RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 COL13A1Q5TAT6 717 aaPredicted RBP14.61□□□□□ -0.07
SYMPK-207ENST00000596824 TDRD7Q8NHU6 1098 aaKnown RBP14.61□□□□□ -0.07
SYMPK-207ENST00000596824 ZBED3Q96IU2 234 aaPredicted RBP14.61□□□□□ -0.07
SYMPK-207ENST00000596824 FAM84BQ96KN1 310 aaPredicted RBP14.61□□□□□ -0.07
SYMPK-207ENST00000596824 MEIS3Q99687 375 aa14.61□□□□□ -0.07
SYMPK-207ENST00000596824 GBA2Q9HCG7 927 aaPredicted RBP14.61□□□□□ -0.07
SYMPK-207ENST00000596824 HDAC9Q9UKV0 1011 aa14.61□□□□□ -0.07
SYMPK-207ENST00000596824 FAM205AQ6ZU69 1335 aa14.61□□□□□ -0.07
SYMPK-207ENST00000596824 MYH2Q9UKX2 1941 aa14.6□□□□□ -0.07
SYMPK-207ENST00000596824 CASP8AP2Q9UKL3 1982 aa14.6□□□□□ -0.07
SYMPK-207ENST00000596824 EYA2O00167 538 aa14.6□□□□□ -0.07
SYMPK-207ENST00000596824 TRIM27P14373 513 aa14.6□□□□□ -0.07
SYMPK-207ENST00000596824 HIBADHP31937 336 aaKnown RBP14.6□□□□□ -0.07
SYMPK-207ENST00000596824 HUNKP57058 714 aa14.6□□□□□ -0.07
SYMPK-207ENST00000596824 PTPN12Q05209 780 aaKnown RBP14.6□□□□□ -0.07
SYMPK-207ENST00000596824 SCAF8Q9UPN6 1271 aaKnown RBP14.6□□□□□ -0.07
SYMPK-207ENST00000596824 TNNQ9UQP3 1299 aa14.6□□□□□ -0.07
SYMPK-207ENST00000596824 JAG2Q9Y219 1238 aa14.6□□□□□ -0.07
SYMPK-207ENST00000596824 LRRFIP2Q9Y608 721 aaKnown RBP14.6□□□□□ -0.07
SYMPK-207ENST00000596824 COL1A1P02452 1464 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-207ENST00000596824 ZBED9Q6R2W3 1325 aa14.6□□□□□ -0.07
SYMPK-207ENST00000596824 IPO8O15397 1037 aaKnown RBP14.59□□□□□ -0.07
SYMPK-207ENST00000596824 AOC2O75106 756 aa14.59□□□□□ -0.07
SYMPK-207ENST00000596824 ATF7IPQ6VMQ6 1270 aa14.59□□□□□ -0.07
SYMPK-207ENST00000596824 C2orf69Q8N8R5 385 aa14.59□□□□□ -0.07
SYMPK-207ENST00000596824 AIDAQ96BJ3 306 aa14.59□□□□□ -0.07
SYMPK-207ENST00000596824 HDAC5Q9UQL6 1122 aa14.59□□□□□ -0.07
SYMPK-207ENST00000596824 F8W031 263 aaPredicted RBP14.58□□□□□ -0.08
SYMPK-207ENST00000596824 FGFR2P21802 821 aa14.58□□□□□ -0.08
SYMPK-207ENST00000596824 MAP2K2P36507 400 aa14.58□□□□□ -0.08
SYMPK-207ENST00000596824 MAP2K1Q02750 393 aaPredicted RBP14.58□□□□□ -0.08
SYMPK-207ENST00000596824 IFFO2Q5TF58 517 aa14.58□□□□□ -0.08
SYMPK-207ENST00000596824 ATG9AQ7Z3C6 839 aa14.58□□□□□ -0.08
SYMPK-207ENST00000596824 FBXO33Q7Z6M2 555 aa14.58□□□□□ -0.08
SYMPK-207ENST00000596824 MTMR14Q8NCE2 650 aa14.58□□□□□ -0.08
SYMPK-207ENST00000596824 FRAT1Q92837 279 aaPredicted RBP14.58□□□□□ -0.08
SYMPK-207ENST00000596824 AK9Q5TCS8 1911 aa14.58□□□□□ -0.08
SYMPK-207ENST00000596824 CIAO1O76071 339 aa14.57□□□□□ -0.08
SYMPK-207ENST00000596824 PUM3Q15397 648 aaKnown RBP14.57□□□□□ -0.08
SYMPK-207ENST00000596824 DLGAP5Q15398 846 aa14.57□□□□□ -0.08
SYMPK-207ENST00000596824 MFSD14BQ5SR56 506 aa14.57□□□□□ -0.08
SYMPK-207ENST00000596824 RGMBQ6NW40 437 aa14.57□□□□□ -0.08
SYMPK-207ENST00000596824 APOBEC3FQ8IUX4 373 aaKnown RBP14.57□□□□□ -0.08
SYMPK-207ENST00000596824 FBXO3Q9UK99 471 aa14.57□□□□□ -0.08
SYMPK-207ENST00000596824 PCDHAC2Q9Y5I4 1007 aa14.57□□□□□ -0.08
SYMPK-207ENST00000596824 FAM155AB1AL88 458 aaPredicted RBP14.56□□□□□ -0.08
SYMPK-207ENST00000596824 GNAI3P08754 354 aa14.56□□□□□ -0.08
SYMPK-207ENST00000596824 CTCFP49711 727 aaPredicted RBP14.56□□□□□ -0.08
SYMPK-207ENST00000596824 CFAP100Q494V2 611 aa14.56□□□□□ -0.08
SYMPK-207ENST00000596824 CAVIN4Q5BKX8 364 aa14.56□□□□□ -0.08
SYMPK-207ENST00000596824 PRAMEF18Q5VWM3 479 aa14.56□□□□□ -0.08
SYMPK-207ENST00000596824 VPS37DQ86XT2 251 aa14.56□□□□□ -0.08
SYMPK-207ENST00000596824 SIL1Q9H173 461 aa14.56□□□□□ -0.08
SYMPK-207ENST00000596824 IQSEC3Q9UPP2 1182 aaPredicted RBP14.56□□□□□ -0.08
SYMPK-207ENST00000596824 MYO5AQ9Y4I1 1855 aaKnown RBP14.56□□□□□ -0.08
SYMPK-207ENST00000596824 SSC5DA1L4H1 1573 aa14.56□□□□□ -0.08
SYMPK-207ENST00000596824 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
SYMPK-207ENST00000596824 IFIT1P09914 478 aaKnown RBP14.55□□□□□ -0.08
SYMPK-207ENST00000596824 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
SYMPK-207ENST00000596824 HSPA8P11142 646 aaKnown RBP14.55□□□□□ -0.08
SYMPK-207ENST00000596824 FKBP1BP68106 108 aa14.55□□□□□ -0.08
SYMPK-207ENST00000596824 ZKSCAN2Q63HK3 967 aa14.55□□□□□ -0.08
SYMPK-207ENST00000596824 CLUAP1Q96AJ1 413 aa14.55□□□□□ -0.08
SYMPK-207ENST00000596824 COPRSQ9NQ92 184 aa14.55□□□□□ -0.08
SYMPK-207ENST00000596824 PA2G4Q9UQ80 394 aaKnown RBP14.55□□□□□ -0.08
SYMPK-207ENST00000596824 AOX1Q06278 1338 aa14.55□□□□□ -0.08
SYMPK-207ENST00000596824 DOCK2Q92608 1830 aa14.55□□□□□ -0.08
SYMPK-207ENST00000596824 SLC5A1P13866 664 aa14.54□□□□□ -0.08
SYMPK-207ENST00000596824 BCAMP50895 628 aa14.54□□□□□ -0.08
SYMPK-207ENST00000596824 NOGQ13253 232 aa14.54□□□□□ -0.08
SYMPK-207ENST00000596824 MTX1Q13505 466 aa14.54□□□□□ -0.08
SYMPK-207ENST00000596824 LPIN2Q92539 896 aa14.54□□□□□ -0.08
SYMPK-207ENST00000596824 PRMT6Q96LA8 375 aaPredicted RBP14.54□□□□□ -0.08
SYMPK-207ENST00000596824 ZIC5Q96T25 663 aa14.54□□□□□ -0.08
SYMPK-207ENST00000596824 PRDM10Q9NQV6 1147 aa14.54□□□□□ -0.08
SYMPK-207ENST00000596824 TTF2Q9UNY4 1162 aaKnown RBP14.54□□□□□ -0.08
SYMPK-207ENST00000596824 SLC10A3P09131 477 aa14.53□□□□□ -0.08
SYMPK-207ENST00000596824 IL15P40933 162 aaPredicted RBP14.53□□□□□ -0.08
SYMPK-207ENST00000596824 ZNF157P51786 506 aaPredicted RBP14.53□□□□□ -0.08
SYMPK-207ENST00000596824 LBX1P52954 281 aa14.53□□□□□ -0.08
SYMPK-207ENST00000596824 CHAF1AQ13111 956 aaPredicted RBP14.53□□□□□ -0.08
SYMPK-207ENST00000596824 GRIK5Q16478 980 aa14.53□□□□□ -0.08
SYMPK-207ENST00000596824 MOB2Q70IA6 237 aa14.53□□□□□ -0.08
SYMPK-207ENST00000596824 TMEM57Q8N5G2 664 aa14.53□□□□□ -0.08
SYMPK-207ENST00000596824 CCDC102AQ96A19 550 aa14.53□□□□□ -0.08
SYMPK-207ENST00000596824 SERPINA10Q9UK55 444 aa14.53□□□□□ -0.08
SYMPK-207ENST00000596824 CDK5RAP2Q96SN8 1893 aa14.52□□□□□ -0.08
SYMPK-207ENST00000596824 MAST2Q6P0Q8 1798 aa14.52□□□□□ -0.08
SYMPK-207ENST00000596824 CLRN2A0PK11 232 aa14.52□□□□□ -0.09
SYMPK-207ENST00000596824 SRGAP3O43295 1099 aa14.52□□□□□ -0.09
SYMPK-207ENST00000596824 MYO1BO43795 1136 aa14.52□□□□□ -0.09
SYMPK-207ENST00000596824 FRAT2O75474 233 aaPredicted RBP14.52□□□□□ -0.09
SYMPK-207ENST00000596824 NF2P35240 595 aa14.52□□□□□ -0.09
SYMPK-207ENST00000596824 RBM5P52756 815 aaKnown RBP eCLIP14.52□□□□□ -0.09
SYMPK-207ENST00000596824 ATP2B3Q16720 1220 aa14.52□□□□□ -0.09
SYMPK-207ENST00000596824 RASAL3Q86YV0 1011 aa14.52□□□□□ -0.09
SYMPK-207ENST00000596824 TNS4Q8IZW8 715 aa14.52□□□□□ -0.09
SYMPK-207ENST00000596824 TBC1D22AQ8WUA7 517 aa14.52□□□□□ -0.09
SYMPK-207ENST00000596824 BEGAINQ9BUH8 593 aa14.52□□□□□ -0.09
SYMPK-207ENST00000596824 CEP126Q9P2H0 1117 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms