RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 PTPN12Q05209 780 aaKnown RBP21.56■■□□□ 1.04
PNKP-210ENST00000597965 EXOSC9Q06265 439 aaKnown RBP21.56■■□□□ 1.04
PNKP-210ENST00000597965 BEND3Q5T5X7 828 aa21.56■■□□□ 1.04
PNKP-210ENST00000597965 LDLRAD1Q5T700 205 aa21.56■■□□□ 1.04
PNKP-210ENST00000597965 MANSC4A6NHS7 340 aaPredicted RBP21.55■■□□□ 1.04
PNKP-210ENST00000597965 GPR25O00155 361 aa21.55■■□□□ 1.04
PNKP-210ENST00000597965 TAF5LO75529 589 aa21.55■■□□□ 1.04
PNKP-210ENST00000597965 LDHAL6AQ6ZMR3 332 aa21.55■■□□□ 1.04
PNKP-210ENST00000597965 SLC10A4Q96EP9 437 aa21.55■■□□□ 1.04
PNKP-210ENST00000597965 C9orf78Q9NZ63 289 aaPredicted RBP21.55■■□□□ 1.04
PNKP-210ENST00000597965 HPS5Q9UPZ3 1129 aa21.55■■□□□ 1.04
PNKP-210ENST00000597965 ECM29Q5VYK3 1845 aa21.55■■□□□ 1.04
PNKP-210ENST00000597965 GRM8O00222 908 aa21.54■■□□□ 1.04
PNKP-210ENST00000597965 ZBTB48P10074 688 aaPredicted RBP21.54■■□□□ 1.04
PNKP-210ENST00000597965 SOX10P56693 466 aa21.54■■□□□ 1.04
PNKP-210ENST00000597965 PRKG1Q13976 671 aa21.54■■□□□ 1.04
PNKP-210ENST00000597965 MAP3K11Q16584 847 aa21.54■■□□□ 1.04
PNKP-210ENST00000597965 SPRYD7Q5W111 196 aa21.54■■□□□ 1.04
PNKP-210ENST00000597965 LMBR1LQ6UX01 489 aa21.54■■□□□ 1.04
PNKP-210ENST00000597965 CNNM1Q9NRU3 951 aa21.54■■□□□ 1.04
PNKP-210ENST00000597965 PDE4DIPQ5VU43 2346 aa21.54■■□□□ 1.04
PNKP-210ENST00000597965 FKTNO75072 461 aa21.53■■□□□ 1.04
PNKP-210ENST00000597965 MKRN3Q13064 507 aaKnown RBP21.53■■□□□ 1.04
PNKP-210ENST00000597965 TNFAIP1Q13829 316 aa21.53■■□□□ 1.04
PNKP-210ENST00000597965 HELBQ8NG08 1087 aaPredicted RBP21.53■■□□□ 1.04
PNKP-210ENST00000597965 IRS2Q9Y4H2 1338 aa21.53■■□□□ 1.04
PNKP-210ENST00000597965 SPDYE2BA6NHP3 402 aa21.52■■□□□ 1.04
PNKP-210ENST00000597965 F6X3S4 739 aa21.52■■□□□ 1.04
PNKP-210ENST00000597965 ALDH1L1O75891 902 aa21.52■■□□□ 1.04
PNKP-210ENST00000597965 SPDYE6P0CI01 402 aa21.52■■□□□ 1.04
PNKP-210ENST00000597965 CFAP100Q494V2 611 aa21.52■■□□□ 1.04
PNKP-210ENST00000597965 FBXO46Q6PJ61 603 aaPredicted RBP21.52■■□□□ 1.04
PNKP-210ENST00000597965 CERS5Q8N5B7 392 aa21.52■■□□□ 1.04
PNKP-210ENST00000597965 SALL2Q9Y467 1007 aaPredicted RBP21.52■■□□□ 1.04
PNKP-210ENST00000597965 IREB2P48200 963 aaKnown RBP21.51■■□□□ 1.03
PNKP-210ENST00000597965 RBM5P52756 815 aaKnown RBP eCLIP21.51■■□□□ 1.03
PNKP-210ENST00000597965 OTUD7BQ6GQQ9 843 aa21.51■■□□□ 1.03
PNKP-210ENST00000597965 F8W031 263 aaPredicted RBP21.5■■□□□ 1.03
PNKP-210ENST00000597965 UBE4AQ14139 1066 aa21.5■■□□□ 1.03
PNKP-210ENST00000597965 SRCIN1Q9C0H9 1055 aa21.5■■□□□ 1.03
PNKP-210ENST00000597965 A0A1B0GUL6 1792 aa21.5■■□□□ 1.03
PNKP-210ENST00000597965 PLIN1O60240 522 aa21.49■■□□□ 1.03
PNKP-210ENST00000597965 VEZTQ9HBM0 779 aa21.49■■□□□ 1.03
PNKP-210ENST00000597965 SNAP23O00161 211 aa21.48■■□□□ 1.03
PNKP-210ENST00000597965 IFNL1Q8IU54 200 aa21.48■■□□□ 1.03
PNKP-210ENST00000597965 SERPINA10Q9UK55 444 aa21.48■■□□□ 1.03
PNKP-210ENST00000597965 FAM205AQ6ZU69 1335 aa21.48■■□□□ 1.03
PNKP-210ENST00000597965 CLRN2A0PK11 232 aa21.47■■□□□ 1.03
PNKP-210ENST00000597965 HIBADHP31937 336 aaKnown RBP21.47■■□□□ 1.03
PNKP-210ENST00000597965 MFSD14BQ5SR56 506 aa21.47■■□□□ 1.03
PNKP-210ENST00000597965 SLC4A10Q6U841 1118 aa21.47■■□□□ 1.03
PNKP-210ENST00000597965 ANKRD13AQ8IZ07 590 aa21.47■■□□□ 1.03
PNKP-210ENST00000597965 PRMT6Q96LA8 375 aaPredicted RBP21.47■■□□□ 1.03
PNKP-210ENST00000597965 TNRC18O15417 2968 aaPredicted RBP21.46■■□□□ 1.03
PNKP-210ENST00000597965 TDRD7Q8NHU6 1098 aaKnown RBP21.46■■□□□ 1.03
PNKP-210ENST00000597965 WNK4Q96J92 1243 aa21.46■■□□□ 1.03
PNKP-210ENST00000597965 ZNF594Q96JF6 807 aaPredicted RBP21.46■■□□□ 1.03
PNKP-210ENST00000597965 MROH5Q6ZUA9 1318 aa21.46■■□□□ 1.03
PNKP-210ENST00000597965 TNNI2P48788 182 aa21.45■■□□□ 1.02
PNKP-210ENST00000597965 RASA3Q14644 834 aa21.45■■□□□ 1.02
PNKP-210ENST00000597965 EPHA10Q5JZY3 1008 aa21.45■■□□□ 1.02
PNKP-210ENST00000597965 VPS37DQ86XT2 251 aa21.45■■□□□ 1.02
PNKP-210ENST00000597965 TTF2Q9UNY4 1162 aaKnown RBP21.45■■□□□ 1.02
PNKP-210ENST00000597965 LAMB1P07942 1786 aa21.45■■□□□ 1.02
PNKP-210ENST00000597965 PRPF38BQ5VTL8 546 aaKnown RBP21.44■■□□□ 1.02
PNKP-210ENST00000597965 SPDYE2Q495Y8 402 aa21.43■■□□□ 1.02
PNKP-210ENST00000597965 CAVIN4Q5BKX8 364 aa21.43■■□□□ 1.02
PNKP-210ENST00000597965 NBPF12Q5TAG4 269 aaPredicted RBP21.43■■□□□ 1.02
PNKP-210ENST00000597965 INTS3Q68E01 1043 aaKnown RBP21.43■■□□□ 1.02
PNKP-210ENST00000597965 TBC1D22AQ8WUA7 517 aa21.43■■□□□ 1.02
PNKP-210ENST00000597965 ERO1AQ96HE7 468 aa21.43■■□□□ 1.02
PNKP-210ENST00000597965 CLMNQ96JQ2 1002 aa21.43■■□□□ 1.02
PNKP-210ENST00000597965 PCDH10Q9P2E7 1040 aa21.43■■□□□ 1.02
PNKP-210ENST00000597965 FZD1Q9UP38 647 aa21.43■■□□□ 1.02
PNKP-210ENST00000597965 SSC5DA1L4H1 1573 aa21.43■■□□□ 1.02
PNKP-210ENST00000597965 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.42■■□□□ 1.02
PNKP-210ENST00000597965 JAG2Q9Y219 1238 aa21.42■■□□□ 1.02
PNKP-210ENST00000597965 PCDHAC2Q9Y5I4 1007 aa21.42■■□□□ 1.02
PNKP-210ENST00000597965 UTYO14607 1347 aa21.41■■□□□ 1.02
PNKP-210ENST00000597965 FRAT2O75474 233 aaPredicted RBP21.41■■□□□ 1.02
PNKP-210ENST00000597965 USP2O75604 605 aaPredicted RBP21.41■■□□□ 1.02
PNKP-210ENST00000597965 GYG1P46976 350 aa21.41■■□□□ 1.02
PNKP-210ENST00000597965 FAM84BQ96KN1 310 aaPredicted RBP21.41■■□□□ 1.02
PNKP-210ENST00000597965 SPINK5Q9NQ38 1064 aaPredicted RBP21.41■■□□□ 1.02
PNKP-210ENST00000597965 ZNF70Q9UC06 446 aaPredicted RBP21.41■■□□□ 1.02
PNKP-210ENST00000597965 TRIM17Q9Y577 477 aa21.41■■□□□ 1.02
PNKP-210ENST00000597965 HDLBPQ00341 1268 aaKnown RBP21.4■■□□□ 1.02
PNKP-210ENST00000597965 ARHGEF6Q15052 776 aa21.4■■□□□ 1.02
PNKP-210ENST00000597965 DZIP1LQ8IYY4 767 aaKnown RBP21.4■■□□□ 1.02
PNKP-210ENST00000597965 R3HDMLQ9H3Y0 253 aa21.4■■□□□ 1.02
PNKP-210ENST00000597965 RIPOR2Q9Y4F9 1068 aa21.4■■□□□ 1.02
PNKP-210ENST00000597965 ARAP2Q8WZ64 1704 aa21.39■■□□□ 1.01
PNKP-210ENST00000597965 IGF2BP3O00425 579 aaKnown RBP eCLIP21.39■■□□□ 1.01
PNKP-210ENST00000597965 WDHD1O75717 1129 aaPredicted RBP21.39■■□□□ 1.01
PNKP-210ENST00000597965 FAM9BQ8IZU0 186 aa21.39■■□□□ 1.01
PNKP-210ENST00000597965 HOOK2Q96ED9 719 aa21.39■■□□□ 1.01
PNKP-210ENST00000597965 SUCLG2Q96I99 432 aa21.39■■□□□ 1.01
PNKP-210ENST00000597965 PTPRCP08575 1304 aa21.38■■□□□ 1.01
PNKP-210ENST00000597965 TESPA1A2RU30 521 aaPredicted RBP21.38■■□□□ 1.01
PNKP-210ENST00000597965 ZNF316A6NFI3 1004 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms