RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 RIC1Q4ADV7 1423 aa5.99□□□□□ -1.45
HERC3-213ENST00000598772 KCNQ3O43525 872 aa5.99□□□□□ -1.45
HERC3-213ENST00000598772 SASH1O94885 1247 aa5.99□□□□□ -1.45
HERC3-213ENST00000598772 GNRH1P01148 92 aa5.99□□□□□ -1.45
HERC3-213ENST00000598772 ELNP15502 786 aa5.99□□□□□ -1.45
HERC3-213ENST00000598772 OSBPP22059 807 aa5.99□□□□□ -1.45
HERC3-213ENST00000598772 ZNF280AP59817 542 aaPredicted RBP5.99□□□□□ -1.45
HERC3-213ENST00000598772 PDE3AQ14432 1141 aa5.99□□□□□ -1.45
HERC3-213ENST00000598772 RSBN1LQ6PCB5 846 aaPredicted RBP5.99□□□□□ -1.45
HERC3-213ENST00000598772 ZNF428Q96B54 188 aa5.99□□□□□ -1.45
HERC3-213ENST00000598772 PUS7Q96PZ0 661 aaKnown RBP5.99□□□□□ -1.45
HERC3-213ENST00000598772 EYA3Q99504 573 aa5.99□□□□□ -1.45
HERC3-213ENST00000598772 TTYH1Q9H313 450 aaPredicted RBP5.99□□□□□ -1.45
HERC3-213ENST00000598772 CPA4Q9UI42 421 aa5.99□□□□□ -1.45
HERC3-213ENST00000598772 HCLS1P14317 486 aaPredicted RBP5.98□□□□□ -1.45
HERC3-213ENST00000598772 FAM43AQ8N2R8 423 aa5.98□□□□□ -1.45
HERC3-213ENST00000598772 OGFOD1Q8N543 542 aa5.98□□□□□ -1.45
HERC3-213ENST00000598772 AGBL3Q8NEM8 1001 aa5.98□□□□□ -1.45
HERC3-213ENST00000598772 BRI3BPQ8WY22 251 aa5.98□□□□□ -1.45
HERC3-213ENST00000598772 RNF166Q96A37 237 aaPredicted RBP5.98□□□□□ -1.45
HERC3-213ENST00000598772 OPTNQ96CV9 577 aa5.98□□□□□ -1.45
HERC3-213ENST00000598772 NBPF3Q9H094 633 aa5.98□□□□□ -1.45
HERC3-213ENST00000598772 BMP2KQ9NSY1 1161 aaPredicted RBP5.98□□□□□ -1.45
HERC3-213ENST00000598772 THEGQ9P2T0 379 aa5.98□□□□□ -1.45
HERC3-213ENST00000598772 POLLQ9UGP5 575 aa5.98□□□□□ -1.45
HERC3-213ENST00000598772 TRPC6Q9Y210 931 aa5.98□□□□□ -1.45
HERC3-213ENST00000598772 TCF20Q9UGU0 1960 aaKnown RBP5.98□□□□□ -1.45
HERC3-213ENST00000598772 TAF1P21675 1872 aa5.98□□□□□ -1.45
HERC3-213ENST00000598772 SMIM22K7EJ46 135 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 ADCY3O60266 1144 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 TLR2O60603 784 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 INHAP05111 366 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 HMOX1P09601 288 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 CTGFP29279 349 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 IREB2P48200 963 aaKnown RBP5.97□□□□□ -1.45
HERC3-213ENST00000598772 GPSM2P81274 684 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 PRKCZQ05513 592 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 KIF6Q6ZMV9 814 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 PPP1R42Q7Z4L9 355 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 ZBTB38Q8NAP3 1195 aaPredicted RBP5.97□□□□□ -1.45
HERC3-213ENST00000598772 MXD3Q9BW11 206 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 CARD14Q9BXL6 1004 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 ZBTB3Q9H5J0 574 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 C11orf49Q9H6J7 331 aa5.97□□□□□ -1.45
HERC3-213ENST00000598772 RRP7AQ9Y3A4 280 aaKnown RBP5.97□□□□□ -1.45
HERC3-213ENST00000598772 TESPA1A2RU30 521 aaPredicted RBP5.96□□□□□ -1.46
HERC3-213ENST00000598772 BTBD11A6QL63 1104 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 WNT10BO00744 389 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 KRT37O76014 449 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 IGFBP4P22692 258 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 GTF2A2P52657 109 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 NHLH1Q02575 133 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 GRAPQ13588 217 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 GRIN2CQ14957 1233 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 SHHQ15465 462 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 MTHFSDQ2M296 383 aaKnown RBP5.96□□□□□ -1.46
HERC3-213ENST00000598772 NBPF10Q6P3W6 841 aaKnown RBP5.96□□□□□ -1.46
HERC3-213ENST00000598772 APOBEC3FQ8IUX4 373 aaKnown RBP5.96□□□□□ -1.46
HERC3-213ENST00000598772 GRAPLQ8TC17 118 aaPredicted RBP5.96□□□□□ -1.46
HERC3-213ENST00000598772 HS3ST6Q96QI5 342 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 DEFB129Q9H1M3 183 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 GABRQQ9UN88 632 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 ZSWIM8A7E2V4 1837 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 ZDBF2Q9HCK1 2354 aa5.96□□□□□ -1.46
HERC3-213ENST00000598772 KDM3BQ7LBC6 1761 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 USP17L3A6NCW0 530 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 USP17L4A6NCW7 530 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 FOXK2Q01167 660 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 SUPT20HL1Q3ZLR7 823 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 POTEEQ6S8J3 1075 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 USP17L1Q7RTZ2 530 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 PKD1L2Q7Z442 2459 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 ANKRD13AQ8IZ07 590 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 TBC1D16Q8TBP0 767 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 MS4A4AQ96JQ5 239 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 GAS2L1Q99501 681 aaPredicted RBP5.95□□□□□ -1.46
HERC3-213ENST00000598772 POLR3GLQ9BT43 218 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 UTP14AQ9BVJ6 771 aaKnown RBP5.95□□□□□ -1.46
HERC3-213ENST00000598772 ANKIB1Q9P2G1 1089 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 UBN2Q6ZU65 1347 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 FAM205AQ6ZU69 1335 aa5.95□□□□□ -1.46
HERC3-213ENST00000598772 CACNA1BQ00975 2339 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 USP2O75604 605 aaPredicted RBP5.94□□□□□ -1.46
HERC3-213ENST00000598772 UFL1O94874 794 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 NTSR2O95665 410 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 SNRPA1P09661 255 aaKnown RBP5.94□□□□□ -1.46
HERC3-213ENST00000598772 MYL6BP14649 208 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 FCGRTP55899 365 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 SKIV2LQ15477 1246 aaKnown RBP5.94□□□□□ -1.46
HERC3-213ENST00000598772 NBPF12Q5TAG4 269 aaPredicted RBP5.94□□□□□ -1.46
HERC3-213ENST00000598772 TTLL7Q6ZT98 887 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 MICALL1Q8N3F8 863 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 HELBQ8NG08 1087 aaPredicted RBP5.94□□□□□ -1.46
HERC3-213ENST00000598772 NECTIN2Q92692 538 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 COL26A1Q96A83 441 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 SIN3AQ96ST3 1273 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 TSPYL2Q9H2G4 693 aaPredicted RBP5.94□□□□□ -1.46
HERC3-213ENST00000598772 VEZTQ9HBM0 779 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 PRKAG2Q9UGJ0 569 aa5.94□□□□□ -1.46
HERC3-213ENST00000598772 MYO9BQ13459 2157 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms