RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 POLR2AP24928 1970 aaKnown RBP18.41■□□□□ 0.54
USE1-205ENST00000594724 PAXIP1Q6ZW49 1069 aaPredicted RBP18.41■□□□□ 0.54
USE1-205ENST00000594724 VPS37DQ86XT2 251 aa18.41■□□□□ 0.54
USE1-205ENST00000594724 WNT10BO00744 389 aa18.4■□□□□ 0.54
USE1-205ENST00000594724 FGFR2P21802 821 aa18.4■□□□□ 0.54
USE1-205ENST00000594724 BCAMP50895 628 aa18.4■□□□□ 0.54
USE1-205ENST00000594724 GRM1Q13255 1194 aa18.4■□□□□ 0.54
USE1-205ENST00000594724 CAVIN4Q5BKX8 364 aa18.4■□□□□ 0.54
USE1-205ENST00000594724 SAPCD2Q86UD0 394 aa18.4■□□□□ 0.54
USE1-205ENST00000594724 IFIT1P09914 478 aaKnown RBP18.39■□□□□ 0.53
USE1-205ENST00000594724 HSPA1AP0DMV8 641 aaKnown RBP18.39■□□□□ 0.53
USE1-205ENST00000594724 HSPA1BP0DMV9 641 aaKnown RBP18.39■□□□□ 0.53
USE1-205ENST00000594724 MMP14P50281 582 aa18.39■□□□□ 0.53
USE1-205ENST00000594724 PUM3Q15397 648 aaKnown RBP18.39■□□□□ 0.53
USE1-205ENST00000594724 CYP4F22Q6NT55 531 aa18.39■□□□□ 0.53
USE1-205ENST00000594724 PCDHAC2Q9Y5I4 1007 aa18.39■□□□□ 0.53
USE1-205ENST00000594724 FAM205AQ6ZU69 1335 aa18.39■□□□□ 0.53
USE1-205ENST00000594724 WDR33Q9C0J8 1336 aaKnown RBP18.39■□□□□ 0.53
USE1-205ENST00000594724 PCNTO95613 3336 aa18.38■□□□□ 0.53
USE1-205ENST00000594724 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
USE1-205ENST00000594724 CIAO1O76071 339 aa18.38■□□□□ 0.53
USE1-205ENST00000594724 GNAI2P04899 355 aa18.38■□□□□ 0.53
USE1-205ENST00000594724 RLBP1P12271 317 aa18.38■□□□□ 0.53
USE1-205ENST00000594724 FKBP1AP62942 108 aaKnown RBP18.38■□□□□ 0.53
USE1-205ENST00000594724 CHAF1AQ13111 956 aaPredicted RBP18.38■□□□□ 0.53
USE1-205ENST00000594724 FTSJ3Q8IY81 847 aaKnown RBP18.38■□□□□ 0.53
USE1-205ENST00000594724 DZIP1LQ8IYY4 767 aaKnown RBP18.38■□□□□ 0.53
USE1-205ENST00000594724 CDCA5Q96FF9 252 aa18.38■□□□□ 0.53
USE1-205ENST00000594724 ZBED3Q96IU2 234 aaPredicted RBP18.38■□□□□ 0.53
USE1-205ENST00000594724 CAPNS2Q96L46 248 aa18.38■□□□□ 0.53
USE1-205ENST00000594724 COPRSQ9NQ92 184 aa18.38■□□□□ 0.53
USE1-205ENST00000594724 CEP126Q9P2H0 1117 aa18.38■□□□□ 0.53
USE1-205ENST00000594724 FBXO3Q9UK99 471 aa18.38■□□□□ 0.53
USE1-205ENST00000594724 FRAT2O75474 233 aaPredicted RBP18.37■□□□□ 0.53
USE1-205ENST00000594724 SLC5A1P13866 664 aa18.37■□□□□ 0.53
USE1-205ENST00000594724 DLGAP5Q15398 846 aa18.37■□□□□ 0.53
USE1-205ENST00000594724 MFSD14BQ5SR56 506 aa18.37■□□□□ 0.53
USE1-205ENST00000594724 PRAMEF18Q5VWM3 479 aa18.37■□□□□ 0.53
USE1-205ENST00000594724 LPIN2Q92539 896 aa18.37■□□□□ 0.53
USE1-205ENST00000594724 PITPNM2Q9BZ72 1349 aa18.37■□□□□ 0.53
USE1-205ENST00000594724 IL15P40933 162 aaPredicted RBP18.36■□□□□ 0.53
USE1-205ENST00000594724 MTX1Q13505 466 aa18.36■□□□□ 0.53
USE1-205ENST00000594724 C2orf69Q8N8R5 385 aa18.36■□□□□ 0.53
USE1-205ENST00000594724 GBA2Q9HCG7 927 aaPredicted RBP18.36■□□□□ 0.53
USE1-205ENST00000594724 ECE1P42892 770 aa18.35■□□□□ 0.53
USE1-205ENST00000594724 RBM5P52756 815 aaKnown RBP eCLIP18.35■□□□□ 0.53
USE1-205ENST00000594724 HUNKP57058 714 aa18.35■□□□□ 0.53
USE1-205ENST00000594724 GRIK5Q16478 980 aa18.35■□□□□ 0.53
USE1-205ENST00000594724 ATP2B3Q16720 1220 aa18.35■□□□□ 0.53
USE1-205ENST00000594724 CFAP100Q494V2 611 aa18.35■□□□□ 0.53
USE1-205ENST00000594724 ITPRIPQ8IWB1 547 aa18.35■□□□□ 0.53
USE1-205ENST00000594724 PNMA6EA0A0J9YXQ4 647 aa18.34■□□□□ 0.53
USE1-205ENST00000594724 AOC2O75106 756 aa18.34■□□□□ 0.53
USE1-205ENST00000594724 MTMR14Q8NCE2 650 aa18.34■□□□□ 0.53
USE1-205ENST00000594724 PRMT6Q96LA8 375 aaPredicted RBP18.34■□□□□ 0.53
USE1-205ENST00000594724 TTF2Q9UNY4 1162 aaKnown RBP18.34■□□□□ 0.53
USE1-205ENST00000594724 AOX1Q06278 1338 aa18.33■□□□□ 0.53
USE1-205ENST00000594724 ZBTB7BO15156 539 aaPredicted RBP18.33■□□□□ 0.52
USE1-205ENST00000594724 PANK1Q8TE04 598 aa18.33■□□□□ 0.52
USE1-205ENST00000594724 HHIPL1Q96JK4 782 aa18.33■□□□□ 0.52
USE1-205ENST00000594724 C1orf115Q9H7X2 142 aa18.33■□□□□ 0.52
USE1-205ENST00000594724 CLRN2A0PK11 232 aa18.32■□□□□ 0.52
USE1-205ENST00000594724 SPDYE2BA6NHP3 402 aa18.32■□□□□ 0.52
USE1-205ENST00000594724 SPDYE6P0CI01 402 aa18.32■□□□□ 0.52
USE1-205ENST00000594724 TIMM10P62072 90 aa18.32■□□□□ 0.52
USE1-205ENST00000594724 TFCP2Q12800 502 aa18.32■□□□□ 0.52
USE1-205ENST00000594724 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.32■□□□□ 0.52
USE1-205ENST00000594724 ADORA1P30542 326 aa18.31■□□□□ 0.52
USE1-205ENST00000594724 MOB2Q70IA6 237 aa18.31■□□□□ 0.52
USE1-205ENST00000594724 APOBEC3FQ8IUX4 373 aaKnown RBP18.31■□□□□ 0.52
USE1-205ENST00000594724 WBP1LQ9NX94 342 aa18.31■□□□□ 0.52
USE1-205ENST00000594724 FOXN1O15353 648 aa18.3■□□□□ 0.52
USE1-205ENST00000594724 MYO1BO43795 1136 aa18.3■□□□□ 0.52
USE1-205ENST00000594724 ATP8B2P98198 1209 aa18.3■□□□□ 0.52
USE1-205ENST00000594724 RGMBQ6NW40 437 aa18.3■□□□□ 0.52
USE1-205ENST00000594724 TBC1D22AQ8WUA7 517 aa18.3■□□□□ 0.52
USE1-205ENST00000594724 SERPINA10Q9UK55 444 aa18.3■□□□□ 0.52
USE1-205ENST00000594724 RCAN3Q9UKA8 241 aa18.3■□□□□ 0.52
USE1-205ENST00000594724 PHKA1P46020 1223 aa18.29■□□□□ 0.52
USE1-205ENST00000594724 CRKP46108 304 aa18.29■□□□□ 0.52
USE1-205ENST00000594724 G3BP1Q13283 466 aaKnown RBP eCLIP18.29■□□□□ 0.52
USE1-205ENST00000594724 AIDAQ96BJ3 306 aa18.29■□□□□ 0.52
USE1-205ENST00000594724 ZIC5Q96T25 663 aa18.29■□□□□ 0.52
USE1-205ENST00000594724 DEFB129Q9H1M3 183 aa18.29■□□□□ 0.52
USE1-205ENST00000594724 TDRD3Q9H7E2 651 aaKnown RBP18.29■□□□□ 0.52
USE1-205ENST00000594724 VEZTQ9HBM0 779 aa18.29■□□□□ 0.52
USE1-205ENST00000594724 A0A1B0GUL7 405 aa18.28■□□□□ 0.52
USE1-205ENST00000594724 UBE2Q2LH0YL09 131 aa18.28■□□□□ 0.52
USE1-205ENST00000594724 MAP2K2P36507 400 aa18.28■□□□□ 0.52
USE1-205ENST00000594724 ZNF157P51786 506 aaPredicted RBP18.28■□□□□ 0.52
USE1-205ENST00000594724 MAP2K1Q02750 393 aaPredicted RBP18.28■□□□□ 0.52
USE1-205ENST00000594724 POLA2Q14181 598 aa18.28■□□□□ 0.52
USE1-205ENST00000594724 COL13A1Q5TAT6 717 aaPredicted RBP18.28■□□□□ 0.52
USE1-205ENST00000594724 GNL3LQ9NVN8 582 aaKnown RBP18.28■□□□□ 0.52
USE1-205ENST00000594724 AKAP2Q9Y2D5 859 aa18.28■□□□□ 0.52
USE1-205ENST00000594724 PRKG1Q13976 671 aa18.27■□□□□ 0.52
USE1-205ENST00000594724 TTLL12Q14166 644 aaPredicted RBP18.27■□□□□ 0.52
USE1-205ENST00000594724 CCDC102BQ68D86 513 aa18.27■□□□□ 0.52
USE1-205ENST00000594724 WDR66Q8TBY9 1149 aa18.27■□□□□ 0.52
USE1-205ENST00000594724 SSH3Q8TE77 659 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms