RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 DBNLQ9UJU6 430 aaKnown RBP16.95■□□□□ 0.3
VRK3-219ENST00000600137 RPS12P25398 132 aaKnown RBP16.94■□□□□ 0.3
VRK3-219ENST00000600137 FKBP1AP62942 108 aaKnown RBP16.94■□□□□ 0.3
VRK3-219ENST00000600137 GRIK5Q16478 980 aa16.94■□□□□ 0.3
VRK3-219ENST00000600137 AGBL3Q8NEM8 1001 aa16.94■□□□□ 0.3
VRK3-219ENST00000600137 CNOT7Q9UIV1 285 aaKnown RBP16.94■□□□□ 0.3
VRK3-219ENST00000600137 JAG2Q9Y219 1238 aa16.94■□□□□ 0.3
VRK3-219ENST00000600137 APBB1O00213 710 aa16.93■□□□□ 0.3
VRK3-219ENST00000600137 SMARCA5O60264 1052 aaPredicted RBP16.93■□□□□ 0.3
VRK3-219ENST00000600137 HACL1Q9UJ83 578 aa16.93■□□□□ 0.3
VRK3-219ENST00000600137 AKAP11Q9UKA4 1901 aa16.93■□□□□ 0.3
VRK3-219ENST00000600137 EGFRP00533 1210 aa16.92■□□□□ 0.3
VRK3-219ENST00000600137 POTEIP0CG38 1075 aa16.92■□□□□ 0.3
VRK3-219ENST00000600137 POTEJP0CG39 1038 aa16.92■□□□□ 0.3
VRK3-219ENST00000600137 ARID4AP29374 1257 aaPredicted RBP16.92■□□□□ 0.3
VRK3-219ENST00000600137 HIRAP54198 1017 aaPredicted RBP16.92■□□□□ 0.3
VRK3-219ENST00000600137 ZNF280AP59817 542 aaPredicted RBP16.92■□□□□ 0.3
VRK3-219ENST00000600137 SCARF1Q14162 830 aa16.92■□□□□ 0.3
VRK3-219ENST00000600137 VPS37DQ86XT2 251 aa16.92■□□□□ 0.3
VRK3-219ENST00000600137 ADAMTSL1Q8N6G6 1762 aa16.92■□□□□ 0.3
VRK3-219ENST00000600137 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
VRK3-219ENST00000600137 EPHX2P34913 555 aa16.91■□□□□ 0.3
VRK3-219ENST00000600137 RASGRF1Q13972 1273 aa16.91■□□□□ 0.3
VRK3-219ENST00000600137 AACSQ86V21 672 aa16.91■□□□□ 0.3
VRK3-219ENST00000600137 SMC5Q8IY18 1101 aa16.91■□□□□ 0.3
VRK3-219ENST00000600137 MICALL2Q8IY33 904 aa16.91■□□□□ 0.3
VRK3-219ENST00000600137 ZNF512BQ96KM6 892 aaPredicted RBP16.91■□□□□ 0.3
VRK3-219ENST00000600137 LRRCC1Q9C099 1032 aa16.91■□□□□ 0.3
VRK3-219ENST00000600137 MYH13Q9UKX3 1938 aa16.91■□□□□ 0.3
VRK3-219ENST00000600137 IQCA1LA6NCM1 817 aa16.9■□□□□ 0.3
VRK3-219ENST00000600137 SEMA3EO15041 775 aa16.9■□□□□ 0.3
VRK3-219ENST00000600137 MCAMP43121 646 aa16.9■□□□□ 0.3
VRK3-219ENST00000600137 CLASRPQ8N2M8 674 aaKnown RBP16.9■□□□□ 0.3
VRK3-219ENST00000600137 FBXW7Q969H0 707 aa16.9■□□□□ 0.3
VRK3-219ENST00000600137 HMG20BQ9P0W2 317 aa16.9■□□□□ 0.3
VRK3-219ENST00000600137 MYO3BQ8WXR4 1341 aa16.9■□□□□ 0.3
VRK3-219ENST00000600137 USP17L8P0C7I0 530 aa16.89■□□□□ 0.29
VRK3-219ENST00000600137 CHAF1AQ13111 956 aaPredicted RBP16.89■□□□□ 0.29
VRK3-219ENST00000600137 MFSD14BQ5SR56 506 aa16.89■□□□□ 0.29
VRK3-219ENST00000600137 PI16Q6UXB8 463 aa16.89■□□□□ 0.29
VRK3-219ENST00000600137 SAMD7Q7Z3H4 446 aa16.89■□□□□ 0.29
VRK3-219ENST00000600137 TRPM4Q8TD43 1214 aa16.89■□□□□ 0.29
VRK3-219ENST00000600137 ZBED3Q96IU2 234 aaPredicted RBP16.89■□□□□ 0.29
VRK3-219ENST00000600137 RWDD1Q9H446 243 aaPredicted RBP16.89■□□□□ 0.29
VRK3-219ENST00000600137 ADARB2Q9NS39 739 aaKnown RBP16.89■□□□□ 0.29
VRK3-219ENST00000600137 GNL3LQ9NVN8 582 aaKnown RBP16.89■□□□□ 0.29
VRK3-219ENST00000600137 DENND2AQ9ULE3 1009 aa16.89■□□□□ 0.29
VRK3-219ENST00000600137 PDS5AQ29RF7 1337 aaKnown RBP16.89■□□□□ 0.29
VRK3-219ENST00000600137 KIAA0825Q8IV33 1275 aa16.88■□□□□ 0.29
VRK3-219ENST00000600137 C16orf71Q8IYS4 520 aaPredicted RBP16.88■□□□□ 0.29
VRK3-219ENST00000600137 GCC1Q96CN9 775 aa16.88■□□□□ 0.29
VRK3-219ENST00000600137 PGAP2Q9UHJ9 254 aa16.88■□□□□ 0.29
VRK3-219ENST00000600137 SALL1Q9NSC2 1324 aa16.88■□□□□ 0.29
VRK3-219ENST00000600137 H7C1D1 291 aa16.87■□□□□ 0.29
VRK3-219ENST00000600137 FRAT2O75474 233 aaPredicted RBP16.87■□□□□ 0.29
VRK3-219ENST00000600137 UQCRFS1P1P0C7P4 283 aa16.87■□□□□ 0.29
VRK3-219ENST00000600137 LMOD1P29536 600 aaPredicted RBP16.87■□□□□ 0.29
VRK3-219ENST00000600137 GORABQ5T7V8 394 aa16.87■□□□□ 0.29
VRK3-219ENST00000600137 USP50Q70EL3 339 aaPredicted RBP16.87■□□□□ 0.29
VRK3-219ENST00000600137 WDR66Q8TBY9 1149 aa16.87■□□□□ 0.29
VRK3-219ENST00000600137 TBC1D22AQ8WUA7 517 aa16.87■□□□□ 0.29
VRK3-219ENST00000600137 PCDHAC2Q9Y5I4 1007 aa16.87■□□□□ 0.29
VRK3-219ENST00000600137 TOMM70O94826 608 aa16.86■□□□□ 0.29
VRK3-219ENST00000600137 TBC1D10BQ4KMP7 808 aaPredicted RBP16.86■□□□□ 0.29
VRK3-219ENST00000600137 CCDC158Q5M9N0 1113 aa16.86■□□□□ 0.29
VRK3-219ENST00000600137 PNMA8AQ86V59 439 aaPredicted RBP16.86■□□□□ 0.29
VRK3-219ENST00000600137 SPATA5Q8NB90 893 aa16.86■□□□□ 0.29
VRK3-219ENST00000600137 SALL3Q9BXA9 1300 aa16.86■□□□□ 0.29
VRK3-219ENST00000600137 POLR2AP24928 1970 aaKnown RBP16.86■□□□□ 0.29
VRK3-219ENST00000600137 MYO5AQ9Y4I1 1855 aaKnown RBP16.85■□□□□ 0.29
VRK3-219ENST00000600137 F8W031 263 aaPredicted RBP16.85■□□□□ 0.29
VRK3-219ENST00000600137 PRDX5P30044 214 aa16.85■□□□□ 0.29
VRK3-219ENST00000600137 MMP14P50281 582 aa16.85■□□□□ 0.29
VRK3-219ENST00000600137 TTC39AQ5SRH9 613 aa16.85■□□□□ 0.29
VRK3-219ENST00000600137 MTMR14Q8NCE2 650 aa16.85■□□□□ 0.29
VRK3-219ENST00000600137 OTUD7AQ8TE49 926 aaPredicted RBP16.85■□□□□ 0.29
VRK3-219ENST00000600137 ZNF384Q8TF68 577 aa16.85■□□□□ 0.29
VRK3-219ENST00000600137 MRIQ9BWK5 157 aa16.85■□□□□ 0.29
VRK3-219ENST00000600137 MYOZ2Q9NPC6 264 aa16.85■□□□□ 0.29
VRK3-219ENST00000600137 SNRKQ9NRH2 765 aa16.85■□□□□ 0.29
VRK3-219ENST00000600137 SUGT1Q9Y2Z0 365 aa16.85■□□□□ 0.29
VRK3-219ENST00000600137 AOX1Q06278 1338 aa16.85■□□□□ 0.29
VRK3-219ENST00000600137 CYP2E1P05181 493 aaPredicted RBP16.84■□□□□ 0.29
VRK3-219ENST00000600137 IFIT2P09913 472 aaKnown RBP16.84■□□□□ 0.29
VRK3-219ENST00000600137 ZAP70P43403 619 aa16.84■□□□□ 0.29
VRK3-219ENST00000600137 RBM26Q5T8P6 1007 aaKnown RBP16.84■□□□□ 0.29
VRK3-219ENST00000600137 ANKRD45Q5TZF3 282 aa16.84■□□□□ 0.29
VRK3-219ENST00000600137 TBC1D9Q6ZT07 1266 aa16.84■□□□□ 0.29
VRK3-219ENST00000600137 RBM46Q8TBY0 533 aaKnown RBP16.84■□□□□ 0.29
VRK3-219ENST00000600137 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
VRK3-219ENST00000600137 ASTN2O75129 1339 aaPredicted RBP16.84■□□□□ 0.29
VRK3-219ENST00000600137 WNT10BO00744 389 aa16.83■□□□□ 0.28
VRK3-219ENST00000600137 ATP5JP18859 108 aa16.83■□□□□ 0.28
VRK3-219ENST00000600137 HDLBPQ00341 1268 aaKnown RBP16.83■□□□□ 0.28
VRK3-219ENST00000600137 KIF4BQ2VIQ3 1234 aa16.83■□□□□ 0.28
VRK3-219ENST00000600137 NBPF9Q3BBW0 867 aa16.83■□□□□ 0.28
VRK3-219ENST00000600137 EAPPQ56P03 285 aaPredicted RBP16.83■□□□□ 0.28
VRK3-219ENST00000600137 LDHDQ86WU2 507 aa16.83■□□□□ 0.28
VRK3-219ENST00000600137 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.83■□□□□ 0.28
VRK3-219ENST00000600137 NDUFB9Q9Y6M9 179 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms