RNA–Protein interactions for RNA: ENST00000599825.2

LSP1P1-201, Transcript of LSP1 pseudogene 1, humanhuman

BASIC

Gene LSP1P1, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P1-201ENST00000599825 IQSEC3Q9UPP2 1182 aaPredicted RBP12.86□□□□□ -0.35
LSP1P1-201ENST00000599825 TBC1D8O95759 1140 aa12.85□□□□□ -0.35
LSP1P1-201ENST00000599825 GYG1P46976 350 aa12.85□□□□□ -0.35
LSP1P1-201ENST00000599825 SOX10P56693 466 aa12.85□□□□□ -0.35
LSP1P1-201ENST00000599825 APOBEC3FQ8IUX4 373 aaKnown RBP12.85□□□□□ -0.35
LSP1P1-201ENST00000599825 AKAP11Q9UKA4 1901 aa12.85□□□□□ -0.35
LSP1P1-201ENST00000599825 AOX1Q06278 1338 aa12.85□□□□□ -0.35
LSP1P1-201ENST00000599825 CACNA1FO60840 1977 aa12.84□□□□□ -0.35
LSP1P1-201ENST00000599825 NBPF7P0C2Y1 421 aaPredicted RBP12.84□□□□□ -0.35
LSP1P1-201ENST00000599825 FKBP1BP68106 108 aa12.84□□□□□ -0.35
LSP1P1-201ENST00000599825 CHAF1AQ13111 956 aaPredicted RBP12.84□□□□□ -0.35
LSP1P1-201ENST00000599825 CFAP100Q494V2 611 aa12.84□□□□□ -0.35
LSP1P1-201ENST00000599825 SAGE1Q9NXZ1 904 aa12.84□□□□□ -0.35
LSP1P1-201ENST00000599825 PTPN12Q05209 780 aaKnown RBP12.83□□□□□ -0.36
LSP1P1-201ENST00000599825 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
LSP1P1-201ENST00000599825 ARMC9Q7Z3E5 817 aa12.83□□□□□ -0.36
LSP1P1-201ENST00000599825 KLHDC4Q8TBB5 520 aa12.83□□□□□ -0.36
LSP1P1-201ENST00000599825 BICC1Q9H694 974 aaKnown RBP12.83□□□□□ -0.36
LSP1P1-201ENST00000599825 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
LSP1P1-201ENST00000599825 ALDH1L1O75891 902 aa12.82□□□□□ -0.36
LSP1P1-201ENST00000599825 MLLT1Q03111 559 aaPredicted RBP12.82□□□□□ -0.36
LSP1P1-201ENST00000599825 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
LSP1P1-201ENST00000599825 DEFB129Q9H1M3 183 aa12.82□□□□□ -0.36
LSP1P1-201ENST00000599825 MYO1BO43795 1136 aa12.81□□□□□ -0.36
LSP1P1-201ENST00000599825 FRAT2O75474 233 aaPredicted RBP12.81□□□□□ -0.36
LSP1P1-201ENST00000599825 LRRC24Q50LG9 513 aa12.81□□□□□ -0.36
LSP1P1-201ENST00000599825 METTL24Q5JXM2 366 aa12.81□□□□□ -0.36
LSP1P1-201ENST00000599825 MFSD14BQ5SR56 506 aa12.81□□□□□ -0.36
LSP1P1-201ENST00000599825 VPS37DQ86XT2 251 aa12.81□□□□□ -0.36
LSP1P1-201ENST00000599825 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
LSP1P1-201ENST00000599825 CLMNQ96JQ2 1002 aa12.81□□□□□ -0.36
LSP1P1-201ENST00000599825 PRMT6Q96LA8 375 aaPredicted RBP12.81□□□□□ -0.36
LSP1P1-201ENST00000599825 TTF2Q9UNY4 1162 aaKnown RBP12.81□□□□□ -0.36
LSP1P1-201ENST00000599825 SSC5DA1L4H1 1573 aa12.81□□□□□ -0.36
LSP1P1-201ENST00000599825 SPDYE2BA6NHP3 402 aa12.8□□□□□ -0.36
LSP1P1-201ENST00000599825 SPDYE6P0CI01 402 aa12.8□□□□□ -0.36
LSP1P1-201ENST00000599825 IL1R1P14778 569 aa12.8□□□□□ -0.36
LSP1P1-201ENST00000599825 HIBADHP31937 336 aaKnown RBP12.8□□□□□ -0.36
LSP1P1-201ENST00000599825 NBPF12Q5TAG4 269 aaPredicted RBP12.8□□□□□ -0.36
LSP1P1-201ENST00000599825 CTU1Q7Z7A3 348 aaKnown RBP12.8□□□□□ -0.36
LSP1P1-201ENST00000599825 SSH1Q8WYL5 1049 aa12.8□□□□□ -0.36
LSP1P1-201ENST00000599825 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
LSP1P1-201ENST00000599825 ZBED3Q96IU2 234 aaPredicted RBP12.8□□□□□ -0.36
LSP1P1-201ENST00000599825 TCP10L2B9ZVM9 353 aa12.79□□□□□ -0.36
LSP1P1-201ENST00000599825 ZNF296Q8WUU4 475 aaPredicted RBP12.79□□□□□ -0.36
LSP1P1-201ENST00000599825 TDRD3Q9H7E2 651 aaKnown RBP12.79□□□□□ -0.36
LSP1P1-201ENST00000599825 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
LSP1P1-201ENST00000599825 CACNB3P54284 484 aa12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 SREBF2Q12772 1141 aa12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 RASA3Q14644 834 aa12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 GRIK5Q16478 980 aa12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 C15orf52Q6ZUT6 534 aaKnown RBP12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 ANKRD44Q8N8A2 993 aa12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 SLC10A4Q96EP9 437 aa12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 R3HDMLQ9H3Y0 253 aa12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 ECM29Q5VYK3 1845 aa12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 COL1A1P02452 1464 aaPredicted RBP12.78□□□□□ -0.36
LSP1P1-201ENST00000599825 E9PSI1 815 aa12.77□□□□□ -0.37
LSP1P1-201ENST00000599825 PPP1R12BO60237 982 aaPredicted RBP12.77□□□□□ -0.37
LSP1P1-201ENST00000599825 UBE4AQ14139 1066 aa12.77□□□□□ -0.37
LSP1P1-201ENST00000599825 SPRYD7Q5W111 196 aa12.77□□□□□ -0.37
LSP1P1-201ENST00000599825 TDRD7Q8NHU6 1098 aaKnown RBP12.77□□□□□ -0.37
LSP1P1-201ENST00000599825 FAM84BQ96KN1 310 aaPredicted RBP12.77□□□□□ -0.37
LSP1P1-201ENST00000599825 SIL1Q9H173 461 aa12.77□□□□□ -0.37
LSP1P1-201ENST00000599825 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
LSP1P1-201ENST00000599825 MROH5Q6ZUA9 1318 aa12.77□□□□□ -0.37
LSP1P1-201ENST00000599825 ARAP2Q8WZ64 1704 aa12.76□□□□□ -0.37
LSP1P1-201ENST00000599825 GPR25O00155 361 aa12.76□□□□□ -0.37
LSP1P1-201ENST00000599825 CRKP46108 304 aa12.76□□□□□ -0.37
LSP1P1-201ENST00000599825 BCAMP50895 628 aa12.76□□□□□ -0.37
LSP1P1-201ENST00000599825 CAVIN4Q5BKX8 364 aa12.76□□□□□ -0.37
LSP1P1-201ENST00000599825 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
LSP1P1-201ENST00000599825 WNK4Q96J92 1243 aa12.76□□□□□ -0.37
LSP1P1-201ENST00000599825 TMEM39BQ9GZU3 492 aa12.76□□□□□ -0.37
LSP1P1-201ENST00000599825 ZNF70Q9UC06 446 aaPredicted RBP12.76□□□□□ -0.37
LSP1P1-201ENST00000599825 RIPOR2Q9Y4F9 1068 aa12.76□□□□□ -0.37
LSP1P1-201ENST00000599825 PTPRCP08575 1304 aa12.76□□□□□ -0.37
LSP1P1-201ENST00000599825 IREB2P48200 963 aaKnown RBP12.75□□□□□ -0.37
LSP1P1-201ENST00000599825 SUPT20HL1Q3ZLR7 823 aa12.75□□□□□ -0.37
LSP1P1-201ENST00000599825 LDLRAD1Q5T700 205 aa12.75□□□□□ -0.37
LSP1P1-201ENST00000599825 FAM205AQ6ZU69 1335 aa12.75□□□□□ -0.37
LSP1P1-201ENST00000599825 DZIP1LQ8IYY4 767 aaKnown RBP12.75□□□□□ -0.37
LSP1P1-201ENST00000599825 MTMR14Q8NCE2 650 aa12.75□□□□□ -0.37
LSP1P1-201ENST00000599825 HPS5Q9UPZ3 1129 aa12.75□□□□□ -0.37
LSP1P1-201ENST00000599825 OTOFQ9HC10 1997 aa12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 UTYO14607 1347 aa12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 FKTNO75072 461 aa12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 TM4SF4P48230 202 aa12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 MMP14P50281 582 aa12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 FKBP1AP62942 108 aaKnown RBP12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 SLFN5Q08AF3 891 aa12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 RABL6Q3YEC7 729 aaPredicted RBP12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 SPDYE2Q495Y8 402 aa12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 PPP2R3BQ9Y5P8 575 aa12.74□□□□□ -0.37
LSP1P1-201ENST00000599825 MANSC4A6NHS7 340 aaPredicted RBP12.73□□□□□ -0.37
LSP1P1-201ENST00000599825 IGF2BP3O00425 579 aaKnown RBP eCLIP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms