RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 TDRD7Q8NHU6 1098 aaKnown RBP22.11■■□□□ 1.13
SHKBP1-204ENST00000594862 MXD3Q9BW11 206 aa22.11■■□□□ 1.13
SHKBP1-204ENST00000594862 GYG1P46976 350 aa22.1■■□□□ 1.13
SHKBP1-204ENST00000594862 SAPCD2Q86UD0 394 aa22.1■■□□□ 1.13
SHKBP1-204ENST00000594862 KLHDC4Q8TBB5 520 aa22.1■■□□□ 1.13
SHKBP1-204ENST00000594862 FAM84BQ96KN1 310 aaPredicted RBP22.1■■□□□ 1.13
SHKBP1-204ENST00000594862 WDR33Q9C0J8 1336 aaKnown RBP22.09■■□□□ 1.13
SHKBP1-204ENST00000594862 ADM5C9JUS6 153 aa22.09■■□□□ 1.13
SHKBP1-204ENST00000594862 SLC5A1P13866 664 aa22.09■■□□□ 1.13
SHKBP1-204ENST00000594862 MTX1Q13505 466 aa22.09■■□□□ 1.13
SHKBP1-204ENST00000594862 PAXIP1Q6ZW49 1069 aaPredicted RBP22.09■■□□□ 1.13
SHKBP1-204ENST00000594862 FTSJ3Q8IY81 847 aaKnown RBP22.09■■□□□ 1.13
SHKBP1-204ENST00000594862 C2orf69Q8N8R5 385 aa22.09■■□□□ 1.13
SHKBP1-204ENST00000594862 POLR2AP24928 1970 aaKnown RBP22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 WNT10BO00744 389 aa22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 FOXN1O15353 648 aa22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 GNAI2P04899 355 aa22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 IL15P40933 162 aaPredicted RBP22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 FBXO33Q7Z6M2 555 aa22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 APOBEC3FQ8IUX4 373 aaKnown RBP22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 MTMR14Q8NCE2 650 aa22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 TBC1D22AQ8WUA7 517 aa22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 LPIN2Q92539 896 aa22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 CAPNS2Q96L46 248 aa22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 GBA2Q9HCG7 927 aaPredicted RBP22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 COPRSQ9NQ92 184 aa22.08■■□□□ 1.13
SHKBP1-204ENST00000594862 COL1A1P02452 1464 aaPredicted RBP22.08■■□□□ 1.12
SHKBP1-204ENST00000594862 FKBP1BP68106 108 aa22.07■■□□□ 1.12
SHKBP1-204ENST00000594862 DLGAP5Q15398 846 aa22.07■■□□□ 1.12
SHKBP1-204ENST00000594862 CERS5Q8N5B7 392 aa22.07■■□□□ 1.12
SHKBP1-204ENST00000594862 CLUAP1Q96AJ1 413 aa22.07■■□□□ 1.12
SHKBP1-204ENST00000594862 CDCA5Q96FF9 252 aa22.07■■□□□ 1.12
SHKBP1-204ENST00000594862 CEP126Q9P2H0 1117 aa22.07■■□□□ 1.12
SHKBP1-204ENST00000594862 ECM29Q5VYK3 1845 aa22.07■■□□□ 1.12
SHKBP1-204ENST00000594862 ASTN2O75129 1339 aaPredicted RBP22.06■■□□□ 1.12
SHKBP1-204ENST00000594862 MYO1BO43795 1136 aa22.06■■□□□ 1.12
SHKBP1-204ENST00000594862 FRAT2O75474 233 aaPredicted RBP22.06■■□□□ 1.12
SHKBP1-204ENST00000594862 FGFR2P21802 821 aa22.06■■□□□ 1.12
SHKBP1-204ENST00000594862 MAP2K1Q02750 393 aaPredicted RBP22.06■■□□□ 1.12
SHKBP1-204ENST00000594862 NBPF9Q3BBW0 867 aa22.06■■□□□ 1.12
SHKBP1-204ENST00000594862 MFSD14BQ5SR56 506 aa22.06■■□□□ 1.12
SHKBP1-204ENST00000594862 ATG9AQ7Z3C6 839 aa22.06■■□□□ 1.12
SHKBP1-204ENST00000594862 AIDAQ96BJ3 306 aa22.06■■□□□ 1.12
SHKBP1-204ENST00000594862 PAPPA2Q9BXP8 1791 aa22.05■■□□□ 1.12
SHKBP1-204ENST00000594862 SRGAP3O43295 1099 aa22.05■■□□□ 1.12
SHKBP1-204ENST00000594862 DZIP1LQ8IYY4 767 aaKnown RBP22.05■■□□□ 1.12
SHKBP1-204ENST00000594862 ZBED3Q96IU2 234 aaPredicted RBP22.05■■□□□ 1.12
SHKBP1-204ENST00000594862 SIL1Q9H173 461 aa22.05■■□□□ 1.12
SHKBP1-204ENST00000594862 MS4A1P11836 297 aa22.04■■□□□ 1.12
SHKBP1-204ENST00000594862 NF2P35240 595 aa22.04■■□□□ 1.12
SHKBP1-204ENST00000594862 MAP2K2P36507 400 aa22.04■■□□□ 1.12
SHKBP1-204ENST00000594862 HUNKP57058 714 aa22.04■■□□□ 1.12
SHKBP1-204ENST00000594862 TMEM57Q8N5G2 664 aa22.04■■□□□ 1.12
SHKBP1-204ENST00000594862 ATP2B3Q16720 1220 aa22.03■■□□□ 1.12
SHKBP1-204ENST00000594862 CYP4F22Q6NT55 531 aa22.03■■□□□ 1.12
SHKBP1-204ENST00000594862 GNL3LQ9NVN8 582 aaKnown RBP22.03■■□□□ 1.12
SHKBP1-204ENST00000594862 SERPINA10Q9UK55 444 aa22.03■■□□□ 1.12
SHKBP1-204ENST00000594862 MYH13Q9UKX3 1938 aa22.03■■□□□ 1.12
SHKBP1-204ENST00000594862 F8W031 263 aaPredicted RBP22.02■■□□□ 1.12
SHKBP1-204ENST00000594862 PRDM10Q9NQV6 1147 aa22.02■■□□□ 1.12
SHKBP1-204ENST00000594862 SUGT1Q9Y2Z0 365 aa22.02■■□□□ 1.12
SHKBP1-204ENST00000594862 PPP2R3BQ9Y5P8 575 aa22.02■■□□□ 1.12
SHKBP1-204ENST00000594862 MAST3O60307 1309 aa22.02■■□□□ 1.12
SHKBP1-204ENST00000594862 SPDYE2BA6NHP3 402 aa22.01■■□□□ 1.11
SHKBP1-204ENST00000594862 SPDYE6P0CI01 402 aa22.01■■□□□ 1.11
SHKBP1-204ENST00000594862 NOGQ13253 232 aa22.01■■□□□ 1.11
SHKBP1-204ENST00000594862 CFAP100Q494V2 611 aa22.01■■□□□ 1.11
SHKBP1-204ENST00000594862 WBP1LQ9NX94 342 aa22.01■■□□□ 1.11
SHKBP1-204ENST00000594862 TTF2Q9UNY4 1162 aaKnown RBP22.01■■□□□ 1.11
SHKBP1-204ENST00000594862 TNNQ9UQP3 1299 aa22.01■■□□□ 1.11
SHKBP1-204ENST00000594862 JAG2Q9Y219 1238 aa22.01■■□□□ 1.11
SHKBP1-204ENST00000594862 ZBTB22O15209 634 aa22■■□□□ 1.11
SHKBP1-204ENST00000594862 BCAMP50895 628 aa22■■□□□ 1.11
SHKBP1-204ENST00000594862 RBM5P52756 815 aaKnown RBP eCLIP22■■□□□ 1.11
SHKBP1-204ENST00000594862 HDLBPQ00341 1268 aaKnown RBP22■■□□□ 1.11
SHKBP1-204ENST00000594862 GRM1Q13255 1194 aa22■■□□□ 1.11
SHKBP1-204ENST00000594862 CCDC102AQ96A19 550 aa22■■□□□ 1.11
SHKBP1-204ENST00000594862 BEGAINQ9BUH8 593 aa22■■□□□ 1.11
SHKBP1-204ENST00000594862 AKAP2Q9Y2D5 859 aa22■■□□□ 1.11
SHKBP1-204ENST00000594862 SEMA3EO15041 775 aa21.99■■□□□ 1.11
SHKBP1-204ENST00000594862 CTCFP49711 727 aaPredicted RBP21.99■■□□□ 1.11
SHKBP1-204ENST00000594862 CHAF1AQ13111 956 aaPredicted RBP21.99■■□□□ 1.11
SHKBP1-204ENST00000594862 RGMBQ6NW40 437 aa21.99■■□□□ 1.11
SHKBP1-204ENST00000594862 ITPRIPQ8IWB1 547 aa21.99■■□□□ 1.11
SHKBP1-204ENST00000594862 WDR66Q8TBY9 1149 aa21.99■■□□□ 1.11
SHKBP1-204ENST00000594862 PA2G4Q9UQ80 394 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-204ENST00000594862 TNFAIP1Q13829 316 aa21.98■■□□□ 1.11
SHKBP1-204ENST00000594862 DLK2Q6UY11 383 aa21.98■■□□□ 1.11
SHKBP1-204ENST00000594862 IQSEC3Q9UPP2 1182 aaPredicted RBP21.98■■□□□ 1.11
SHKBP1-204ENST00000594862 CA12O43570 354 aa21.96■■□□□ 1.11
SHKBP1-204ENST00000594862 TEKT1Q969V4 418 aa21.96■■□□□ 1.11
SHKBP1-204ENST00000594862 MRIQ9BWK5 157 aa21.96■■□□□ 1.11
SHKBP1-204ENST00000594862 CRKP46108 304 aa21.95■■□□□ 1.1
SHKBP1-204ENST00000594862 ZNF157P51786 506 aaPredicted RBP21.95■■□□□ 1.1
SHKBP1-204ENST00000594862 G3BP1Q13283 466 aaKnown RBP eCLIP21.95■■□□□ 1.1
SHKBP1-204ENST00000594862 PRMT6Q96LA8 375 aaPredicted RBP21.95■■□□□ 1.1
SHKBP1-204ENST00000594862 DEFB129Q9H1M3 183 aa21.95■■□□□ 1.1
SHKBP1-204ENST00000594862 DENND2AQ9ULE3 1009 aa21.95■■□□□ 1.1
SHKBP1-204ENST00000594862 LBX1P52954 281 aa21.94■■□□□ 1.1
SHKBP1-204ENST00000594862 TTLL12Q14166 644 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms