RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 PRKG1Q13976 671 aa16.66■□□□□ 0.26
RPS28-204ENST00000602140 A0A1B0GUL6 1792 aa16.66■□□□□ 0.26
RPS28-204ENST00000602140 F8W031 263 aaPredicted RBP16.65■□□□□ 0.26
RPS28-204ENST00000602140 MLLT1Q03111 559 aaPredicted RBP16.65■□□□□ 0.26
RPS28-204ENST00000602140 PTPN12Q05209 780 aaKnown RBP16.65■□□□□ 0.26
RPS28-204ENST00000602140 MKRN3Q13064 507 aaKnown RBP16.65■□□□□ 0.26
RPS28-204ENST00000602140 ARMC9Q7Z3E5 817 aa16.65■□□□□ 0.26
RPS28-204ENST00000602140 JAG2Q9Y219 1238 aa16.65■□□□□ 0.26
RPS28-204ENST00000602140 PCDHAC2Q9Y5I4 1007 aa16.65■□□□□ 0.26
RPS28-204ENST00000602140 MTMR14Q8NCE2 650 aa16.64■□□□□ 0.25
RPS28-204ENST00000602140 SUCLG2Q96I99 432 aa16.64■□□□□ 0.25
RPS28-204ENST00000602140 DEFB129Q9H1M3 183 aa16.64■□□□□ 0.25
RPS28-204ENST00000602140 ZNF521Q96K83 1311 aa16.64■□□□□ 0.25
RPS28-204ENST00000602140 FKBP1AP62942 108 aaKnown RBP16.63■□□□□ 0.25
RPS28-204ENST00000602140 CFAP100Q494V2 611 aa16.63■□□□□ 0.25
RPS28-204ENST00000602140 KAZALD1Q96I82 304 aa16.63■□□□□ 0.25
RPS28-204ENST00000602140 ANGEL1Q9UNK9 670 aaKnown RBP16.63■□□□□ 0.25
RPS28-204ENST00000602140 FZD1Q9UP38 647 aa16.63■□□□□ 0.25
RPS28-204ENST00000602140 CLRN2A0PK11 232 aa16.62■□□□□ 0.25
RPS28-204ENST00000602140 MYO1BO43795 1136 aa16.62■□□□□ 0.25
RPS28-204ENST00000602140 TBC1D8O95759 1140 aa16.62■□□□□ 0.25
RPS28-204ENST00000602140 NBPF7P0C2Y1 421 aaPredicted RBP16.62■□□□□ 0.25
RPS28-204ENST00000602140 TM4SF4P48230 202 aa16.62■□□□□ 0.25
RPS28-204ENST00000602140 CTU1Q7Z7A3 348 aaKnown RBP16.62■□□□□ 0.25
RPS28-204ENST00000602140 PRMT6Q96LA8 375 aaPredicted RBP16.62■□□□□ 0.25
RPS28-204ENST00000602140 PUS3Q9BZE2 481 aaKnown RBP16.62■□□□□ 0.25
RPS28-204ENST00000602140 COL1A1P02452 1464 aaPredicted RBP16.61■□□□□ 0.25
RPS28-204ENST00000602140 SPDYE2BA6NHP3 402 aa16.61■□□□□ 0.25
RPS28-204ENST00000602140 SPDYE6P0CI01 402 aa16.61■□□□□ 0.25
RPS28-204ENST00000602140 RBM5P52756 815 aaKnown RBP eCLIP16.61■□□□□ 0.25
RPS28-204ENST00000602140 UBE4AQ14139 1066 aa16.61■□□□□ 0.25
RPS28-204ENST00000602140 LDLRAD1Q5T700 205 aa16.61■□□□□ 0.25
RPS28-204ENST00000602140 GYG1P46976 350 aa16.6■□□□□ 0.25
RPS28-204ENST00000602140 SREBF2Q12772 1141 aa16.6■□□□□ 0.25
RPS28-204ENST00000602140 MRPL50Q8N5N7 158 aaKnown RBP16.6■□□□□ 0.25
RPS28-204ENST00000602140 TDRD7Q8NHU6 1098 aaKnown RBP16.6■□□□□ 0.25
RPS28-204ENST00000602140 BICC1Q9H694 974 aaKnown RBP16.6■□□□□ 0.25
RPS28-204ENST00000602140 VEZTQ9HBM0 779 aa16.6■□□□□ 0.25
RPS28-204ENST00000602140 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.6■□□□□ 0.25
RPS28-204ENST00000602140 RIPOR2Q9Y4F9 1068 aa16.6■□□□□ 0.25
RPS28-204ENST00000602140 PPP2R3BQ9Y5P8 575 aa16.6■□□□□ 0.25
RPS28-204ENST00000602140 UTYO14607 1347 aa16.6■□□□□ 0.25
RPS28-204ENST00000602140 AOX1Q06278 1338 aa16.6■□□□□ 0.25
RPS28-204ENST00000602140 FAM205AQ6ZU69 1335 aa16.6■□□□□ 0.25
RPS28-204ENST00000602140 HIBADHP31937 336 aaKnown RBP16.59■□□□□ 0.25
RPS28-204ENST00000602140 MFSD14BQ5SR56 506 aa16.59■□□□□ 0.25
RPS28-204ENST00000602140 SPRYD7Q5W111 196 aa16.59■□□□□ 0.25
RPS28-204ENST00000602140 ZNF296Q8WUU4 475 aaPredicted RBP16.59■□□□□ 0.25
RPS28-204ENST00000602140 SLC10A4Q96EP9 437 aa16.59■□□□□ 0.25
RPS28-204ENST00000602140 FAM84BQ96KN1 310 aaPredicted RBP16.59■□□□□ 0.25
RPS28-204ENST00000602140 PPP1R12BO60237 982 aaPredicted RBP16.58■□□□□ 0.24
RPS28-204ENST00000602140 MAP3K11Q16584 847 aa16.58■□□□□ 0.24
RPS28-204ENST00000602140 SUPT20HL1Q3ZLR7 823 aa16.58■□□□□ 0.24
RPS28-204ENST00000602140 TTF2Q9UNY4 1162 aaKnown RBP16.58■□□□□ 0.24
RPS28-204ENST00000602140 MROH5Q6ZUA9 1318 aa16.58■□□□□ 0.24
RPS28-204ENST00000602140 SSC5DA1L4H1 1573 aa16.58■□□□□ 0.24
RPS28-204ENST00000602140 ECM29Q5VYK3 1845 aa16.58■□□□□ 0.24
RPS28-204ENST00000602140 PTPRCP08575 1304 aa16.57■□□□□ 0.24
RPS28-204ENST00000602140 GPR25O00155 361 aa16.57■□□□□ 0.24
RPS28-204ENST00000602140 RABL6Q3YEC7 729 aaPredicted RBP16.57■□□□□ 0.24
RPS28-204ENST00000602140 NBPF12Q5TAG4 269 aaPredicted RBP16.57■□□□□ 0.24
RPS28-204ENST00000602140 CLMNQ96JQ2 1002 aa16.57■□□□□ 0.24
RPS28-204ENST00000602140 E9PSI1 815 aa16.56■□□□□ 0.24
RPS28-204ENST00000602140 SOX10P56693 466 aa16.56■□□□□ 0.24
RPS28-204ENST00000602140 RASA3Q14644 834 aa16.56■□□□□ 0.24
RPS28-204ENST00000602140 LRRC24Q50LG9 513 aa16.56■□□□□ 0.24
RPS28-204ENST00000602140 VPS37DQ86XT2 251 aa16.56■□□□□ 0.24
RPS28-204ENST00000602140 ANKRD44Q8N8A2 993 aa16.56■□□□□ 0.24
RPS28-204ENST00000602140 SSH1Q8WYL5 1049 aa16.56■□□□□ 0.24
RPS28-204ENST00000602140 SERPINA10Q9UK55 444 aa16.56■□□□□ 0.24
RPS28-204ENST00000602140 PKN2Q16513 984 aaKnown RBP16.55■□□□□ 0.24
RPS28-204ENST00000602140 NOM1Q5C9Z4 860 aaKnown RBP16.55■□□□□ 0.24
RPS28-204ENST00000602140 METTL24Q5JXM2 366 aa16.55■□□□□ 0.24
RPS28-204ENST00000602140 FBXO33Q7Z6M2 555 aa16.55■□□□□ 0.24
RPS28-204ENST00000602140 WNK4Q96J92 1243 aa16.55■□□□□ 0.24
RPS28-204ENST00000602140 R3HDMLQ9H3Y0 253 aa16.55■□□□□ 0.24
RPS28-204ENST00000602140 TDRD3Q9H7E2 651 aaKnown RBP16.55■□□□□ 0.24
RPS28-204ENST00000602140 ZNF70Q9UC06 446 aaPredicted RBP16.55■□□□□ 0.24
RPS28-204ENST00000602140 IQSEC3Q9UPP2 1182 aaPredicted RBP16.55■□□□□ 0.24
RPS28-204ENST00000602140 MANSC4A6NHS7 340 aaPredicted RBP16.54■□□□□ 0.24
RPS28-204ENST00000602140 USP2O75604 605 aaPredicted RBP16.54■□□□□ 0.24
RPS28-204ENST00000602140 IREB2P48200 963 aaKnown RBP16.54■□□□□ 0.24
RPS28-204ENST00000602140 INHBEP58166 350 aa16.54■□□□□ 0.24
RPS28-204ENST00000602140 SLFN5Q08AF3 891 aa16.54■□□□□ 0.24
RPS28-204ENST00000602140 TNFAIP1Q13829 316 aa16.54■□□□□ 0.24
RPS28-204ENST00000602140 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
RPS28-204ENST00000602140 DZIP1LQ8IYY4 767 aaKnown RBP16.54■□□□□ 0.24
RPS28-204ENST00000602140 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
RPS28-204ENST00000602140 CFHR5Q9BXR6 569 aa16.54■□□□□ 0.24
RPS28-204ENST00000602140 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
RPS28-204ENST00000602140 HPS5Q9UPZ3 1129 aa16.54■□□□□ 0.24
RPS28-204ENST00000602140 UNCXA6NJT0 531 aa16.53■□□□□ 0.24
RPS28-204ENST00000602140 TNRC18O15417 2968 aaPredicted RBP16.53■□□□□ 0.24
RPS28-204ENST00000602140 FKTNO75072 461 aa16.53■□□□□ 0.24
RPS28-204ENST00000602140 FRAT2O75474 233 aaPredicted RBP16.53■□□□□ 0.24
RPS28-204ENST00000602140 PDE8BO95263 885 aa16.53■□□□□ 0.24
RPS28-204ENST00000602140 ALDH1A1P00352 501 aa16.53■□□□□ 0.24
RPS28-204ENST00000602140 ZBTB48P10074 688 aaPredicted RBP16.53■□□□□ 0.24
RPS28-204ENST00000602140 CRKP46108 304 aa16.53■□□□□ 0.24
RPS28-204ENST00000602140 CHAF1AQ13111 956 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms