RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 RARSP54136 660 aaKnown RBP15.04■□□□□ -0
SOD3-202ENST00000593742 RABL6Q3YEC7 729 aaPredicted RBP15.04■□□□□ -0
SOD3-202ENST00000593742 LRRC24Q50LG9 513 aa15.04■□□□□ -0
SOD3-202ENST00000593742 TNS4Q8IZW8 715 aa15.04■□□□□ -0
SOD3-202ENST00000593742 C2orf69Q8N8R5 385 aa15.04■□□□□ -0
SOD3-202ENST00000593742 API5Q9BZZ5 524 aaKnown RBP15.04■□□□□ -0
SOD3-202ENST00000593742 WBP1LQ9NX94 342 aa15.04■□□□□ -0
SOD3-202ENST00000593742 MROH5Q6ZUA9 1318 aa15.03■□□□□ -0
SOD3-202ENST00000593742 UBTFL1P0CB47 393 aaPredicted RBP15.03■□□□□ -0
SOD3-202ENST00000593742 MAP2K1Q02750 393 aaPredicted RBP15.03■□□□□ -0
SOD3-202ENST00000593742 PRAMEF18Q5VWM3 479 aa15.03■□□□□ -0
SOD3-202ENST00000593742 BEGAINQ9BUH8 593 aa15.03■□□□□ -0
SOD3-202ENST00000593742 WNT10BO00744 389 aa15.02■□□□□ -0
SOD3-202ENST00000593742 CTCFP49711 727 aaPredicted RBP15.02■□□□□ -0
SOD3-202ENST00000593742 C15orf52Q6ZUT6 534 aaKnown RBP15.02■□□□□ -0
SOD3-202ENST00000593742 VPS37DQ86XT2 251 aa15.02■□□□□ -0
SOD3-202ENST00000593742 CERS5Q8N5B7 392 aa15.02■□□□□ -0
SOD3-202ENST00000593742 FRAT1Q92837 279 aaPredicted RBP15.02■□□□□ -0
SOD3-202ENST00000593742 RIPOR2Q9Y4F9 1068 aa15.02■□□□□ -0
SOD3-202ENST00000593742 KIF16BQ96L93 1317 aa15.01□□□□□ -0.01
SOD3-202ENST00000593742 IL1R1P14778 569 aa15.01□□□□□ -0.01
SOD3-202ENST00000593742 HIBADHP31937 336 aaKnown RBP15.01□□□□□ -0.01
SOD3-202ENST00000593742 LBX1P52954 281 aa15.01□□□□□ -0.01
SOD3-202ENST00000593742 UBE4AQ14139 1066 aa15.01□□□□□ -0.01
SOD3-202ENST00000593742 TTLL12Q14166 644 aaPredicted RBP15.01□□□□□ -0.01
SOD3-202ENST00000593742 SIL1Q9H173 461 aa15.01□□□□□ -0.01
SOD3-202ENST00000593742 TSKSQ9UJT2 592 aa15.01□□□□□ -0.01
SOD3-202ENST00000593742 IQSEC3Q9UPP2 1182 aaPredicted RBP15.01□□□□□ -0.01
SOD3-202ENST00000593742 PITPNM2Q9BZ72 1349 aa15□□□□□ -0.01
SOD3-202ENST00000593742 FRAT2O75474 233 aaPredicted RBP15□□□□□ -0.01
SOD3-202ENST00000593742 ZNF157P51786 506 aaPredicted RBP15□□□□□ -0.01
SOD3-202ENST00000593742 RBM5P52756 815 aaKnown RBP eCLIP15□□□□□ -0.01
SOD3-202ENST00000593742 CHAF1AQ13111 956 aaPredicted RBP15□□□□□ -0.01
SOD3-202ENST00000593742 DLGAP5Q15398 846 aa15□□□□□ -0.01
SOD3-202ENST00000593742 FAM84BQ96KN1 310 aaPredicted RBP15□□□□□ -0.01
SOD3-202ENST00000593742 PCDHAC2Q9Y5I4 1007 aa15□□□□□ -0.01
SOD3-202ENST00000593742 LRRFIP2Q9Y608 721 aaKnown RBP15□□□□□ -0.01
SOD3-202ENST00000593742 THSD7BQ9C0I4 1608 aa14.99□□□□□ -0.01
SOD3-202ENST00000593742 BCAR3O75815 825 aa14.99□□□□□ -0.01
SOD3-202ENST00000593742 MFSD14BQ5SR56 506 aa14.99□□□□□ -0.01
SOD3-202ENST00000593742 RGMBQ6NW40 437 aa14.99□□□□□ -0.01
SOD3-202ENST00000593742 MOB2Q70IA6 237 aa14.99□□□□□ -0.01
SOD3-202ENST00000593742 HHIPL1Q96JK4 782 aa14.99□□□□□ -0.01
SOD3-202ENST00000593742 ZIC5Q96T25 663 aa14.99□□□□□ -0.01
SOD3-202ENST00000593742 MEIS3Q99687 375 aa14.99□□□□□ -0.01
SOD3-202ENST00000593742 TNNQ9UQP3 1299 aa14.99□□□□□ -0.01
SOD3-202ENST00000593742 CLRN2A0PK11 232 aa14.98□□□□□ -0.01
SOD3-202ENST00000593742 EYA2O00167 538 aa14.98□□□□□ -0.01
SOD3-202ENST00000593742 PDE8BO95263 885 aa14.98□□□□□ -0.01
SOD3-202ENST00000593742 HSPA8P11142 646 aaKnown RBP14.98□□□□□ -0.01
SOD3-202ENST00000593742 MAP2K2P36507 400 aa14.98□□□□□ -0.01
SOD3-202ENST00000593742 BRPF1P55201 1214 aaPredicted RBP14.98□□□□□ -0.01
SOD3-202ENST00000593742 PRKG1Q13976 671 aa14.98□□□□□ -0.01
SOD3-202ENST00000593742 CFAP100Q494V2 611 aa14.98□□□□□ -0.01
SOD3-202ENST00000593742 CAVIN4Q5BKX8 364 aa14.98□□□□□ -0.01
SOD3-202ENST00000593742 TDRD7Q8NHU6 1098 aaKnown RBP14.98□□□□□ -0.01
SOD3-202ENST00000593742 CLUAP1Q96AJ1 413 aa14.98□□□□□ -0.01
SOD3-202ENST00000593742 VEZTQ9HBM0 779 aa14.98□□□□□ -0.01
SOD3-202ENST00000593742 RFX5P48382 616 aaPredicted RBP14.97□□□□□ -0.01
SOD3-202ENST00000593742 NOGQ13253 232 aa14.97□□□□□ -0.01
SOD3-202ENST00000593742 PUM3Q15397 648 aaKnown RBP14.97□□□□□ -0.01
SOD3-202ENST00000593742 APOBEC3FQ8IUX4 373 aaKnown RBP14.97□□□□□ -0.01
SOD3-202ENST00000593742 VGLL2Q8N8G2 317 aa14.97□□□□□ -0.01
SOD3-202ENST00000593742 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.97□□□□□ -0.01
SOD3-202ENST00000593742 TTF2Q9UNY4 1162 aaKnown RBP14.97□□□□□ -0.01
SOD3-202ENST00000593742 IPO8O15397 1037 aaKnown RBP14.96□□□□□ -0.01
SOD3-202ENST00000593742 MYO1BO43795 1136 aa14.96□□□□□ -0.01
SOD3-202ENST00000593742 NF2P35240 595 aa14.96□□□□□ -0.01
SOD3-202ENST00000593742 MMP14P50281 582 aa14.96□□□□□ -0.01
SOD3-202ENST00000593742 BCAMP50895 628 aa14.96□□□□□ -0.01
SOD3-202ENST00000593742 PTPN12Q05209 780 aaKnown RBP14.96□□□□□ -0.01
SOD3-202ENST00000593742 PA2G4Q9UQ80 394 aaKnown RBP14.96□□□□□ -0.01
SOD3-202ENST00000593742 PAPPA2Q9BXP8 1791 aa14.96□□□□□ -0.02
SOD3-202ENST00000593742 FAM205AQ6ZU69 1335 aa14.95□□□□□ -0.02
SOD3-202ENST00000593742 UBE2Q2LH0YL09 131 aa14.95□□□□□ -0.02
SOD3-202ENST00000593742 IFIT1P09914 478 aaKnown RBP14.95□□□□□ -0.02
SOD3-202ENST00000593742 SLC5A1P13866 664 aa14.95□□□□□ -0.02
SOD3-202ENST00000593742 TRIM27P14373 513 aa14.95□□□□□ -0.02
SOD3-202ENST00000593742 FKBP1AP62942 108 aaKnown RBP14.95□□□□□ -0.02
SOD3-202ENST00000593742 ATF7IPQ6VMQ6 1270 aa14.95□□□□□ -0.02
SOD3-202ENST00000593742 ARHGAP45Q92619 1136 aa14.95□□□□□ -0.02
SOD3-202ENST00000593742 CCDC102AQ96A19 550 aa14.95□□□□□ -0.02
SOD3-202ENST00000593742 ZBED3Q96IU2 234 aaPredicted RBP14.95□□□□□ -0.02
SOD3-202ENST00000593742 PRDM10Q9NQV6 1147 aa14.95□□□□□ -0.02
SOD3-202ENST00000593742 HDAC5Q9UQL6 1122 aa14.95□□□□□ -0.02
SOD3-202ENST00000593742 AOX1Q06278 1338 aa14.94□□□□□ -0.02
SOD3-202ENST00000593742 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
SOD3-202ENST00000593742 FAM155AB1AL88 458 aaPredicted RBP14.94□□□□□ -0.02
SOD3-202ENST00000593742 SLC10A3P09131 477 aa14.94□□□□□ -0.02
SOD3-202ENST00000593742 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
SOD3-202ENST00000593742 KIF23Q02241 960 aaPredicted RBP14.94□□□□□ -0.02
SOD3-202ENST00000593742 MKRN3Q13064 507 aaKnown RBP14.94□□□□□ -0.02
SOD3-202ENST00000593742 INTS3Q68E01 1043 aaKnown RBP14.94□□□□□ -0.02
SOD3-202ENST00000593742 FBXO33Q7Z6M2 555 aa14.94□□□□□ -0.02
SOD3-202ENST00000593742 PRMT6Q96LA8 375 aaPredicted RBP14.94□□□□□ -0.02
SOD3-202ENST00000593742 DEFB129Q9H1M3 183 aa14.94□□□□□ -0.02
SOD3-202ENST00000593742 FZD1Q9UP38 647 aa14.94□□□□□ -0.02
SOD3-202ENST00000593742 GNAI3P08754 354 aa14.93□□□□□ -0.02
SOD3-202ENST00000593742 FKBP1BP68106 108 aa14.93□□□□□ -0.02
SOD3-202ENST00000593742 GRIK5Q16478 980 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms