RNA–Protein interactions for RNA: ENST00000595700.5

SMG9-203, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 1,401 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-203ENST00000595700 VGLL2Q8N8G2 317 aa18.48■□□□□ 0.55
SMG9-203ENST00000595700 FRAT1Q92837 279 aaPredicted RBP18.48■□□□□ 0.55
SMG9-203ENST00000595700 AIDAQ96BJ3 306 aa18.48■□□□□ 0.55
SMG9-203ENST00000595700 FAM84BQ96KN1 310 aaPredicted RBP18.48■□□□□ 0.55
SMG9-203ENST00000595700 LRRFIP2Q9Y608 721 aaKnown RBP18.48■□□□□ 0.55
SMG9-203ENST00000595700 PAPPA2Q9BXP8 1791 aa18.47■□□□□ 0.55
SMG9-203ENST00000595700 PTPN12Q05209 780 aaKnown RBP18.47■□□□□ 0.55
SMG9-203ENST00000595700 C2orf69Q8N8R5 385 aa18.47■□□□□ 0.55
SMG9-203ENST00000595700 HHIPL1Q96JK4 782 aa18.47■□□□□ 0.55
SMG9-203ENST00000595700 WBP1LQ9NX94 342 aa18.47■□□□□ 0.55
SMG9-203ENST00000595700 PDE8BO95263 885 aa18.46■□□□□ 0.55
SMG9-203ENST00000595700 TRIM27P14373 513 aa18.46■□□□□ 0.55
SMG9-203ENST00000595700 MMP14P50281 582 aa18.46■□□□□ 0.55
SMG9-203ENST00000595700 INTS3Q68E01 1043 aaKnown RBP18.46■□□□□ 0.55
SMG9-203ENST00000595700 TDRD7Q8NHU6 1098 aaKnown RBP18.46■□□□□ 0.55
SMG9-203ENST00000595700 PCDHAC2Q9Y5I4 1007 aa18.46■□□□□ 0.55
SMG9-203ENST00000595700 EYA2O00167 538 aa18.45■□□□□ 0.54
SMG9-203ENST00000595700 FKBP1AP62942 108 aaKnown RBP18.45■□□□□ 0.54
SMG9-203ENST00000595700 ATF7IPQ6VMQ6 1270 aa18.45■□□□□ 0.54
SMG9-203ENST00000595700 ZBED3Q96IU2 234 aaPredicted RBP18.45■□□□□ 0.54
SMG9-203ENST00000595700 SIL1Q9H173 461 aa18.45■□□□□ 0.54
SMG9-203ENST00000595700 IQSEC3Q9UPP2 1182 aaPredicted RBP18.45■□□□□ 0.54
SMG9-203ENST00000595700 ZBED9Q6R2W3 1325 aa18.44■□□□□ 0.54
SMG9-203ENST00000595700 FAM205AQ6ZU69 1335 aa18.44■□□□□ 0.54
SMG9-203ENST00000595700 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
SMG9-203ENST00000595700 MAP2K1Q02750 393 aaPredicted RBP18.44■□□□□ 0.54
SMG9-203ENST00000595700 IFFO2Q5TF58 517 aa18.44■□□□□ 0.54
SMG9-203ENST00000595700 PRAMEF18Q5VWM3 479 aa18.44■□□□□ 0.54
SMG9-203ENST00000595700 VPS37DQ86XT2 251 aa18.44■□□□□ 0.54
SMG9-203ENST00000595700 CLUAP1Q96AJ1 413 aa18.44■□□□□ 0.54
SMG9-203ENST00000595700 PUM3Q15397 648 aaKnown RBP18.43■□□□□ 0.54
SMG9-203ENST00000595700 DLGAP5Q15398 846 aa18.43■□□□□ 0.54
SMG9-203ENST00000595700 CFAP100Q494V2 611 aa18.43■□□□□ 0.54
SMG9-203ENST00000595700 MFSD14BQ5SR56 506 aa18.43■□□□□ 0.54
SMG9-203ENST00000595700 ATG9AQ7Z3C6 839 aa18.43■□□□□ 0.54
SMG9-203ENST00000595700 FBXO33Q7Z6M2 555 aa18.43■□□□□ 0.54
SMG9-203ENST00000595700 FGFR2P21802 821 aa18.42■□□□□ 0.54
SMG9-203ENST00000595700 CTCFP49711 727 aaPredicted RBP18.42■□□□□ 0.54
SMG9-203ENST00000595700 CHAF1AQ13111 956 aaPredicted RBP18.42■□□□□ 0.54
SMG9-203ENST00000595700 CAVIN4Q5BKX8 364 aa18.42■□□□□ 0.54
SMG9-203ENST00000595700 RGMBQ6NW40 437 aa18.42■□□□□ 0.54
SMG9-203ENST00000595700 APOBEC3FQ8IUX4 373 aaKnown RBP18.42■□□□□ 0.54
SMG9-203ENST00000595700 PA2G4Q9UQ80 394 aaKnown RBP18.42■□□□□ 0.54
SMG9-203ENST00000595700 HDAC5Q9UQL6 1122 aa18.42■□□□□ 0.54
SMG9-203ENST00000595700 GNAI3P08754 354 aa18.41■□□□□ 0.54
SMG9-203ENST00000595700 MAP2K2P36507 400 aa18.41■□□□□ 0.54
SMG9-203ENST00000595700 MTMR14Q8NCE2 650 aa18.41■□□□□ 0.54
SMG9-203ENST00000595700 AOX1Q06278 1338 aa18.41■□□□□ 0.54
SMG9-203ENST00000595700 FRAT2O75474 233 aaPredicted RBP18.4■□□□□ 0.54
SMG9-203ENST00000595700 IFIT1P09914 478 aaKnown RBP18.4■□□□□ 0.54
SMG9-203ENST00000595700 BCAMP50895 628 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 RBM5P52756 815 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMG9-203ENST00000595700 ZKSCAN2Q63HK3 967 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 MOB2Q70IA6 237 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 ZIC5Q96T25 663 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 TTF2Q9UNY4 1162 aaKnown RBP18.4■□□□□ 0.54
SMG9-203ENST00000595700 COL1A1P02452 1464 aaPredicted RBP18.4■□□□□ 0.54
SMG9-203ENST00000595700 CLRN2A0PK11 232 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 SPDYE2BA6NHP3 402 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 FAM155AB1AL88 458 aaPredicted RBP18.4■□□□□ 0.54
SMG9-203ENST00000595700 CIAO1O76071 339 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 SPDYE6P0CI01 402 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 HSPA8P11142 646 aaKnown RBP18.4■□□□□ 0.54
SMG9-203ENST00000595700 SLC5A1P13866 664 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 ZNF157P51786 506 aaPredicted RBP18.4■□□□□ 0.54
SMG9-203ENST00000595700 LBX1P52954 281 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 TNS4Q8IZW8 715 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 TMEM57Q8N5G2 664 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 BEGAINQ9BUH8 593 aa18.4■□□□□ 0.54
SMG9-203ENST00000595700 NOGQ13253 232 aa18.39■□□□□ 0.53
SMG9-203ENST00000595700 TTLL12Q14166 644 aaPredicted RBP18.39■□□□□ 0.53
SMG9-203ENST00000595700 GRIK5Q16478 980 aa18.39■□□□□ 0.53
SMG9-203ENST00000595700 LPIN2Q92539 896 aa18.39■□□□□ 0.53
SMG9-203ENST00000595700 PRMT6Q96LA8 375 aaPredicted RBP18.39■□□□□ 0.53
SMG9-203ENST00000595700 FBXO3Q9UK99 471 aa18.39■□□□□ 0.53
SMG9-203ENST00000595700 MYO1BO43795 1136 aa18.38■□□□□ 0.53
SMG9-203ENST00000595700 NF2P35240 595 aa18.38■□□□□ 0.53
SMG9-203ENST00000595700 FKBP1BP68106 108 aa18.38■□□□□ 0.53
SMG9-203ENST00000595700 ATP2B3Q16720 1220 aa18.38■□□□□ 0.53
SMG9-203ENST00000595700 VEZTQ9HBM0 779 aa18.38■□□□□ 0.53
SMG9-203ENST00000595700 COPRSQ9NQ92 184 aa18.38■□□□□ 0.53
SMG9-203ENST00000595700 PRDM10Q9NQV6 1147 aa18.38■□□□□ 0.53
SMG9-203ENST00000595700 TSKSQ9UJT2 592 aa18.38■□□□□ 0.53
SMG9-203ENST00000595700 SRGAP3O43295 1099 aa18.37■□□□□ 0.53
SMG9-203ENST00000595700 SLC10A3P09131 477 aa18.37■□□□□ 0.53
SMG9-203ENST00000595700 IL15P40933 162 aaPredicted RBP18.37■□□□□ 0.53
SMG9-203ENST00000595700 CCDC102AQ96A19 550 aa18.37■□□□□ 0.53
SMG9-203ENST00000595700 CEP126Q9P2H0 1117 aa18.37■□□□□ 0.53
SMG9-203ENST00000595700 SSC5DA1L4H1 1573 aa18.36■□□□□ 0.53
SMG9-203ENST00000595700 UBE2Q2LH0YL09 131 aa18.36■□□□□ 0.53
SMG9-203ENST00000595700 GNAI2P04899 355 aa18.36■□□□□ 0.53
SMG9-203ENST00000595700 PRKG1Q13976 671 aa18.36■□□□□ 0.53
SMG9-203ENST00000595700 RASAL3Q86YV0 1011 aa18.36■□□□□ 0.53
SMG9-203ENST00000595700 TBC1D22AQ8WUA7 517 aa18.36■□□□□ 0.53
SMG9-203ENST00000595700 DEFB129Q9H1M3 183 aa18.36■□□□□ 0.53
SMG9-203ENST00000595700 SERPINA10Q9UK55 444 aa18.36■□□□□ 0.53
SMG9-203ENST00000595700 AKAP11Q9UKA4 1901 aa18.35■□□□□ 0.53
SMG9-203ENST00000595700 CRKP46108 304 aa18.35■□□□□ 0.53
SMG9-203ENST00000595700 KIF23Q02241 960 aaPredicted RBP18.35■□□□□ 0.53
SMG9-203ENST00000595700 MTX1Q13505 466 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms