RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 KAZALD1Q96I82 304 aa21.47■■□□□ 1.03
SCAF1-204ENST00000601038 SUCLG2Q96I99 432 aa21.47■■□□□ 1.03
SCAF1-204ENST00000601038 UTYO14607 1347 aa21.47■■□□□ 1.03
SCAF1-204ENST00000601038 AKAP11Q9UKA4 1901 aa21.47■■□□□ 1.03
SCAF1-204ENST00000601038 NBPF7P0C2Y1 421 aaPredicted RBP21.46■■□□□ 1.03
SCAF1-204ENST00000601038 DGKZQ13574 1117 aa21.46■■□□□ 1.03
SCAF1-204ENST00000601038 MRPL50Q8N5N7 158 aaKnown RBP21.46■■□□□ 1.03
SCAF1-204ENST00000601038 A0A1B0GUL6 1792 aa21.46■■□□□ 1.03
SCAF1-204ENST00000601038 E9PSI1 815 aa21.45■■□□□ 1.02
SCAF1-204ENST00000601038 UBE4AQ14139 1066 aa21.45■■□□□ 1.02
SCAF1-204ENST00000601038 ARMC9Q7Z3E5 817 aa21.44■■□□□ 1.02
SCAF1-204ENST00000601038 DEFB129Q9H1M3 183 aa21.43■■□□□ 1.02
SCAF1-204ENST00000601038 PTPRCP08575 1304 aa21.43■■□□□ 1.02
SCAF1-204ENST00000601038 F8W031 263 aaPredicted RBP21.42■■□□□ 1.02
SCAF1-204ENST00000601038 RABL6Q3YEC7 729 aaPredicted RBP21.42■■□□□ 1.02
SCAF1-204ENST00000601038 TDRD7Q8NHU6 1098 aaKnown RBP21.42■■□□□ 1.02
SCAF1-204ENST00000601038 PUS3Q9BZE2 481 aaKnown RBP21.42■■□□□ 1.02
SCAF1-204ENST00000601038 RIPOR2Q9Y4F9 1068 aa21.42■■□□□ 1.02
SCAF1-204ENST00000601038 COL1A1P02452 1464 aaPredicted RBP21.41■■□□□ 1.02
SCAF1-204ENST00000601038 FAM205AQ6ZU69 1335 aa21.41■■□□□ 1.02
SCAF1-204ENST00000601038 MYO1BO43795 1136 aa21.41■■□□□ 1.02
SCAF1-204ENST00000601038 HIBADHP31937 336 aaKnown RBP21.41■■□□□ 1.02
SCAF1-204ENST00000601038 PTPN12Q05209 780 aaKnown RBP21.41■■□□□ 1.02
SCAF1-204ENST00000601038 SLFN5Q08AF3 891 aa21.41■■□□□ 1.02
SCAF1-204ENST00000601038 CFAP100Q494V2 611 aa21.41■■□□□ 1.02
SCAF1-204ENST00000601038 SSH1Q8WYL5 1049 aa21.41■■□□□ 1.02
SCAF1-204ENST00000601038 FAM84BQ96KN1 310 aaPredicted RBP21.41■■□□□ 1.02
SCAF1-204ENST00000601038 BICC1Q9H694 974 aaKnown RBP21.41■■□□□ 1.02
SCAF1-204ENST00000601038 JAG2Q9Y219 1238 aa21.41■■□□□ 1.02
SCAF1-204ENST00000601038 PPP2R3BQ9Y5P8 575 aa21.41■■□□□ 1.02
SCAF1-204ENST00000601038 MROH5Q6ZUA9 1318 aa21.4■■□□□ 1.02
SCAF1-204ENST00000601038 SPDYE2BA6NHP3 402 aa21.4■■□□□ 1.02
SCAF1-204ENST00000601038 SPDYE6P0CI01 402 aa21.4■■□□□ 1.02
SCAF1-204ENST00000601038 TM4SF4P48230 202 aa21.4■■□□□ 1.02
SCAF1-204ENST00000601038 PRKG1Q13976 671 aa21.4■■□□□ 1.02
SCAF1-204ENST00000601038 LDLRAD1Q5T700 205 aa21.4■■□□□ 1.02
SCAF1-204ENST00000601038 PRMT6Q96LA8 375 aaPredicted RBP21.4■■□□□ 1.02
SCAF1-204ENST00000601038 PCDHAC2Q9Y5I4 1007 aa21.4■■□□□ 1.02
SCAF1-204ENST00000601038 GYG1P46976 350 aa21.39■■□□□ 1.01
SCAF1-204ENST00000601038 RGS19P49795 217 aa21.39■■□□□ 1.01
SCAF1-204ENST00000601038 ANKRD44Q8N8A2 993 aa21.39■■□□□ 1.01
SCAF1-204ENST00000601038 ANGEL1Q9UNK9 670 aaKnown RBP21.39■■□□□ 1.01
SCAF1-204ENST00000601038 MFSD14BQ5SR56 506 aa21.38■■□□□ 1.01
SCAF1-204ENST00000601038 USP44Q9H0E7 712 aa21.38■■□□□ 1.01
SCAF1-204ENST00000601038 CLRN2A0PK11 232 aa21.37■■□□□ 1.01
SCAF1-204ENST00000601038 RBM5P52756 815 aaKnown RBP eCLIP21.37■■□□□ 1.01
SCAF1-204ENST00000601038 MAP3K11Q16584 847 aa21.37■■□□□ 1.01
SCAF1-204ENST00000601038 PPP1R12BO60237 982 aaPredicted RBP21.36■■□□□ 1.01
SCAF1-204ENST00000601038 MKRN3Q13064 507 aaKnown RBP21.36■■□□□ 1.01
SCAF1-204ENST00000601038 ALDH1L2Q3SY69 923 aa21.36■■□□□ 1.01
SCAF1-204ENST00000601038 SUPT20HL1Q3ZLR7 823 aa21.36■■□□□ 1.01
SCAF1-204ENST00000601038 LRRC24Q50LG9 513 aa21.36■■□□□ 1.01
SCAF1-204ENST00000601038 FBXO33Q7Z6M2 555 aa21.36■■□□□ 1.01
SCAF1-204ENST00000601038 ECM29Q5VYK3 1845 aa21.36■■□□□ 1.01
SCAF1-204ENST00000601038 SREBF2Q12772 1141 aa21.35■■□□□ 1.01
SCAF1-204ENST00000601038 METTL24Q5JXM2 366 aa21.35■■□□□ 1.01
SCAF1-204ENST00000601038 SPRYD7Q5W111 196 aa21.35■■□□□ 1.01
SCAF1-204ENST00000601038 CTU1Q7Z7A3 348 aaKnown RBP21.35■■□□□ 1.01
SCAF1-204ENST00000601038 CDCA7LQ96GN5 454 aa21.35■■□□□ 1.01
SCAF1-204ENST00000601038 VEZTQ9HBM0 779 aa21.35■■□□□ 1.01
SCAF1-204ENST00000601038 SERPINA10Q9UK55 444 aa21.35■■□□□ 1.01
SCAF1-204ENST00000601038 TTF2Q9UNY4 1162 aaKnown RBP21.35■■□□□ 1.01
SCAF1-204ENST00000601038 FZD1Q9UP38 647 aa21.35■■□□□ 1.01
SCAF1-204ENST00000601038 AOX1Q06278 1338 aa21.34■■□□□ 1.01
SCAF1-204ENST00000601038 UNCXA6NJT0 531 aa21.34■■□□□ 1.01
SCAF1-204ENST00000601038 PDE8BO95263 885 aa21.34■■□□□ 1.01
SCAF1-204ENST00000601038 TBC1D8O95759 1140 aa21.34■■□□□ 1.01
SCAF1-204ENST00000601038 MLLT1Q03111 559 aaPredicted RBP21.34■■□□□ 1.01
SCAF1-204ENST00000601038 VPS37DQ86XT2 251 aa21.34■■□□□ 1.01
SCAF1-204ENST00000601038 VGLL2Q8N8G2 317 aa21.34■■□□□ 1.01
SCAF1-204ENST00000601038 SLC10A4Q96EP9 437 aa21.34■■□□□ 1.01
SCAF1-204ENST00000601038 RASA3Q14644 834 aa21.33■■□□□ 1.01
SCAF1-204ENST00000601038 CAVIN4Q5BKX8 364 aa21.33■■□□□ 1.01
SCAF1-204ENST00000601038 NOM1Q5C9Z4 860 aaKnown RBP21.33■■□□□ 1.01
SCAF1-204ENST00000601038 TRMT2AQ8IZ69 625 aaKnown RBP21.33■■□□□ 1.01
SCAF1-204ENST00000601038 SSC5DA1L4H1 1573 aa21.32■■□□□ 1
SCAF1-204ENST00000601038 TNFAIP1Q13829 316 aa21.32■■□□□ 1
SCAF1-204ENST00000601038 SPDYE2Q495Y8 402 aa21.32■■□□□ 1
SCAF1-204ENST00000601038 NBPF12Q5TAG4 269 aaPredicted RBP21.32■■□□□ 1
SCAF1-204ENST00000601038 KLHDC4Q8TBB5 520 aa21.32■■□□□ 1
SCAF1-204ENST00000601038 CFHR5Q9BXR6 569 aa21.32■■□□□ 1
SCAF1-204ENST00000601038 ZNF70Q9UC06 446 aaPredicted RBP21.32■■□□□ 1
SCAF1-204ENST00000601038 INHBEP58166 350 aa21.31■■□□□ 1
SCAF1-204ENST00000601038 DZIP1LQ8IYY4 767 aaKnown RBP21.31■■□□□ 1
SCAF1-204ENST00000601038 ZNF296Q8WUU4 475 aaPredicted RBP21.31■■□□□ 1
SCAF1-204ENST00000601038 TDRD3Q9H7E2 651 aaKnown RBP21.31■■□□□ 1
SCAF1-204ENST00000601038 SMC4Q9NTJ3 1288 aa21.31■■□□□ 1
SCAF1-204ENST00000601038 MANSC4A6NHS7 340 aaPredicted RBP21.3■■□□□ 1
SCAF1-204ENST00000601038 GPR25O00155 361 aa21.3■■□□□ 1
SCAF1-204ENST00000601038 FRAT2O75474 233 aaPredicted RBP21.3■■□□□ 1
SCAF1-204ENST00000601038 CT47B1P0C2W7 299 aaPredicted RBP21.3■■□□□ 1
SCAF1-204ENST00000601038 ZBTB48P10074 688 aaPredicted RBP21.3■■□□□ 1
SCAF1-204ENST00000601038 CRKP46108 304 aa21.3■■□□□ 1
SCAF1-204ENST00000601038 IREB2P48200 963 aaKnown RBP21.3■■□□□ 1
SCAF1-204ENST00000601038 TBC1D22AQ8WUA7 517 aa21.3■■□□□ 1
SCAF1-204ENST00000601038 CLMNQ96JQ2 1002 aa21.3■■□□□ 1
SCAF1-204ENST00000601038 IQSEC3Q9UPP2 1182 aaPredicted RBP21.3■■□□□ 1
SCAF1-204ENST00000601038 USP2O75604 605 aaPredicted RBP21.29■■□□□ 1
SCAF1-204ENST00000601038 ALDH1A1P00352 501 aa21.29■■□□□ 1
SCAF1-204ENST00000601038 HDLBPQ00341 1268 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms