RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 JMYQ8N9B5 988 aa16.76■□□□□ 0.27
ARHGEF1-222ENST00000600517 BCAMP50895 628 aa16.75■□□□□ 0.27
ARHGEF1-222ENST00000600517 ITPRIPQ8IWB1 547 aa16.75■□□□□ 0.27
ARHGEF1-222ENST00000600517 PANK1Q8TE04 598 aa16.75■□□□□ 0.27
ARHGEF1-222ENST00000600517 GGA3Q9NZ52 723 aa16.75■□□□□ 0.27
ARHGEF1-222ENST00000600517 MKRN1Q9UHC7 482 aaKnown RBP16.75■□□□□ 0.27
ARHGEF1-222ENST00000600517 HDAC9Q9UKV0 1011 aa16.75■□□□□ 0.27
ARHGEF1-222ENST00000600517 PNMA6EA0A0J9YXQ4 647 aa16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 RASSF10A6NK89 507 aa16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 WNT10BO00744 389 aa16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 SLC5A1P13866 664 aa16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 ATP8B2P98198 1209 aa16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 ATP2B3Q16720 1220 aa16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 NBPF9Q3BBW0 867 aa16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 ANGEL2Q5VTE6 544 aaKnown RBP16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 DLK2Q6UY11 383 aa16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 SULF1Q8IWU6 871 aa16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 ZBED3Q96IU2 234 aaPredicted RBP16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 JAG2Q9Y219 1238 aa16.74■□□□□ 0.27
ARHGEF1-222ENST00000600517 ZNF646O15015 1829 aaPredicted RBP16.73■□□□□ 0.27
ARHGEF1-222ENST00000600517 CELF2O95319 508 aaKnown RBP16.73■□□□□ 0.27
ARHGEF1-222ENST00000600517 MTMR14Q8NCE2 650 aa16.73■□□□□ 0.27
ARHGEF1-222ENST00000600517 CNTNAP1P78357 1384 aa16.73■□□□□ 0.27
ARHGEF1-222ENST00000600517 PITPNM2Q9BZ72 1349 aa16.72■□□□□ 0.27
ARHGEF1-222ENST00000600517 ADM5C9JUS6 153 aa16.72■□□□□ 0.27
ARHGEF1-222ENST00000600517 POLA2Q14181 598 aa16.72■□□□□ 0.27
ARHGEF1-222ENST00000600517 DEFB115Q30KQ5 88 aa16.72■□□□□ 0.27
ARHGEF1-222ENST00000600517 MFSD14BQ5SR56 506 aa16.72■□□□□ 0.27
ARHGEF1-222ENST00000600517 ABT1Q9ULW3 272 aaKnown RBP16.72■□□□□ 0.27
ARHGEF1-222ENST00000600517 IQSEC3Q9UPP2 1182 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF1-222ENST00000600517 FRAT2O75474 233 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF1-222ENST00000600517 DLGAP5Q15398 846 aa16.71■□□□□ 0.27
ARHGEF1-222ENST00000600517 SSH3Q8TE77 659 aa16.71■□□□□ 0.27
ARHGEF1-222ENST00000600517 TBC1D22AQ8WUA7 517 aa16.71■□□□□ 0.27
ARHGEF1-222ENST00000600517 TLL2Q9Y6L7 1015 aa16.71■□□□□ 0.27
ARHGEF1-222ENST00000600517 F8W031 263 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF1-222ENST00000600517 ZBTB22O15209 634 aa16.7■□□□□ 0.26
ARHGEF1-222ENST00000600517 VEGFBP49765 207 aa16.7■□□□□ 0.26
ARHGEF1-222ENST00000600517 TFCP2Q12800 502 aa16.7■□□□□ 0.26
ARHGEF1-222ENST00000600517 G3BP1Q13283 466 aaKnown RBP eCLIP16.7■□□□□ 0.26
ARHGEF1-222ENST00000600517 SAPCD2Q86UD0 394 aa16.7■□□□□ 0.26
ARHGEF1-222ENST00000600517 C1orf115Q9H7X2 142 aa16.7■□□□□ 0.26
ARHGEF1-222ENST00000600517 ZNF408Q9H9D4 720 aa16.7■□□□□ 0.26
ARHGEF1-222ENST00000600517 AKAP2Q9Y2D5 859 aa16.7■□□□□ 0.26
ARHGEF1-222ENST00000600517 TIMM10P62072 90 aa16.69■□□□□ 0.26
ARHGEF1-222ENST00000600517 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF1-222ENST00000600517 CFAP100Q494V2 611 aa16.69■□□□□ 0.26
ARHGEF1-222ENST00000600517 CDCA5Q96FF9 252 aa16.69■□□□□ 0.26
ARHGEF1-222ENST00000600517 TTF2Q9UNY4 1162 aaKnown RBP16.69■□□□□ 0.26
ARHGEF1-222ENST00000600517 MVPQ14764 893 aaKnown RBP16.68■□□□□ 0.26
ARHGEF1-222ENST00000600517 HHIPL1Q96JK4 782 aa16.68■□□□□ 0.26
ARHGEF1-222ENST00000600517 PRMT6Q96LA8 375 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF1-222ENST00000600517 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
ARHGEF1-222ENST00000600517 SERPINA10Q9UK55 444 aa16.68■□□□□ 0.26
ARHGEF1-222ENST00000600517 DDX19BQ9UMR2 479 aa16.68■□□□□ 0.26
ARHGEF1-222ENST00000600517 PCDHAC2Q9Y5I4 1007 aa16.68■□□□□ 0.26
ARHGEF1-222ENST00000600517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF1-222ENST00000600517 A0A1B0GUL7 405 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 SEMA3EO15041 775 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 ADORA1P30542 326 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 HDLBPQ00341 1268 aaKnown RBP16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 PDE3AQ14432 1141 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 GRIK5Q16478 980 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 C2orf69Q8N8R5 385 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 WDR66Q8TBY9 1149 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 MRIQ9BWK5 157 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 GBA2Q9HCG7 927 aaPredicted RBP16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 SUGT1Q9Y2Z0 365 aa16.67■□□□□ 0.26
ARHGEF1-222ENST00000600517 PHKA1P46020 1223 aa16.66■□□□□ 0.26
ARHGEF1-222ENST00000600517 CCDC102BQ68D86 513 aa16.66■□□□□ 0.26
ARHGEF1-222ENST00000600517 CEP85Q6P2H3 762 aa16.66■□□□□ 0.26
ARHGEF1-222ENST00000600517 APOBEC3FQ8IUX4 373 aaKnown RBP16.66■□□□□ 0.26
ARHGEF1-222ENST00000600517 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF1-222ENST00000600517 SCAF8Q9UPN6 1271 aaKnown RBP16.66■□□□□ 0.26
ARHGEF1-222ENST00000600517 WDR33Q9C0J8 1336 aaKnown RBP16.66■□□□□ 0.26
ARHGEF1-222ENST00000600517 MYO1BO43795 1136 aa16.65■□□□□ 0.26
ARHGEF1-222ENST00000600517 SURF6O75683 361 aaKnown RBP16.65■□□□□ 0.26
ARHGEF1-222ENST00000600517 ECE1P42892 770 aa16.65■□□□□ 0.26
ARHGEF1-222ENST00000600517 RBM5P52756 815 aaKnown RBP eCLIP16.65■□□□□ 0.26
ARHGEF1-222ENST00000600517 XAGE2Q96GT9 111 aa16.65■□□□□ 0.26
ARHGEF1-222ENST00000600517 CAPNS2Q96L46 248 aa16.65■□□□□ 0.26
ARHGEF1-222ENST00000600517 CHMP4BQ9H444 224 aaKnown RBP16.65■□□□□ 0.26
ARHGEF1-222ENST00000600517 GPR108Q9NPR9 543 aa16.65■□□□□ 0.26
ARHGEF1-222ENST00000600517 ZBTB40Q9NUA8 1239 aa16.65■□□□□ 0.26
ARHGEF1-222ENST00000600517 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
ARHGEF1-222ENST00000600517 CRKP46108 304 aa16.64■□□□□ 0.25
ARHGEF1-222ENST00000600517 HUNKP57058 714 aa16.64■□□□□ 0.25
ARHGEF1-222ENST00000600517 FKBP1BP68106 108 aa16.64■□□□□ 0.25
ARHGEF1-222ENST00000600517 C20orf194Q5TEA3 1177 aa16.64■□□□□ 0.25
ARHGEF1-222ENST00000600517 PRAMEF18Q5VWM3 479 aa16.64■□□□□ 0.25
ARHGEF1-222ENST00000600517 CYP4F22Q6NT55 531 aa16.64■□□□□ 0.25
ARHGEF1-222ENST00000600517 RPAP2Q8IXW5 612 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF1-222ENST00000600517 NEUROD6Q96NK8 337 aa16.64■□□□□ 0.25
ARHGEF1-222ENST00000600517 TRPM7Q96QT4 1865 aa16.64■□□□□ 0.25
ARHGEF1-222ENST00000600517 AOX1Q06278 1338 aa16.64■□□□□ 0.25
ARHGEF1-222ENST00000600517 POLR2AP24928 1970 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms