RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 COL1A1P02452 1464 aaPredicted RBP27.38■■□□□ 1.97
USF2-204ENST00000593708 F8W031 263 aaPredicted RBP27.37■■□□□ 1.97
USF2-204ENST00000593708 TBC1D8O95759 1140 aa27.37■■□□□ 1.97
USF2-204ENST00000593708 LDLRAD1Q5T700 205 aa27.37■■□□□ 1.97
USF2-204ENST00000593708 CTU1Q7Z7A3 348 aaKnown RBP27.37■■□□□ 1.97
USF2-204ENST00000593708 CENPFP49454 3210 aa27.36■■□□□ 1.97
USF2-204ENST00000593708 DLGAP5Q15398 846 aa27.36■■□□□ 1.97
USF2-204ENST00000593708 ZNF804AQ7Z570 1209 aa27.36■■□□□ 1.97
USF2-204ENST00000593708 MTMR14Q8NCE2 650 aa27.36■■□□□ 1.97
USF2-204ENST00000593708 DEFB129Q9H1M3 183 aa27.36■■□□□ 1.97
USF2-204ENST00000593708 ARAP2Q8WZ64 1704 aa27.36■■□□□ 1.97
USF2-204ENST00000593708 LAMB1P07942 1786 aa27.35■■□□□ 1.97
USF2-204ENST00000593708 TM4SF4P48230 202 aa27.35■■□□□ 1.97
USF2-204ENST00000593708 CCDC57Q2TAC2 916 aa27.35■■□□□ 1.97
USF2-204ENST00000593708 LDHAL6AQ6ZMR3 332 aa27.35■■□□□ 1.97
USF2-204ENST00000593708 FAM9BQ8IZU0 186 aa27.35■■□□□ 1.97
USF2-204ENST00000593708 KAZALD1Q96I82 304 aa27.35■■□□□ 1.97
USF2-204ENST00000593708 ZNF316A6NFI3 1004 aaPredicted RBP27.34■■□□□ 1.97
USF2-204ENST00000593708 PLIN1O60240 522 aa27.34■■□□□ 1.97
USF2-204ENST00000593708 SOX10P56693 466 aa27.34■■□□□ 1.97
USF2-204ENST00000593708 SLC4A10Q6U841 1118 aa27.34■■□□□ 1.97
USF2-204ENST00000593708 ARMC9Q7Z3E5 817 aa27.34■■□□□ 1.97
USF2-204ENST00000593708 ZNF296Q8WUU4 475 aaPredicted RBP27.34■■□□□ 1.97
USF2-204ENST00000593708 C9orf78Q9NZ63 289 aaPredicted RBP27.34■■□□□ 1.97
USF2-204ENST00000593708 ANGEL1Q9UNK9 670 aaKnown RBP27.34■■□□□ 1.97
USF2-204ENST00000593708 CLRN2A0PK11 232 aa27.33■■□□□ 1.97
USF2-204ENST00000593708 SPDYE2BA6NHP3 402 aa27.33■■□□□ 1.97
USF2-204ENST00000593708 ALDH1L1O75891 902 aa27.33■■□□□ 1.97
USF2-204ENST00000593708 SPDYE6P0CI01 402 aa27.33■■□□□ 1.97
USF2-204ENST00000593708 CFAP100Q494V2 611 aa27.33■■□□□ 1.97
USF2-204ENST00000593708 TAF7LQ5H9L4 462 aa27.33■■□□□ 1.97
USF2-204ENST00000593708 CNNM1Q9NRU3 951 aa27.33■■□□□ 1.97
USF2-204ENST00000593708 SUCLG2Q96I99 432 aa27.32■■□□□ 1.96
USF2-204ENST00000593708 PRMT6Q96LA8 375 aaPredicted RBP27.32■■□□□ 1.96
USF2-204ENST00000593708 R3HDMLQ9H3Y0 253 aa27.32■■□□□ 1.96
USF2-204ENST00000593708 ZNF521Q96K83 1311 aa27.32■■□□□ 1.96
USF2-204ENST00000593708 OTOFQ9HC10 1997 aa27.31■■□□□ 1.96
USF2-204ENST00000593708 FKBP1AP62942 108 aaKnown RBP27.31■■□□□ 1.96
USF2-204ENST00000593708 SPRYD7Q5W111 196 aa27.31■■□□□ 1.96
USF2-204ENST00000593708 PUS3Q9BZE2 481 aaKnown RBP27.31■■□□□ 1.96
USF2-204ENST00000593708 SRCIN1Q9C0H9 1055 aa27.31■■□□□ 1.96
USF2-204ENST00000593708 NBPF7P0C2Y1 421 aaPredicted RBP27.3■■□□□ 1.96
USF2-204ENST00000593708 CLMNQ96JQ2 1002 aa27.3■■□□□ 1.96
USF2-204ENST00000593708 GYG1P46976 350 aa27.29■■□□□ 1.96
USF2-204ENST00000593708 SREBF2Q12772 1141 aa27.29■■□□□ 1.96
USF2-204ENST00000593708 HPS5Q9UPZ3 1129 aa27.29■■□□□ 1.96
USF2-204ENST00000593708 FAM205AQ6ZU69 1335 aa27.28■■□□□ 1.96
USF2-204ENST00000593708 MAP3K11Q16584 847 aa27.28■■□□□ 1.96
USF2-204ENST00000593708 VEZTQ9HBM0 779 aa27.28■■□□□ 1.96
USF2-204ENST00000593708 MKI67P46013 3256 aaKnown RBP27.28■■□□□ 1.96
USF2-204ENST00000593708 UTYO14607 1347 aa27.27■■□□□ 1.96
USF2-204ENST00000593708 GPR25O00155 361 aa27.27■■□□□ 1.96
USF2-204ENST00000593708 TDRD7Q8NHU6 1098 aaKnown RBP27.27■■□□□ 1.96
USF2-204ENST00000593708 PPP2R3BQ9Y5P8 575 aa27.27■■□□□ 1.96
USF2-204ENST00000593708 UBE4AQ14139 1066 aa27.26■■□□□ 1.95
USF2-204ENST00000593708 NOM1Q5C9Z4 860 aaKnown RBP27.26■■□□□ 1.95
USF2-204ENST00000593708 NBPF12Q5TAG4 269 aaPredicted RBP27.26■■□□□ 1.95
USF2-204ENST00000593708 FAM84BQ96KN1 310 aaPredicted RBP27.26■■□□□ 1.95
USF2-204ENST00000593708 CFHR5Q9BXR6 569 aa27.26■■□□□ 1.95
USF2-204ENST00000593708 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.26■■□□□ 1.95
USF2-204ENST00000593708 BRCA2P51587 3418 aa27.25■■□□□ 1.95
USF2-204ENST00000593708 MYO1BO43795 1136 aa27.25■■□□□ 1.95
USF2-204ENST00000593708 ZEB1P37275 1124 aaPredicted RBP27.25■■□□□ 1.95
USF2-204ENST00000593708 MFSD14BQ5SR56 506 aa27.25■■□□□ 1.95
USF2-204ENST00000593708 BICC1Q9H694 974 aaKnown RBP27.25■■□□□ 1.95
USF2-204ENST00000593708 RIPOR2Q9Y4F9 1068 aa27.25■■□□□ 1.95
USF2-204ENST00000593708 RBM5P52756 815 aaKnown RBP eCLIP27.24■■□□□ 1.95
USF2-204ENST00000593708 ANKRD44Q8N8A2 993 aa27.24■■□□□ 1.95
USF2-204ENST00000593708 SLC10A4Q96EP9 437 aa27.24■■□□□ 1.95
USF2-204ENST00000593708 WNK4Q96J92 1243 aa27.24■■□□□ 1.95
USF2-204ENST00000593708 HIBADHP31937 336 aaKnown RBP27.23■■□□□ 1.95
USF2-204ENST00000593708 RASA3Q14644 834 aa27.23■■□□□ 1.95
USF2-204ENST00000593708 RABL6Q3YEC7 729 aaPredicted RBP27.23■■□□□ 1.95
USF2-204ENST00000593708 MRPL50Q8N5N7 158 aaKnown RBP27.23■■□□□ 1.95
USF2-204ENST00000593708 TTF2Q9UNY4 1162 aaKnown RBP27.23■■□□□ 1.95
USF2-204ENST00000593708 PPP1R12BO60237 982 aaPredicted RBP27.22■■□□□ 1.95
USF2-204ENST00000593708 GRIK5Q16478 980 aa27.22■■□□□ 1.95
USF2-204ENST00000593708 SPDYE2Q495Y8 402 aa27.22■■□□□ 1.95
USF2-204ENST00000593708 CDAN1Q8IWY9 1227 aa27.22■■□□□ 1.95
USF2-204ENST00000593708 IGF2BP3O00425 579 aaKnown RBP eCLIP27.21■■□□□ 1.95
USF2-204ENST00000593708 SLC34A2O95436 690 aa27.21■■□□□ 1.95
USF2-204ENST00000593708 ZBTB48P10074 688 aaPredicted RBP27.21■■□□□ 1.95
USF2-204ENST00000593708 GJA5P36382 358 aa27.21■■□□□ 1.95
USF2-204ENST00000593708 PKN2Q16513 984 aaKnown RBP27.21■■□□□ 1.95
USF2-204ENST00000593708 SUPT20HL1Q3ZLR7 823 aa27.21■■□□□ 1.95
USF2-204ENST00000593708 IFNL1Q8IU54 200 aa27.21■■□□□ 1.95
USF2-204ENST00000593708 MANSC4A6NHS7 340 aaPredicted RBP27.2■■□□□ 1.94
USF2-204ENST00000593708 FKTNO75072 461 aa27.2■■□□□ 1.94
USF2-204ENST00000593708 USP2O75604 605 aaPredicted RBP27.2■■□□□ 1.94
USF2-204ENST00000593708 LRRC24Q50LG9 513 aa27.2■■□□□ 1.94
USF2-204ENST00000593708 ZNF70Q9UC06 446 aaPredicted RBP27.2■■□□□ 1.94
USF2-204ENST00000593708 SERPINA10Q9UK55 444 aa27.2■■□□□ 1.94
USF2-204ENST00000593708 IQSEC3Q9UPP2 1182 aaPredicted RBP27.2■■□□□ 1.94
USF2-204ENST00000593708 MROH5Q6ZUA9 1318 aa27.19■■□□□ 1.94
USF2-204ENST00000593708 VGLL2Q8N8G2 317 aa27.19■■□□□ 1.94
USF2-204ENST00000593708 TDRD3Q9H7E2 651 aaKnown RBP27.19■■□□□ 1.94
USF2-204ENST00000593708 FBXO33Q7Z6M2 555 aa27.18■■□□□ 1.94
USF2-204ENST00000593708 DZIP1LQ8IYY4 767 aaKnown RBP27.18■■□□□ 1.94
USF2-204ENST00000593708 KLHDC4Q8TBB5 520 aa27.18■■□□□ 1.94
USF2-204ENST00000593708 TEPSINQ96N21 525 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms