ENST00000606170 MTMR14Q8NCE2 650 aa20.95■□□□□ 0.94
PRDM16-209ENST00000606170 TTF2Q9UNY4 1162 aaKnown RBP20.95■□□□□ 0.94
PRDM16-209ENST00000606170 PA2G4Q9UQ80 394 aaKnown RBP20.95■□□□□ 0.94
PRDM16-209ENST00000606170 THSD7BQ9C0I4 1608 aa20.95■□□□□ 0.94
PRDM16-209ENST00000606170 ZBED9Q6R2W3 1325 aa20.95■□□□□ 0.94
PRDM16-209ENST00000606170 CLRN2A0PK11 232 aa20.94■□□□□ 0.94
PRDM16-209ENST00000606170 MYO1BO43795 1136 aa20.94■□□□□ 0.94
PRDM16-209ENST00000606170 SLC5A1P13866 664 aa20.94■□□□□ 0.94
PRDM16-209ENST00000606170 NF2P35240 595 aa20.94■□□□□ 0.94
PRDM16-209ENST00000606170 TTLL12Q14166 644 aaPredicted RBP20.94■□□□□ 0.94
PRDM16-209ENST00000606170 ZKSCAN2Q63HK3 967 aa20.94■□□□□ 0.94
PRDM16-209ENST00000606170 MOB2Q70IA6 237 aa20.94■□□□□ 0.94
PRDM16-209ENST00000606170 PRMT6Q96LA8 375 aaPredicted RBP20.94■□□□□ 0.94
PRDM16-209ENST00000606170 FBXO3Q9UK99 471 aa20.94■□□□□ 0.94
PRDM16-209ENST00000606170 SPDYE2BA6NHP3 402 aa20.93■□□□□ 0.94
PRDM16-209ENST00000606170 CIAO1O76071 339 aa20.93■□□□□ 0.94
PRDM16-209ENST00000606170 SPDYE6P0CI01 402 aa20.93■□□□□ 0.94
PRDM16-209ENST00000606170 HSPA8P11142 646 aaKnown RBP20.93■□□□□ 0.94
PRDM16-209ENST00000606170 FKBP1BP68106 108 aa20.93■□□□□ 0.94
PRDM16-209ENST00000606170 LPIN2Q92539 896 aa20.93■□□□□ 0.94
PRDM16-209ENST00000606170 CCDC102AQ96A19 550 aa20.93■□□□□ 0.94
PRDM16-209ENST00000606170 ZIC5Q96T25 663 aa20.93■□□□□ 0.94
PRDM16-209ENST00000606170 PRDM10Q9NQV6 1147 aa20.93■□□□□ 0.94
PRDM16-209ENST00000606170 CEP126Q9P2H0 1117 aa20.93■□□□□ 0.94
PRDM16-209ENST00000606170 FAM155AB1AL88 458 aaPredicted RBP20.92■□□□□ 0.94
PRDM16-209ENST00000606170 SRGAP3O43295 1099 aa20.92■□□□□ 0.94
PRDM16-209ENST00000606170 VEZTQ9HBM0 779 aa20.92■□□□□ 0.94
PRDM16-209ENST00000606170 UBE2Q2LH0YL09 131 aa20.91■□□□□ 0.94
PRDM16-209ENST00000606170 IL15P40933 162 aaPredicted RBP20.91■□□□□ 0.94
PRDM16-209ENST00000606170 PRKG1Q13976 671 aa20.91■□□□□ 0.94
PRDM16-209ENST00000606170 ATP2B3Q16720 1220 aa20.91■□□□□ 0.94
PRDM16-209ENST00000606170 TMEM57Q8N5G2 664 aa20.91■□□□□ 0.94
PRDM16-209ENST00000606170 TBC1D22AQ8WUA7 517 aa20.91■□□□□ 0.94
PRDM16-209ENST00000606170 DEFB129Q9H1M3 183 aa20.91■□□□□ 0.94
PRDM16-209ENST00000606170 COPRSQ9NQ92 184 aa20.91■□□□□ 0.94
PRDM16-209ENST00000606170 TSKSQ9UJT2 592 aa20.91■□□□□ 0.94
PRDM16-209ENST00000606170 AOX1Q06278 1338 aa20.9■□□□□ 0.94
PRDM16-209ENST00000606170 GNAI2P04899 355 aa20.9■□□□□ 0.94
PRDM16-209ENST00000606170 GRIK5Q16478 980 aa20.9■□□□□ 0.94
PRDM16-209ENST00000606170 SERPINA10Q9UK55 444 aa20.9■□□□□ 0.94
PRDM16-209ENST00000606170 PAPPA2Q9BXP8 1791 aa20.9■□□□□ 0.94
PRDM16-209ENST00000606170 SLC10A3P09131 477 aa20.89■□□□□ 0.93
PRDM16-209ENST00000606170 CRKP46108 304 aa20.89■□□□□ 0.93
PRDM16-209ENST00000606170 KIF23Q02241 960 aaPredicted RBP20.89■□□□□ 0.93
PRDM16-209ENST00000606170 FTSJ3Q8IY81 847 aaKnown RBP20.89■□□□□ 0.93
PRDM16-209ENST00000606170 TDRD3Q9H7E2 651 aaKnown RBP20.88■□□□□ 0.93
PRDM16-209ENST00000606170 MTX1Q13505 466 aa20.87■□□□□ 0.93
PRDM16-209ENST00000606170 ARMC9Q7Z3E5 817 aa20.87■□□□□ 0.93
PRDM16-209ENST00000606170 RASAL3Q86YV0 1011 aa20.87■□□□□ 0.93
PRDM16-209ENST00000606170 DZIP1LQ8IYY4 767 aaKnown RBP20.87■□□□□ 0.93
PRDM16-209ENST00000606170 FZD1Q9UP38 647 aa20.87■□□□□ 0.93
PRDM16-209ENST00000606170 PPP2R3BQ9Y5P8 575 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms