RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 SEMA3EO15041 775 aa18.32■□□□□ 0.52
DDX49-204ENST00000595858 UQCRFS1P1P0C7P4 283 aa18.32■□□□□ 0.52
DDX49-204ENST00000595858 ARID4AP29374 1257 aaPredicted RBP18.32■□□□□ 0.52
DDX49-204ENST00000595858 TTC39AQ5SRH9 613 aa18.32■□□□□ 0.52
DDX49-204ENST00000595858 DACT2Q5SW24 774 aa18.32■□□□□ 0.52
DDX49-204ENST00000595858 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
DDX49-204ENST00000595858 LNPKQ9C0E8 428 aa18.32■□□□□ 0.52
DDX49-204ENST00000595858 CHAF1AQ13111 956 aaPredicted RBP18.31■□□□□ 0.52
DDX49-204ENST00000595858 RASGRF1Q13972 1273 aa18.31■□□□□ 0.52
DDX49-204ENST00000595858 ZNF512BQ96KM6 892 aaPredicted RBP18.31■□□□□ 0.52
DDX49-204ENST00000595858 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
DDX49-204ENST00000595858 JAG2Q9Y219 1238 aa18.31■□□□□ 0.52
DDX49-204ENST00000595858 KDM2BQ8NHM5 1336 aa18.31■□□□□ 0.52
DDX49-204ENST00000595858 RSBN1LQ6PCB5 846 aaPredicted RBP18.31■□□□□ 0.52
DDX49-204ENST00000595858 MXD3Q9BW11 206 aa18.31■□□□□ 0.52
DDX49-204ENST00000595858 ZBTB12Q9Y330 459 aaPredicted RBP18.31■□□□□ 0.52
DDX49-204ENST00000595858 SCARF1Q14162 830 aa18.3■□□□□ 0.52
DDX49-204ENST00000595858 CENPQQ7L2Z9 268 aaPredicted RBP18.3■□□□□ 0.52
DDX49-204ENST00000595858 HMG20BQ9P0W2 317 aa18.3■□□□□ 0.52
DDX49-204ENST00000595858 YY1P25490 414 aa18.29■□□□□ 0.52
DDX49-204ENST00000595858 MCAMP43121 646 aa18.29■□□□□ 0.52
DDX49-204ENST00000595858 OTUD7AQ8TE49 926 aaPredicted RBP18.29■□□□□ 0.52
DDX49-204ENST00000595858 COL1A1P02452 1464 aaPredicted RBP18.29■□□□□ 0.52
DDX49-204ENST00000595858 GMPSP49915 693 aaPredicted RBP18.29■□□□□ 0.52
DDX49-204ENST00000595858 CERS5Q8N5B7 392 aa18.29■□□□□ 0.52
DDX49-204ENST00000595858 SPATA5Q8NB90 893 aa18.29■□□□□ 0.52
DDX49-204ENST00000595858 AGBL3Q8NEM8 1001 aa18.29■□□□□ 0.52
DDX49-204ENST00000595858 WDR66Q8TBY9 1149 aa18.29■□□□□ 0.52
DDX49-204ENST00000595858 GMLQ99445 158 aa18.29■□□□□ 0.52
DDX49-204ENST00000595858 RPS12P25398 132 aaKnown RBP18.28■□□□□ 0.52
DDX49-204ENST00000595858 FKBP1AP62942 108 aaKnown RBP18.28■□□□□ 0.52
DDX49-204ENST00000595858 MFSD14BQ5SR56 506 aa18.28■□□□□ 0.52
DDX49-204ENST00000595858 PI16Q6UXB8 463 aa18.28■□□□□ 0.52
DDX49-204ENST00000595858 TBC1D22AQ8WUA7 517 aa18.28■□□□□ 0.52
DDX49-204ENST00000595858 L3MBTL3Q96JM7 780 aaPredicted RBP18.28■□□□□ 0.52
DDX49-204ENST00000595858 SNRKQ9NRH2 765 aa18.28■□□□□ 0.52
DDX49-204ENST00000595858 ECHDC1Q9NTX5 307 aa18.28■□□□□ 0.52
DDX49-204ENST00000595858 PDS5AQ29RF7 1337 aaKnown RBP18.28■□□□□ 0.52
DDX49-204ENST00000595858 ATP5JP18859 108 aa18.27■□□□□ 0.52
DDX49-204ENST00000595858 DPF2Q92785 391 aa18.27■□□□□ 0.52
DDX49-204ENST00000595858 PSME4Q14997 1843 aa18.27■□□□□ 0.52
DDX49-204ENST00000595858 MYO3BQ8WXR4 1341 aa18.27■□□□□ 0.52
DDX49-204ENST00000595858 SALL3Q9BXA9 1300 aa18.27■□□□□ 0.52
DDX49-204ENST00000595858 SCNN1DP51172 638 aa18.26■□□□□ 0.51
DDX49-204ENST00000595858 ZNF526Q8TF50 670 aaPredicted RBP18.26■□□□□ 0.51
DDX49-204ENST00000595858 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.26■□□□□ 0.51
DDX49-204ENST00000595858 GPATCH3Q96I76 525 aa18.26■□□□□ 0.51
DDX49-204ENST00000595858 MX1P20591 662 aa18.26■□□□□ 0.51
DDX49-204ENST00000595858 ZAP70P43403 619 aa18.25■□□□□ 0.51
DDX49-204ENST00000595858 TSHZ3Q63HK5 1081 aa18.25■□□□□ 0.51
DDX49-204ENST00000595858 BOLA2Q9H3K6 86 aa18.25■□□□□ 0.51
DDX49-204ENST00000595858 GPRC5DQ9NZD1 345 aa18.25■□□□□ 0.51
DDX49-204ENST00000595858 CNOT7Q9UIV1 285 aaKnown RBP18.25■□□□□ 0.51
DDX49-204ENST00000595858 TTC41PQ6P2S7 1318 aa18.25■□□□□ 0.51
DDX49-204ENST00000595858 SALL1Q9NSC2 1324 aa18.25■□□□□ 0.51
DDX49-204ENST00000595858 ZNF646O15015 1829 aaPredicted RBP18.25■□□□□ 0.51
DDX49-204ENST00000595858 POTECB2RU33 542 aa18.24■□□□□ 0.51
DDX49-204ENST00000595858 KIAA0825Q8IV33 1275 aa18.24■□□□□ 0.51
DDX49-204ENST00000595858 STAP2Q9UGK3 403 aa18.24■□□□□ 0.51
DDX49-204ENST00000595858 CYP2E1P05181 493 aaPredicted RBP18.24■□□□□ 0.51
DDX49-204ENST00000595858 EPS15P42566 896 aa18.24■□□□□ 0.51
DDX49-204ENST00000595858 PDE1AP54750 535 aa18.24■□□□□ 0.51
DDX49-204ENST00000595858 GRIK5Q16478 980 aa18.24■□□□□ 0.51
DDX49-204ENST00000595858 TBC1D9Q6ZT07 1266 aa18.24■□□□□ 0.51
DDX49-204ENST00000595858 SUGT1Q9Y2Z0 365 aa18.24■□□□□ 0.51
DDX49-204ENST00000595858 NDUFB9Q9Y6M9 179 aa18.24■□□□□ 0.51
DDX49-204ENST00000595858 AKAP11Q9UKA4 1901 aa18.24■□□□□ 0.51
DDX49-204ENST00000595858 MYH13Q9UKX3 1938 aa18.23■□□□□ 0.51
DDX49-204ENST00000595858 SHTN1A0MZ66 631 aa18.23■□□□□ 0.51
DDX49-204ENST00000595858 F8W031 263 aaPredicted RBP18.23■□□□□ 0.51
DDX49-204ENST00000595858 USP17L8P0C7I0 530 aa18.23■□□□□ 0.51
DDX49-204ENST00000595858 LMOD1P29536 600 aaPredicted RBP18.23■□□□□ 0.51
DDX49-204ENST00000595858 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
DDX49-204ENST00000595858 MICALL2Q8IY33 904 aa18.23■□□□□ 0.51
DDX49-204ENST00000595858 ZGPATQ8N5A5 531 aaKnown RBP18.23■□□□□ 0.51
DDX49-204ENST00000595858 RRAGCQ9HB90 399 aa18.23■□□□□ 0.51
DDX49-204ENST00000595858 ABCF2Q9UG63 623 aa18.23■□□□□ 0.51
DDX49-204ENST00000595858 H7C1D1 291 aa18.22■□□□□ 0.51
DDX49-204ENST00000595858 ERC2O15083 957 aa18.22■□□□□ 0.51
DDX49-204ENST00000595858 VEGFAP15692 232 aaPredicted RBP18.22■□□□□ 0.51
DDX49-204ENST00000595858 PDE4AP27815 886 aa18.22■□□□□ 0.51
DDX49-204ENST00000595858 PRDX5P30044 214 aa18.22■□□□□ 0.51
DDX49-204ENST00000595858 PI4K2BQ8TCG2 481 aa18.22■□□□□ 0.51
DDX49-204ENST00000595858 HAUS7Q99871 368 aa18.22■□□□□ 0.51
DDX49-204ENST00000595858 NMRK2Q9NPI5 230 aa18.22■□□□□ 0.51
DDX49-204ENST00000595858 HACL1Q9UJ83 578 aa18.22■□□□□ 0.51
DDX49-204ENST00000595858 IQCA1LA6NCM1 817 aa18.22■□□□□ 0.51
DDX49-204ENST00000595858 GLRX3O76003 335 aaKnown RBP18.22■□□□□ 0.51
DDX49-204ENST00000595858 OGFOD1Q8N543 542 aa18.22■□□□□ 0.51
DDX49-204ENST00000595858 DNAJC2Q99543 621 aaKnown RBP18.22■□□□□ 0.51
DDX49-204ENST00000595858 GPBP1L1Q9HC44 474 aaPredicted RBP18.22■□□□□ 0.51
DDX49-204ENST00000595858 TTF2Q9UNY4 1162 aaKnown RBP18.22■□□□□ 0.51
DDX49-204ENST00000595858 WDR90Q96KV7 1748 aa18.21■□□□□ 0.51
DDX49-204ENST00000595858 LDHBP07195 334 aaKnown RBP18.21■□□□□ 0.51
DDX49-204ENST00000595858 ZNF280AP59817 542 aaPredicted RBP18.21■□□□□ 0.51
DDX49-204ENST00000595858 SPTY2D1Q68D10 685 aaPredicted RBP18.21■□□□□ 0.51
DDX49-204ENST00000595858 ANTXR1Q9H6X2 564 aa18.21■□□□□ 0.51
DDX49-204ENST00000595858 MMP14P50281 582 aa18.2■□□□□ 0.5
DDX49-204ENST00000595858 ZNF784Q8NCA9 323 aaPredicted RBP18.2■□□□□ 0.5
DDX49-204ENST00000595858 OSBPL3Q9H4L5 887 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms